Aros000887.1
Basic Information
- Insect
- Athalia rosae
- Gene Symbol
- lilli
- Assembly
- GCA_000344095.2
- Location
- NW:8805-47684[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-08 0.00076 18.1 0.1 28 120 31 127 22 181 0.66 2 2 1.4e-08 0.00015 20.4 0.4 323 382 193 253 180 271 0.79
Sequence Information
- Coding Sequence
- ATGTCGGTCCAAGCTGAACAAGCAGCTGCTGGGGGTGGTCCAGATCCCCATCATCATCACGGGCATCACCATCACAACTCCAATCCGAATACGGCCACCGCCTCGCTCTTCAGAGCCCCGGTCAGGGTTAATCCGGATGTACAGGACCGAACGGCGCAACAGATACAATCGCAGCTCGGCAATTACTCACTGGTGAAACACCTTCTCGACGAACCGAAGAGGCTGATCGGAATCGAAGGAGTACCGCCGAGTCCCGGTCCCCTCGGTCAGCGCAAACCGTCGGCCCAGGAGTTCAAGAGACCCGGAGGACCCCGTCCAAATTCCAGTGGAAATCACGGGTCGCAAAACAGCGGTTACGTTAAACCGGCGGACGGCAAACCTCCGTACATGGGGAGAGGCGGTTATCCCGGTCAACCCGTTAAACACGGTGGGGGAAGCAACGATCATCGAAGTCATGGTCTTCTTCCCGCAAAAGGTCCTCCCAATCAGAACGTACGCGGTGCTAGTCGTAGCGGAACAACGAACGCCGGAACTGGAAGCAATCCGGTCGCCGGCGGAACTTCCGGAAGATTGCAAAGCGCGGGAAGTCATCTTTCCCGTTTACCGATGGACAACgGAACAATGTCTCGACATTCTGTGACCGAGAACGCGTCCGACGTTGATCATATTCTCAAGgAAATGACGTTGCCCATCACACCGCTGACAGCTATAGCCCAAACGCCACGAAAAGAGCCAGAGTCAAAATTTACCTTCAACCCGTACCTCGACAAGGTGAgcagcaaaaatgaaaaagacaagtttgaaaatttaaaacatGTTTTAATCGGATCGTGA
- Protein Sequence
- MSVQAEQAAAGGGPDPHHHHGHHHHNSNPNTATASLFRAPVRVNPDVQDRTAQQIQSQLGNYSLVKHLLDEPKRLIGIEGVPPSPGPLGQRKPSAQEFKRPGGPRPNSSGNHGSQNSGYVKPADGKPPYMGRGGYPGQPVKHGGGSNDHRSHGLLPAKGPPNQNVRGASRSGTTNAGTGSNPVAGGTSGRLQSAGSHLSRLPMDNGTMSRHSVTENASDVDHILKEMTLPITPLTAIAQTPRKEPESKFTFNPYLDKVSSKNEKDKFENLKHVLIGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00174168;
- 80% Identity
- -