Basic Information

Insect: Athalia rosae
Gene Symbol: -
Assembly: GCA_000344095.2
Location: NW:1504953-1511651[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 6.3 4.1e+02 1.0 3.2 2 23 283 305 282 305 0.95

2 21 0.033 2.1 8.2 1.8 1 23 402 424 402 424 0.98

3 21 0.00057 0.037 13.8 0.6 1 23 473 496 473 496 0.96

4 21 0.0022 0.14 11.9 0.2 2 20 549 567 548 569 0.92

5 21 0.0029 0.19 11.5 3.4 2 23 610 632 609 632 0.96

6 21 0.0014 0.09 12.5 0.1 1 23 674 696 674 696 0.97

7 21 0.00046 0.03 14.0 0.1 1 23 702 724 702 724 0.97

8 21 1.2e-05 0.00081 19.0 0.9 2 23 766 788 766 788 0.94

9 21 0.00025 0.017 14.9 1.6 2 23 796 818 796 818 0.98

10 21 6.9e-06 0.00046 19.8 0.6 2 23 827 849 826 849 0.96

11 21 0.00016 0.011 15.5 0.6 1 23 857 879 857 879 0.93

12 21 0.086 5.7 6.9 0.1 2 20 936 954 935 954 0.95

13 21 0.0084 0.55 10.1 0.3 2 23 974 995 973 995 0.95

14 21 4.4e-05 0.0029 17.3 0.8 1 23 1022 1044 1022 1044 0.98

15 21 4.4e-05 0.0029 17.2 1.1 1 23 1066 1088 1066 1088 0.97

16 21 1.2 76 3.3 0.6 2 20 1107 1125 1106 1127 0.92

17 21 0.054 3.6 7.5 0.7 2 23 1185 1207 1184 1207 0.95

18 21 0.00019 0.012 15.3 0.2 1 23 1236 1259 1236 1259 0.96

19 21 2.1e-06 0.00014 21.4 0.7 2 23 1266 1287 1265 1287 0.97

20 21 0.013 0.85 9.5 1.5 1 23 1292 1315 1292 1315 0.97

21 21 3.5e-06 0.00023 20.7 1.9 1 23 1350 1373 1350 1373 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	6.3	4.1e+02	1.0	3.2	2	23	283	305	282	305	0.95
2	21	0.033	2.1	8.2	1.8	1	23	402	424	402	424	0.98
3	21	0.00057	0.037	13.8	0.6	1	23	473	496	473	496	0.96
4	21	0.0022	0.14	11.9	0.2	2	20	549	567	548	569	0.92
5	21	0.0029	0.19	11.5	3.4	2	23	610	632	609	632	0.96
6	21	0.0014	0.09	12.5	0.1	1	23	674	696	674	696	0.97
7	21	0.00046	0.03	14.0	0.1	1	23	702	724	702	724	0.97
8	21	1.2e-05	0.00081	19.0	0.9	2	23	766	788	766	788	0.94
9	21	0.00025	0.017	14.9	1.6	2	23	796	818	796	818	0.98
10	21	6.9e-06	0.00046	19.8	0.6	2	23	827	849	826	849	0.96
11	21	0.00016	0.011	15.5	0.6	1	23	857	879	857	879	0.93
12	21	0.086	5.7	6.9	0.1	2	20	936	954	935	954	0.95
13	21	0.0084	0.55	10.1	0.3	2	23	974	995	973	995	0.95
14	21	4.4e-05	0.0029	17.3	0.8	1	23	1022	1044	1022	1044	0.98
15	21	4.4e-05	0.0029	17.2	1.1	1	23	1066	1088	1066	1088	0.97
16	21	1.2	76	3.3	0.6	2	20	1107	1125	1106	1127	0.92
17	21	0.054	3.6	7.5	0.7	2	23	1185	1207	1184	1207	0.95
18	21	0.00019	0.012	15.3	0.2	1	23	1236	1259	1236	1259	0.96
19	21	2.1e-06	0.00014	21.4	0.7	2	23	1266	1287	1265	1287	0.97
20	21	0.013	0.85	9.5	1.5	1	23	1292	1315	1292	1315	0.97
21	21	3.5e-06	0.00023	20.7	1.9	1	23	1350	1373	1350	1373	0.97

