Basic Information

Insect: Atethmia centrago
Gene Symbol: -
Assembly: GCA_905333075.2
Location: HG995375.1:20614761-20623291[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 4 6.2e+02 3.0 0.9 1 23 54 77 54 77 0.94

2 20 0.11 17 7.9 4.1 1 23 84 107 84 107 0.97

3 20 6.4 9.8e+02 2.3 4.0 1 23 192 214 192 214 0.96

4 20 0.0022 0.34 13.2 1.0 2 23 220 241 219 241 0.97

5 20 2.6 4.1e+02 3.5 1.4 1 23 247 269 247 270 0.94

6 20 0.26 40 6.7 3.4 2 22 503 523 502 523 0.95

7 20 0.11 17 7.9 2.6 1 23 620 642 620 642 0.95

8 20 4 6.1e+02 3.0 0.3 2 23 776 797 775 797 0.95

9 20 0.0014 0.22 13.8 0.5 2 23 877 898 876 898 0.96

10 20 0.17 26 7.3 0.3 1 23 906 928 906 928 0.97

11 20 6.3 9.8e+02 2.3 2.6 1 23 964 986 964 986 0.93

12 20 0.0003 0.047 15.9 4.0 1 23 994 1016 994 1016 0.99

13 20 0.13 21 7.6 1.8 1 23 1095 1117 1095 1117 0.99

14 20 7.8 1.2e+03 2.1 0.2 2 19 1202 1219 1201 1223 0.92

15 20 0.0099 1.5 11.2 1.0 1 23 1288 1310 1288 1310 0.95

16 20 0.012 1.8 10.9 0.5 1 23 1316 1338 1316 1338 0.96

17 20 0.0085 1.3 11.4 2.6 1 23 1419 1441 1419 1441 0.97

18 20 0.00021 0.033 16.4 1.4 1 23 1447 1469 1447 1469 0.99

19 20 0.42 65 6.1 2.9 1 23 1561 1583 1561 1583 0.96

20 20 0.012 1.9 10.9 5.6 1 23 1594 1616 1594 1616 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	4	6.2e+02	3.0	0.9	1	23	54	77	54	77	0.94
2	20	0.11	17	7.9	4.1	1	23	84	107	84	107	0.97
3	20	6.4	9.8e+02	2.3	4.0	1	23	192	214	192	214	0.96
4	20	0.0022	0.34	13.2	1.0	2	23	220	241	219	241	0.97
5	20	2.6	4.1e+02	3.5	1.4	1	23	247	269	247	270	0.94
6	20	0.26	40	6.7	3.4	2	22	503	523	502	523	0.95
7	20	0.11	17	7.9	2.6	1	23	620	642	620	642	0.95
8	20	4	6.1e+02	3.0	0.3	2	23	776	797	775	797	0.95
9	20	0.0014	0.22	13.8	0.5	2	23	877	898	876	898	0.96
10	20	0.17	26	7.3	0.3	1	23	906	928	906	928	0.97
11	20	6.3	9.8e+02	2.3	2.6	1	23	964	986	964	986	0.93
12	20	0.0003	0.047	15.9	4.0	1	23	994	1016	994	1016	0.99
13	20	0.13	21	7.6	1.8	1	23	1095	1117	1095	1117	0.99
14	20	7.8	1.2e+03	2.1	0.2	2	19	1202	1219	1201	1223	0.92
15	20	0.0099	1.5	11.2	1.0	1	23	1288	1310	1288	1310	0.95
16	20	0.012	1.8	10.9	0.5	1	23	1316	1338	1316	1338	0.96
17	20	0.0085	1.3	11.4	2.6	1	23	1419	1441	1419	1441	0.97
18	20	0.00021	0.033	16.4	1.4	1	23	1447	1469	1447	1469	0.99
19	20	0.42	65	6.1	2.9	1	23	1561	1583	1561	1583	0.96
