Apur011363.1
Basic Information
- Insect
- Augochlora pura
- Gene Symbol
- retn
- Assembly
- GCA_028453695.1
- Location
- CM052109.1:6844102-6865049[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.6e-20 1.2e-16 60.7 0.0 16 89 55 126 35 126 0.93
Sequence Information
- Coding Sequence
- ATGGCTGTCGAAGCGGCGACCCTTGCTTCACGAGGTGTTACGGGGTCCTTCAACCTTCGACATCGACGCGAAGGCAGAAGCGGCGCGTTAAAATTCCTCGGATTTTGTAGAAGCAAGCGGGAGGCGATGGAACGGCGTAATGCTGGACGAAAGGGTCTCTTCTCCGGCACACCGATCAACCGGCTGCCGATCATGGCGAAATCGGTGCTGGATCTCTACGAGCTGTACAACCTGGTGATCGCCCGAGGCGGCCTAGTCGACGTAATTAACAAGAAGCTCTGGCAGGAAATCATCAAAGGCCTCCACCTGCCATCGAGCATCACTTCCGCCGCGTTCACTCTGCGCACCCAGTACATGAAATACTTGTATCCATACGAGTGCGAGAAGAGACGACTATCGACACCAGCGGAACTGCAAGCAGCGATCGACGGGAATCGGCGAGAAGGTCGGCGCAGCAGTTACGGGGCTTATGGGGGTGGCGCAGGCAGCGCAGCCGAAATGGGCCAACGAAATCCGCATGCACCGAGCTCGCTCGCGTTGCACGCGCAGATGTCACCGCTGTCGTTGGTGACCGCTGTAGCTGCCGGTGGCCAGCACCACGCGCAACAGGCTTTGGTGAACGGAAGTGCAGCGCACACCCCATTACCCCATCATCCACACCATCCTCAGCACCCTCAGGGATCGTTGGGACAGCCGCAGAATGCCGGACCTATTCCCGGAATGGCGCCGTCCGAATTCGAGGCGCGCATGGTGGAGTACGTGAAACTGCTGAACAAAGAGCTAAGAAGCGCTGGCGCGGGCACCCCGCCCCCAATGATCAACCGGCAAGGCAGCGCGTCGCCCCCTTCGTCCACGCCGCCGAGGGATGGTGGTTTCAGCGCGCTGGAAATGTCTCGACTCACGCTCTGGAACATGTACAACAACAACAACACCCTCTATCCCGGAGTCGGGCATCAGCCGCCCCTATCGCCGCAGGCTTCGCACTCGCCGGTACCTCCGGCATCTAGCCCGGAACCTCAGAGGGAAGCCCTCGATCTTGGGCTCAGGTCGTCGCCCGTATCCTCGTCACCGGCAAGACAAAGTTCACCCTCCTCGGGCGGCAGCCTCCAGGTTAAAAGGGACCCGGACGTAATCGGGTTATCCGGACCTACCCCGGCGAAGAGACTGCTCTCCGACGATGACAGCCCCCCGGAAAAGAACGCACCCTCCATCCAAGGCACGCACATTAAAATTTCCAATCGAGGAGACGGAAGGAACGGTGACAATTCTCTGGTGGTCAGCATGGAATTGAACGGAGTGATGTACCAAGGTGTATTGTTCGCCCAGACAGACAGGAGCAACGCCGCTAGTAACAATACGGCAAAAGCATCCCGGAGCATGGTTTCGTGA
- Protein Sequence
- MAVEAATLASRGVTGSFNLRHRREGRSGALKFLGFCRSKREAMERRNAGRKGLFSGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYGGGAGSAAEMGQRNPHAPSSLALHAQMSPLSLVTAVAAGGQHHAQQALVNGSAAHTPLPHHPHHPQHPQGSLGQPQNAGPIPGMAPSEFEARMVEYVKLLNKELRSAGAGTPPPMINRQGSASPPSSTPPRDGGFSALEMSRLTLWNMYNNNNTLYPGVGHQPPLSPQASHSPVPPASSPEPQREALDLGLRSSPVSSSPARQSSPSSGGSLQVKRDPDVIGLSGPTPAKRLLSDDDSPPEKNAPSIQGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTDRSNAASNNTAKASRSMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_00183743;
- 80% Identity
- -