Sequence Information

Coding Sequence: ATGCGAAATACCGTTGCAGTCTCCTGTTTCAAAATGGATGATGTGGTGTCAATAccgaacgttgaaaatatctgCCGACTGTGTTTGTCGCCGGACGATCCAAAGTCCTCAATTTTTGACGGAGATGATTCGTCGGTGCCGCTTTCCTGCAAGATTCAAGCCTGCTTAGCTATTCAGaTCTCATCTACCGATAAATTATCGACGCTTATATGCCGACGATGCATAACAAATGTAAACCAATGGCATAGTTACAGAGAATCTTGCCTTAAAGCTCAAGACAAACTTCAACAGTGGCAGATGCAGCAGATGCCCATTCATACGGGACTAACCATAAAACAAGAGCCAATTGATCTAGATTTTGAAACAGATCAGATAGAAACCATAACAGATCCACTTGATATGACTCATGATGAGCAAAATGAAaACGATGGTGTATGGGCTCTGCATATTACCAATGAGCAATCAGTCCAATCTGagaaggaaatggaaaaacagaCAAAAAGTGAAGTCGCTTGCAGAAGAAGAACCAGGAGCTTTGGTATGCCAATATCTCCGCCAACTATGCCGCAGGAATCTGAAAGAAACACAACAGTCTCAAAACCCTACTGTACAATAGAAGTTAAAGATGAACCATTACAAGAAGATGAATATGATTCTAATATAGAAATTGAATCTGTAACGGGTGGTGAAATTTTGCCCAACCCTGTAGCTGCGATATGTCCTACCGAAGATAGAGTTATGGAAGCTGATTCTACGCAGAGGTCAAACTCTGTGACTTTcaaaactaagaaaaaagtaaaaagaggaCCTCATACGCATTTGCGGAACAAACACCagttcagaaaaaaatgtgttttcTGTCAAATAAATCTTCACTCCAAATATTCTTACGGAAAACACATGGAGAGGTTTCATACTCCTCTCCCTGAGTCCGAACAAATCGATAACAAGGCAAACTTGAAGTTGGCCATCAAACAGAAGGCTCAAAGTACAAAGTCTCAATCGGCAGCATTTCAAGATGAACACagatttttcacgaataatCTCCAAGAGGAGAATAGTGCCGATGAATTGACGAGCTGCAACAAAGATGGCGATGAAGAAATGATCGAGGATGTAGAAGATGAAATCAATAAAATGGACAGGAATTCAGAGACCCCCCTGTCCCAAGTCCAGCAAAATATCATCGGTCAACTGAAAACATACTCTTGTTATTCTTGCAAACAAGTTTTTCCTGATCGAAGAACTACCTTAAATCATCTCAGACAGCATTTACCAGACCTACGCCCATTCACCTGTGTGGCTTGTCTTACACAATTCTCAGATCGTTTGATTTACAAAAATCACTGTTATACTTCTTTTGAGTGCGCCATGAAGATAGCTATTGTTGAGCCAAAGTCTGGTttagagaaatatttcacttgTAATATGTGCTCCAAGTCTGTGGCTAATAGACAAGAATTGTTGAACCATCTCACCTCGCAACATTCTGACGACCAACTCGCCAATGAAACACCATCATCCTCTAACCAAACTCCGGCAAAGATGTTGAGAAAAGACCCTACGTCAACACCTGCTCCTCTGAATTGGTCACACTTACATTTACCTGGTCCTTATGTAAATGGGAATCCCGCATTTAATCTTCCGTGTAGTTTATGCGGAATGATTTATAAACATAAACGAAATTTGTTGGATCATCAAACAATTTGTAGCCAACGTCCTGCAAGTGAACGAACCAGTTATGCTTGTGTACATTGCAGGAtgacttttcttttattcagaAAGTATACCAGCCATTTGTATAGCGTACACAGTACAAGTGAAATTACTTGTTCGCTTTGTCGCAAGAAATTCAATACGCCAACTGATTTTTTGGttcatcataaaaaaaatcatccgctTGAAGGCGGACAAGTTGATGGGGAAAGAGCTTCGGTTAACCAGGAAAATTCCCTAAAAGAGTGGAACGATTATGAGGAGGAGTTACATACGAATGAGTCGAGAAGTAGCAGGCAAAAGTACAGCTGTGCATTATGTGGTCAAGAGTTTCCAACTAGAACAGAACTAGGGGAGCACAGGAATCTGCATTTAAAAGTTAAAATATATTCGTGTGTCATTTGTCGTAGTATGTTCAGTAGCGCTGGGGCTCTAGAAGTTCACATGAAAGACCATGGTATTGAGGATCCCGCCGAACAAAGTGCTCATACTTCTTATGTGGAATACGAAGGGGCGGAAGACACCAAAGATATCGCTCTATTAGACAATTCACGCGACTCGAATTCTGAGTCCGGTGAAACATGTAACATTTGTAACAAGAGTTTCACAAGTTCTGCCAACCGGAAGAGACACATTGCGAACGTTCACAAGAACAGTAAAAACCGTCGGAAATGCACCGAATGCAGAAGAGtatttacaaagaaaaatgcGTTCGAATATCACGTCAGAACTGAACACAAGCATCCATCCACCTCCTCGATAACTTGCCCGATGTGTCCTCAAACATTCACGACtagaagaaatttgaatttgcatTACGAAACTACTCACATAAATCAAGTCGACGCGTTGCATGAATGCGACATATGCGGAAAACAGTTCAAGGAAGATTCGTCTCTGAAAATTCACAGGGGGTGGCACACGCGAAAGACTCATAGATTGATCAGTGATGTCAAAGGTCTGAACAAGTCCCTACCCATACTACAGTCACAGGATATTTTTAACGACTCTACAGTATCCGTACCGAAACCTGCAAGAGCTAGAAAATCGTTTCCAAACTCGCCACCGTCGAAACCAAAACCTCAGTTACAGTGTCAAGTTTGCGACGACAAGTTCATTGACGTTGGTGATTTGAGAAAACACCTTTGGGATGTTCATTGCTCTCgcaataaaaacgaaaaaaattatacaacaaGCGATCTGCAGTGCGAATTGTGTACTCATACGTTACCCGATAAACCCAGTTTGGAGAGACACTTGGAATGGCATGTGGAAAATCCTATATTGAGCGACTCTAAGAACGGTGTTAAGAGAAAGAGATATTACACGCCGAGAGACCTAAGAACCTACCCCTGTGAAATATGCGGTAACTTTTATACGTCTCGAAGAAGTTTATTGAGGCATCAAAAGCTACACAAAGTTAGTACCACTGCTGCTACACGGTTTCAAGCCACGGTAAAAAAACCGCTGGCTAATCAGTTCCCGTGCAATGTTTGCAACAAGATATTCGACACTTCGATCAAACTTCGCAAGCATAGACTCTACCACCTTGTAAATTCCGCAGAAAACAAGCGTGATTCGATTGTTGAAAAACCGGAACTCCAGTGCAACCTCTGCTCCAAATATCATACTTCCAAAATAGATCTGCAGCTTCATTTGGCAAAGAATTGCCCCTATCGGTCCCAAGAAACATCAGGTCCTCGTATCAAACGTCGCAAAATCATATCGACTGTAGAAAGCAATGCCCCTGTTCATTTTGAGCAGCCAAAACCTGTACCTGTATcttcaaaatcaaatttcaacctcTCCGTTGGCTGGCGTATGAAAAAGATGTGGAATTGCAGCCTTTGTCtaaaatcatttcttggaAGGAGCACTTTGTACAAGCATCAAATGTCTGTTCACGGAAAAGATGCATTTCGTCAGGCAGCATTGCTTGCAAAAAAGAAGTCAGTTTCTAAACCCCTTCCGTCGTTGGAGTCTAGCCGTTTCCCATGCACTGTATGCACCAAGGATTTTCCTACCGCTTTGAGCCTGAAGCTTCATATGTCATCACTTCACAAAGACTCAAAACCAAAAAGCTGCAACATTTGTGGTAAAACTTTCAGCAGCAACGTGGGCATAAGAAATCATATGCAGACACACTCTACCAGTACTTACAGTTGCAACCTATGCCAACGATTATTCCGTACGCGTCAAGCTGTTTACATGCACGTTAGGCGTCAGCATCCAGATGAATATCTAATAatggaagacgaaaaaagtcaGTTATGTtccgaaataatttccaaacCTGAAATTCCCATTCCTAAAACTAACGTGCAGACATCTTTTCGTTGTGAGTATTGTAATAAGAGCTTTGACACTAACAAGGGGTTGAGAGTTCATGTTAAGAAAAGTCATTCCATGCATAACTAG
Protein Sequence: MRNTVAVSCFKMDDVVSIPNVENICRLCLSPDDPKSSIFDGDDSSVPLSCKIQACLAIQISSTDKLSTLICRRCITNVNQWHSYRESCLKAQDKLQQWQMQQMPIHTGLTIKQEPIDLDFETDQIETITDPLDMTHDEQNENDGVWALHITNEQSVQSEKEMEKQTKSEVACRRRTRSFGMPISPPTMPQESERNTTVSKPYCTIEVKDEPLQEDEYDSNIEIESVTGGEILPNPVAAICPTEDRVMEADSTQRSNSVTFKTKKKVKRGPHTHLRNKHQFRKKCVFCQINLHSKYSYGKHMERFHTPLPESEQIDNKANLKLAIKQKAQSTKSQSAAFQDEHRFFTNNLQEENSADELTSCNKDGDEEMIEDVEDEINKMDRNSETPLSQVQQNIIGQLKTYSCYSCKQVFPDRRTTLNHLRQHLPDLRPFTCVACLTQFSDRLIYKNHCYTSFECAMKIAIVEPKSGLEKYFTCNMCSKSVANRQELLNHLTSQHSDDQLANETPSSSNQTPAKMLRKDPTSTPAPLNWSHLHLPGPYVNGNPAFNLPCSLCGMIYKHKRNLLDHQTICSQRPASERTSYACVHCRMTFLLFRKYTSHLYSVHSTSEITCSLCRKKFNTPTDFLVHHKKNHPLEGGQVDGERASVNQENSLKEWNDYEEELHTNESRSSRQKYSCALCGQEFPTRTELGEHRNLHLKVKIYSCVICRSMFSSAGALEVHMKDHGIEDPAEQSAHTSYVEYEGAEDTKDIALLDNSRDSNSESGETCNICNKSFTSSANRKRHIANVHKNSKNRRKCTECRRVFTKKNAFEYHVRTEHKHPSTSSITCPMCPQTFTTRRNLNLHYETTHINQVDALHECDICGKQFKEDSSLKIHRGWHTRKTHRLISDVKGLNKSLPILQSQDIFNDSTVSVPKPARARKSFPNSPPSKPKPQLQCQVCDDKFIDVGDLRKHLWDVHCSRNKNEKNYTTSDLQCELCTHTLPDKPSLERHLEWHVENPILSDSKNGVKRKRYYTPRDLRTYPCEICGNFYTSRRSLLRHQKLHKVSTTAATRFQATVKKPLANQFPCNVCNKIFDTSIKLRKHRLYHLVNSAENKRDSIVEKPELQCNLCSKYHTSKIDLQLHLAKNCPYRSQETSGPRIKRRKIISTVESNAPVHFEQPKPVPVSSKSNFNLSVGWRMKKMWNCSLCLKSFLGRSTLYKHQMSVHGKDAFRQAALLAKKKSVSKPLPSLESSRFPCTVCTKDFPTALSLKLHMSSLHKDSKPKSCNICGKTFSSNVGIRNHMQTHSTSTYSCNLCQRLFRTRQAVYMHVRRQHPDEYLIMEDEKSQLCSEIISKPEIPIPKTNVQTSFRCEYCNKSFDTNKGLRVHVKKSHSMHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00174484;
90% Identity: iTF_00175232;
80% Identity: -