20	20	0.012	1.9	10.9	5.6	1	23	1594	1616	1594	1616	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCACAAGTCGGCGAGGTTGCGACTATCGTGCGCCACCTTGAAGGCCGCGTCTGCGGCGACGTGTCTTCGGAGGCTTCCTCGGATGCCGCCGAAGATTTTGAATTACCACAGTGCAAGATAAGGAGGAATTATAATTGCACCAAGTGCACGTTCTATACGCAGAACCCGCGCGCTTATCTCGTCCACACACGTGACGCTCACTTCGTTAGACTCAAGATTTACGATTGTCCACACTGTGTTTACGCCTCGAGACATCATCAAAAACTTATAAGACACGTTAAAATGGTTCACGGAGGATCAAAGCCGACTTCTGCGGCTGCTAAAGTGGACGCAGAGCTATCACCATCCAACGATAACATGGAGCCAGCAGAGCGCATTGAAGACATGTTTGAGGAAGTCGAGGACTGCGAGGATATGATGATGGAAGTAGATGATGACTCCATGGACCAACCTGATGATATCGACGGCGACTGCGATAGAAGTCTTGACTACGCATCACCCTCTTATCGGAGGGCACATCTGTCAAAAGCTAAGGGCAAATTCTTCTCATGCGATAAGTGCAACTATGTCACCCACATAAGAGCTAGATTCACAAAGCACGTCAAGTATCATTCGATGCCTATGATCAAGTGTACAATGTGTGATTTTCGAACTCCATACAAGTGGAATTTGGACCGTCACATGAAGAACCACGGTGGAAGTGGGAGTTTCAATTGTTCGATGTGCAACTTCACGGCGGACATCAAGCAGAGTCTGACGGTGCACGAGATGAATCATCACACACCGCCAGCGGGCCAATCGCTGTCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACACGGTTATCGCTGAGTTCGACGCAGCGAGCACTTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGGTCTCGgACATGGGTCTTCAGTACGCAGAGAGAGAACTAGTCAGTTGCAAAAGTGATTCCAATGACGGTACAGCGTCTGATGCAATCACCAGAAAAGAGTCTTCGCAAGATGGATACAACCAGCTTTCACCAACCAACAGTGCAGACGAGaagctacaaaaaaaaagtagaaagATTACCCGACCAATACCTCCACTCATACCGTTAAACTCTTCAACACCcaaccaaaaacaaacatgCTCCGGAGAACCGCCACAGAAAAAGTTCAAGGAATCCTTACCCGTCGACATCGATGACATATCTgctgaaaatacttttttacCAGCAAATCCATCAATAAAAGAGACTGCAGGCCGAAAGAAAAATGAATCATTTTTCGACAGATTAAAAGAAAGACTGCTTACAGAAACAGGCGAAGAAGGTTCATTAATATGCAAGATCTGTGGATTTGAAAGTAAATGCTTGTCAGAACATTCTGTCCACGAGAAAAATTGTTCTCCACAAACGAACCGGATCAATGCAAACACTTCGCTTAAAAGTTTAAGTTCCACTCGATGCCAGAATTGCAGACACCGATGTAAATCTAGCGCCGACTTATACATCCACATGCAAACTTGCGGAAAGAGCGAAAAAATCGACGATAAAAACTCTATCAAAAATGAAAATAGTAATGATGAAGTCATTCCAATCCATGAAAAAGAGACTGAACCGCATCCAATGGAAAACGTCGTTTTCGTATGGAACAACATTAATCATGACCCTAACAAGTTTGACATACCTTTAGACATAAACATAAATGATGATTCCACTCTACCAGAAATACATCGAAGTTTTGACGCTGAGATTGTTGATGAAAATGAAAGCATGAATTTGTCGCCGAGTCAAGCTATTGGAAGGAAGGTATTTAAATGTCCACATTGTCCATTTTTCTCCACAACAGCGTCCAGATTTCACGTTCATATCGTGGGTCATTTAAACAAGAAACCATTTGAGTGTTCTCTCTGCAAATATAAATCTAACTGGAGATGGGATATAACCAAACACATTAAATTGAAATCTGCGAGGGATCCAGAGCATAACGAAGCAAAAGTACTTATGACCGATGAAACAGGAAGAAGAAACTATAGCAAATACAACAAGTTCCTAGCAATgcccattttaaatgaaaatggtGAAAATGAGTTTCACTACCTGGATCCTATCACTGCAGTCGATAGCACGATGGAAATGGATGAATCATTTAATGATATGTCAGACGTTCAATTTGAAATGCAACCGCTTAACTTACAGACTCAACACAGTGAAGATAATTACAACTATATTGATAACAGAGGTCTCAATGACATGAAGAAACCCAAGAGAACATTATGGAAATGTAAAAGATGTAACTACAAaGATCCCTCAAGAGAGGCTCTTTTAGAGCATGTCCGTGAACACTCTAGATCGGATGGCATCCATGACGAACTAAACAAACCGCCTATTAAGAAACCTGAAAATAATACTCCCGACCCAGCAGACCTGGCGTATCGTTGTGGCCATTGTAACCAATTGTCTAATTGGAAACATGTCATACAGCGCCATTGCCGATTAAAACACGATGGAGTGATCAAAGTGATAACTACAGTTAAACCAAAACCTGACCCACCAATGAACATCAATGAGATCAACATTGACACTTGCAACAAATGTCCGTACAGAACGAGTGACAAGAAACTACTCATTGCTCATTTACAACAGCATCAGCCCTCGCCGAATTCTATTTTCAAGTGCTACTTCTGCCCGTTCTTCGTAAAGGATGAGCCAGAATTAATCCAACATCTACTCCTGCACGGTATCACTGACCCAGAGGATTACATCGCAAAAGCAATGGGAACCAAATCCCCAGGACCAGAACCGCAAGCACCTATTACTACGACGTTAAACTCCACCAAGCGTCACAAATGCATAGAATGTCCATACGAAACAAATAGTAAGTCACAATTTATGTACCACGAACAATTTCATCGACTTCCGGCTGATACGCCTTATAAATGTCCAGAATGCAACTACAGCGTATCTAAGAGACACCTGCTGCACCAGCATCTGCGAGTACACGGAATTAAAAGAGTTGAAACTGAGGCCGAATTAGAAGCAGCACCAAACAAGCTAGTTAAAATGGACTTCCATATTAATCTTGATGAAATACCATATGTCTGGGTTTCGGCCAAGAATGAGTTTCATAAAATGTACAAGTGCCGATATTGTTCATACGTTAATGCTGTAAAAAGCAAAATACCAAATCATGAAAAAATTCATTCCATCGTATTCGAAAACAATGATACAACTATCTACAAGTGTTTGGAATGCAAATTCACATGTGATAACGCCGCCAGGCTAGCCGAGCATTCCAAAACTCACGGCGAAATATATGGTCGCATTTATTGTCCCGTTGAATATGATGTGCCCGATGATGAACAAATCACTAAATTGAGAAAGGTTATAGAAATTGAAAAGTCAGCAAATCCAGAAAGTTTCTCTAGAGATGAAGGCAATACGCACGAATtaagagaaataaaattattatatttttgtcaaAAGTGCCCAGCAAGATTTCTTGAAGACGGTGAACTAGACGTTCATGAAAAATGTCATGATGTAACATTGTCCAATAAATGTAAAAGTTGTGACTTTTCAGTCACCGAAGAAAATGACTTAGCGGCACATGATACCGTGCACACAGATGAATATCACACAAAAACGAAGATGCTTAAATTTGTTCACCACTCACATCCTTTGCACATACAACCCGTACTAGACTTTGTTCTCTGTCCAAATACTTCAGAGGTTACGTGGCGAGCCACTGGGCCAAGTAAAGCTGAACATATCGAAAGTCCTATGAAAAAAGACACAAAACATGTGCCAAAACAATATTATTGCAAACAATGTCCAGCTAAGTTCTTCAAAAGTTCCGCTCTTACCTATCACTTGGGACTACATGGAGGTGAGGGCGAGTTTAAGTGTAAGAAGTGTAATTACGCCGTGAAGAACGTTGGAAATCTAGGCAAACATGAATTACTCCACGAAAATGAGAACAAGGCTACAAtggattataaaaatattcctTTGTCGGGCACCGATTTGTTCCAGAGAAAGACTGAGGCTCAGAAAAGAGTATTTACTGATAAAGATAAGTTAGTTAAGCCGAACGATCATTTTCCGCCTGTCCTACAAGCCGATCCCCAATTTGGTTATTTAATGCATGGTAATCCTGAATTTATATATCCCACGTACCTGAAAAATGGACGTCAGAAAGAAAAACGATACAAATGCCACAAGTGCCCCTCAGCTTTTGAGAAAAGAGAACAATATAAAATTCATTTGTCATTGCATGGCTCCAAGCAAAGATATAAGTGTGAGTTATGTGATTATTCAGTAAAATATTACGCTAATTACGTTCAGCATATGCGAAAACATCAAATGAACGATGAAGCGCAAGCTGAAAGGAAGAAAgataataatgattttacaGAATCTGAACATCAAGAAGACGCTAAGCAAGAGGACAGCAGTGATAATATTAAACTTGCAATAAAAACTATGCCAAAAGGAGCTGCTAAGAGCGACTTCCAACAATTCTCAATTAGCGACCAGCAAACTCTCAGACTGCTGCAGAGAAGACGGTCAATGAATATTTCTGGAAAGGATCACAGCACTTCTGAAACTTCGCCGATGAAAGAGCGCAAAATGCACATGTGTCTATTATGTCCTTACACTAACCAACGTCAAGATTCATTAACCAATCATTACAGAAGGCACGGTGACACCGATGTTCTCAACGGAGGAAGTCATAAATGTTCCCATTGCGACCTAGTGGTTGTTCAGTCGCATTTCCTTCGGGAACATCTGAAGACACACTTCAACTACCACAAAACTCTTATTCCCGAATGTTTTGTGGCTAACGAAGCTGTTAGTTTTACCGTAACCAATTTGGATGAAGACAGTGAATCAGTTGATCTCAAATTAGACATGCAGAACAAGAGTTTTGCATGTAATGATGAAAAGATATTTGTGAAAATTAAAACTGGAGAGTTATTGGTGGAATAA
Protein Sequence: MLQQMSSPPSAQVGEVATIVRHLEGRVCGDVSSEASSDAAEDFELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDAHFVRLKIYDCPHCVYASRHHQKLIRHVKMVHGGSKPTSAAAKVDAELSPSNDNMEPAERIEDMFEEVEDCEDMMMEVDDDSMDQPDDIDGDCDRSLDYASPSYRRAHLSKAKGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFNCSMCNFTADIKQSLTVHEMNHHTPPAGQSLSSRRRNRVGASDTVIAEFDAASTLLPKEEEGSGDSRSSHSVSDMGLQYAERELVSCKSDSNDGTASDAITRKESSQDGYNQLSPTNSADEKLQKKSRKITRPIPPLIPLNSSTPNQKQTCSGEPPQKKFKESLPVDIDDISAENTFLPANPSIKETAGRKKNESFFDRLKERLLTETGEEGSLICKICGFESKCLSEHSVHEKNCSPQTNRINANTSLKSLSSTRCQNCRHRCKSSADLYIHMQTCGKSEKIDDKNSIKNENSNDEVIPIHEKETEPHPMENVVFVWNNINHDPNKFDIPLDININDDSTLPEIHRSFDAEIVDENESMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMPILNENGENEFHYLDPITAVDSTMEMDESFNDMSDVQFEMQPLNLQTQHSEDNYNYIDNRGLNDMKKPKRTLWKCKRCNYKDPSREALLEHVREHSRSDGIHDELNKPPIKKPENNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPPMNINEINIDTCNKCPYRTSDKKLLIAHLQQHQPSPNSIFKCYFCPFFVKDEPELIQHLLLHGITDPEDYIAKAMGTKSPGPEPQAPITTTLNSTKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIKRVETEAELEAAPNKLVKMDFHINLDEIPYVWVSAKNEFHKMYKCRYCSYVNAVKSKIPNHEKIHSIVFENNDTTIYKCLECKFTCDNAARLAEHSKTHGEIYGRIYCPVEYDVPDDEQITKLRKVIEIEKSANPESFSRDEGNTHELREIKLLYFCQKCPARFLEDGELDVHEKCHDVTLSNKCKSCDFSVTEENDLAAHDTVHTDEYHTKTKMLKFVHHSHPLHIQPVLDFVLCPNTSEVTWRATGPSKAEHIESPMKKDTKHVPKQYYCKQCPAKFFKSSALTYHLGLHGGEGEFKCKKCNYAVKNVGNLGKHELLHENENKATMDYKNIPLSGTDLFQRKTEAQKRVFTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKDNNDFTESEHQEDAKQEDSSDNIKLAIKTMPKGAAKSDFQQFSISDQQTLRLLQRRRSMNISGKDHSTSETSPMKERKMHMCLLCPYTNQRQDSLTNHYRRHGDTDVLNGGSHKCSHCDLVVVQSHFLREHLKTHFNYHKTLIPECFVANEAVSFTVTNLDEDSESVDLKLDMQNKSFACNDEKIFVKIKTGELLVE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01231174;
90% Identity: iTF_00726922;
80% Identity: -