Acir005207.1
Basic Information
- Insect
- Athalia circularis
- Gene Symbol
- lilli
- Assembly
- GCA_963978495.1
- Location
- OZ021697.1:30976519-30989145[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-06 0.049 13.3 0.0 44 121 29 108 24 164 0.69 2 2 1.7e-08 0.00043 20.1 0.0 324 381 175 233 165 241 0.82
Sequence Information
- Coding Sequence
- ATGCCTCACCTCACCTACAACCCCCGTAATTTAGGGTTCAGAACGCCTATTATTCTCCGGAGCAAGGTTAATCCGGATGTCCAGGATCGAACAGCGCAACAGATACAATCACAGCTCGGAAATTATTCCCTGGTAAAACATCTTCTCGATGAACCAAAGAGGCTGATTGGAATCGAAGGAGTACCGCCGAGTCCTGGTCCACTTGGTCCGCGTAAACCGTCGGCTCAGGAGTTCAAAAGACCCGGAGGACCTCGTCCAAATTCAAGTGGAAATCACGGATCGCAAAATAGTGGTTACGTTAAACCTGCGGACGGTAAACCTCCATATATGGGAAGAGGTGGTTATCCTGGACAACCCGTTAAACACGGTGGGGGAAGTAATGATCATCGAAGTCATGGTTTTCTTCCAGCAAAAGGTCCTCCCAATCAAAACGTCAGAGGTGCGAATCGAAGTGGAACTGGAAGTGGAACTGTATCTGGAAATAATCCAGGTGGTGGTGGAACTTCTGCAAGATTGCAAAGCGCAGGAAGTCATCTTTCCCGATTACCTATGGACAACgGAACAATGTCTCGACATTCTGTGACCGAGAACGCATCCGACGTCGATCACATTCTCAAGGAAATGACGTTGCCCATCACACCGCTGACAGCTATAGCCCAAACGCCGCGAAAGGAGCCAGAGTCAAAATTTACCTTCAATCCGTACCTCGATAAGctGACCGAAGTACCTCCGCCAGAACCCAGCAAAACCCGTGAGTACACTACTTTCTTTTCatgttga
- Protein Sequence
- MPHLTYNPRNLGFRTPIILRSKVNPDVQDRTAQQIQSQLGNYSLVKHLLDEPKRLIGIEGVPPSPGPLGPRKPSAQEFKRPGGPRPNSSGNHGSQNSGYVKPADGKPPYMGRGGYPGQPVKHGGGSNDHRSHGFLPAKGPPNQNVRGANRSGTGSGTVSGNNPGGGGTSARLQSAGSHLSRLPMDNGTMSRHSVTENASDVDHILKEMTLPITPLTAIAQTPRKEPESKFTFNPYLDKLTEVPPPEPSKTREYTTFFSC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00175019;
- 90% Identity
- iTF_00175019; iTF_00175741;
- 80% Identity
- -