Aaur009958.1
Basic Information
- Insect
- Augochlorella aurata
- Gene Symbol
- retn
- Assembly
- GCA_028455555.1
- Location
- CM052164.1:15655114-15673809[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-20 7.5e-17 61.4 0.0 15 89 12 84 7 84 0.94 2 2 6 1.4e+04 -3.6 0.0 18 32 353 368 347 369 0.76
Sequence Information
- Coding Sequence
- ATGCGAAACGCAACTGATCACAATCCACGACAGAAATATGGCACACCGATCAATCGACTGCCGATCATGGCGAAATCGGTGCTGGATCTCTACGAGCTGTACAACCTGGTGATCGCCCGAGGCGGGCTAGTCGACGTAATTAACAAGAAGCTCTGGCAGGAAATCATCAAAGGCCTCCACCTGCCATCGAGCATCACTTCCGCCGCGTTCACTCTACGCACCCAGTACATGAAGTACCTATATCCGTACGAATGCGAGAAGAGACGACTATCAACTCCAGCCGAACTGCAGGCAGCGATCGACGGGAACCGACGAGAAGGTCGACGCAGCAGTTACGGTACTTATGGGGGTGGCGGAAGCAGTGGAGCCGAAATGGGGCAACGAAATCCGCATGCACCGAGCTCGCTAGCGTTGCATGCGCAAATATCACCGCTATCTTTGGTTACTGCTGTAGCAGCTGGTGGCCAGCACCATGGACAGCAGTCTTTGGTGAACGGTAGTGCAGCGCATACCCCATTGCCGCATCATCCTCACCATCCGCAGCACCCTCAGGGATCATTGGGGCAGCCACAGACTGCCGGGCCTATTCCCGGAATGGCGCCGTCCGAATTCGAGGCGCGCATGGTAGAATACGTAAAACTGCTAAACAAAGAGCTGAGAAGCGCTGGCGCGGGCACTCCGCCCCCCATGATTAACCGGCAAGGCAGCGCGTCGCCCCCTTCGTCCACTCCGCCGAGGGATGGGGGTTTCAGCGCATTGGAAATGTCTCGGCTCACGCTTTGGAACATGTACAACAACAACAATACACTCTATCCCGGAGTGGGACATCAACCACCCCTATCTCCACAGCCCTCCCACTCGCCGGTACCTCCGGCATCCAGCCCGGAACCTCAGAGGGAAGCCCTCGATCTTGGGCTCAGGTCTTCACCTGTGTCGTCCTCACCAGCAAGACAAAGTTCACCCTCCTCCGGCGGCAGTCTGCAAGTTAAAAGGGACCCGGACATAATCGGGTTGTCCGGACCTCCCCCGGCGAAGAGACTGCTCTCGGACGATGACAGCCCCTTGGAAAAGAACGCACCCACTATTCAAGGCACGCACATTAAAATTTCCAGTCGAGGAGACGGAAAGAACGGGGACAATTCCTTGGTGGTCAGCATGGAGTTGAACGGGGTAATGTACCAAGGCGTATTGTTCGCCCAGCCAGACAGTAGGAGCAGCGCGGGTAGCAACAACACGGCAAAGGCATCTCGGAGCATGGTTTCGTGA
- Protein Sequence
- MRNATDHNPRQKYGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGTYGGGGSSGAEMGQRNPHAPSSLALHAQISPLSLVTAVAAGGQHHGQQSLVNGSAAHTPLPHHPHHPQHPQGSLGQPQTAGPIPGMAPSEFEARMVEYVKLLNKELRSAGAGTPPPMINRQGSASPPSSTPPRDGGFSALEMSRLTLWNMYNNNNTLYPGVGHQPPLSPQPSHSPVPPASSPEPQREALDLGLRSSPVSSSPARQSSPSSGGSLQVKRDPDIIGLSGPPPAKRLLSDDDSPLEKNAPTIQGTHIKISSRGDGKNGDNSLVVSMELNGVMYQGVLFAQPDSRSSAGSNNTAKASRSMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_00183087;
- 80% Identity
- -