Atex013583.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Atta texana
Gene Symbol
Hr39
Assembly
GCA_004480015.1
Location
QEPB01038334.1:4812-8857[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 3 2.6e+04 -5.5 7.2 131 159 39 67 18 100 0.53
2 5 3 2.6e+04 -5.5 9.2 83 163 302 390 223 425 0.59
3 5 3 2.6e+04 -7.8 9.6 76 148 431 507 398 535 0.41
4 5 3.6e-08 0.00031 20.8 0.0 1 22 602 623 602 635 0.91
5 5 1e-70 9e-67 226.8 0.0 181 408 771 992 731 992 0.87

Sequence Information

Coding Sequence
ATGTCAGAGCAAAACGGGCCCAGCGAGGGCCCAGGGCCAGGGCCCGGTTCGGATTCGAGCTGGTGGCAAAGCACGCAGACTTGGAAGTCGTCAGCAGCCGCCTCGTCGTCGACTTCATCGACTCCCACTTCAGGGTCCGTCTCTGTCTCCTGCTCTGCGTCCAGCTCATCGACGAGCTCCTCCACCTCGATCAACTCGTCCGCGACCTGTTGTCCCTCGTCGTGTATCGGCGTGTCTTGCACGATGAGTCCAAGCCGTTCCACGGAAACGGGGAAAAATGTATCCGTCACTACTATTAACGTACCGCCCAATCAAGAAATGCATGATGCTAAAGGAGTATGTAAATATCTCGGGGGGCAAAATGGCGTGACAGTATCGGTGGTATCGACCTCGGTACTGGGATGTGGAAACGCGAATGCCGTCCCAACAAGCGGAATCTGTACGAACACGGGGCATAGTATCGGTATCGGAATTGGTGGCATCCTCGCTGCGAACGCAGCCGATATCGATGATCCTGAGGACAGCGATGGCGAGATCAGTAAGATTGACTTTCGAGGTGTCAATCTACGTTCGAAGAAGAAACGCGACGTATCGGGTAATCAGAATGGCGACAAGATCGGTGACGGAGAAGCAAACGGCGACGGCGGGGGTTGCTGCGATGATAATTCGCAACAGCAACCTGAGAGGCCCATGTCATGGGAAGGTGAATTATCGGATCAAGAAATGTCTTCCAATACAATTACTAATCAGGACCACAATGAGGAAACGTCTATGGAAGGAGTTCAAGTATGTAGCACGAGTCCTGGGCCTATGGAACAGAAGTTTCCTATTAAGTCAGAACCGGATTTTCGATCTAGTCCAGGTTTCACAATAGGATCTTTTCACGATGGTGGATTGCCCATGACACACAATCAACAATTgcaacaacagcaacaacaacaacgCGGTATCGAAAACCTCGAACAAACTCAACAGAGCGATCTACCACTTCTTGTAGGCAAGCTTCTCGGTGGATACAACAATTCAACGCCTAATCATAGTCCCGTCCTCAATCCGCGACATCATCTAACTAAACATAGTCATACTAGATCGCAGGTGCCGTCACCAGATTCCGCCATTCATTCTGCGTATAGCGTCTTCAGTTCACCGACACAGAGTCCTCACGCAGCACGACATTCCGCCTTAGGAGCGGGTAGTCCGATACCCTCCTCGTCGTTGTCCCTCTCTCGACACAGCTTCAACAACTCGACTTCTTCGTTATCTCTATCGTTGTCGCATTCGCTTTCGAGGAACAATTCTGACGCTTCCAGTAGCTGCTACAGCTACGGTTCGCTTAGTCCGCCTACACATTCACCCGTCCAGCAGCCGAGACATCCGCATTCACATTCACAACATCATCAGCATCAAGTGGCGCAAGGTAGTCCACTGCATCTACCAGCCTCGTCCGCAGTTGCCGCACATCATTATTCATCCTCTTCCATACCAGGTTCGGAATTGTCACCGGACGGCCATCCCGTTGCGGAAGATCAGGAAGACTGTAGATTACCCTCGGCGCCATCGGGTATCTCCACCAGGCAACAATTAATTAACAGTCCCTGCCCGATTTGCGGTGACAAGATAAGCGGCTTCCATTATGGCATCTTCTCGTGTGAATCGTGCAAGGGATTTTTCAAGCGCACCGTCCAGAATCGTAAGAACTATGTGTGCCTTAGAGGCGCAGGTTGTCCGGTCACCGTGGCCACGAGGAAAAAGTGCCCAGCCTGCCGCTTCGATAAGTGCCTCACTATGGGTATGAAGCTCGAGGCGATCAGGGAGGATCGTACCAGAGGCGGTAGAAGCACTTATCAATGTACCTATACTCTGCCAAATCTCGTTGGTAGTCCTGCTGGTATGACCAGTGAAAAACTGACGACGGCAGGCAATTGCAGCCCGGCACCGGCCGGTAGCGAGCACCATTATTCTGTTAGATATCATTCAAATCATTCTTACAAGATGCAAGTAGTACCTCAACTTTTGCAAGACATCATGGATGTAGAACATCTTTGGCATTATAACGATAACGATCGGATAACCGGTAGTGGAGGAATACTTGGAAGTGTAAGGAATACCGGTGGTGACAGTCTGCTCAGTGGACCTGGAAGTGGTCCAGCGCTCAGCGGCACTGGAACTGCGGCCAATATTGGCGTCGGAAATAACGGAGGTGCAGTGGAATGTTCGTCGAATGACTCTAGCAATGTCGATACTAATAGTAGAAGGGGAGAAACGGCGAGTCCCACTGATTCGATCTTAACGGGGGCGTCCGATCAACATTCCACAAATGGCAATACCactaataatagtaattctCAAATTGCTAGTAATTCCAACGGTAATTCAGCGCAACATCCAGACTTTCTATCTAATCTGTGCAACATCGCGGATCATCGGCTCTATAAGATCGTCAAGTGGTGCAAAAGTTtgccattatttaaaaatatttcaattgatgATCAAATCTGTTTGTTGATTAACTCTTGGTGTGAGCTACTACTTTTCTCTTGCTGTTTTCGCAGCATGAGTACTCCCGGTGAGATAAGAGTGTCTCTCGGCAAGTCGATTACTTTAGAACAGGCAAGACAGCTTGGTTTAGCGACTTGCATCGAGAGGATGCTCACTTTTACCAATAATCTGCGAAGACTGAGAGTAGACCAATATGAATATGTTGCAATGAAGGTGATCGTGCTGTTAACATCCGATACAAGCGAATTAAAAGAGCCTGAAAAGGTCAGAGCTTCTCAAGAAAAGGCACTTCAAGCACTCCAGCAATATACAATCGCGAGGTACCCAGAAATGCCTGCCAAATTTGGTGAATTATTGTTGAGAATTCCAGATCTGCAAAGAACATGTCAAGCAGGAAAAGAATTGCTCAGTGCAAAACGTGCCGAGGGAGAAGGCAGCTCGTTTAACCTTTTAATGGAATTGTTGAGAGGAGATCACTGA
Protein Sequence
MSEQNGPSEGPGPGPGSDSSWWQSTQTWKSSAAASSSTSSTPTSGSVSVSCSASSSSTSSSTSINSSATCCPSSCIGVSCTMSPSRSTETGKNVSVTTINVPPNQEMHDAKGVCKYLGGQNGVTVSVVSTSVLGCGNANAVPTSGICTNTGHSIGIGIGGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGDKIGDGEANGDGGGCCDDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPGFTIGSFHDGGLPMTHNQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNNSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHSHSQHHQHQVAQGSPLHLPASSAVAAHHYSSSSIPGSELSPDGHPVAEDQEDCRLPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLTMGMKLEAIREDRTRGGRSTYQCTYTLPNLVGSPAGMTSEKLTTAGNCSPAPAGSEHHYSVRYHSNHSYKMQVVPQLLQDIMDVEHLWHYNDNDRITGSGGILGSVRNTGGDSLLSGPGSGPALSGTGTAANIGVGNNGGAVECSSNDSSNVDTNSRRGETASPTDSILTGASDQHSTNGNTTNNSNSQIASNSNGNSAQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLTFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01267641;
90% Identity
iTF_00885153;
80% Identity
iTF_00182677;