Basic Information

Insect: Atethmia centrago
Gene Symbol: -
Assembly: GCA_905333075.2
Location: HG995395.1:12747440-12819293[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.4 3.7e+02 3.7 0.9 2 23 490 511 489 511 0.90

2 17 0.0026 0.4 13.0 0.0 1 23 521 544 521 544 0.95

3 17 0.022 3.4 10.1 0.4 2 21 669 688 669 689 0.94

4 17 0.05 7.7 9.0 3.8 2 23 750 771 749 771 0.95

5 17 1.1 1.7e+02 4.8 0.7 1 23 783 807 783 807 0.91

6 17 0.00018 0.028 16.6 0.3 2 23 814 837 813 837 0.97

7 17 0.2 31 7.1 0.3 1 23 843 865 843 865 0.93

8 17 0.0047 0.73 12.2 2.9 1 23 871 893 871 893 0.98

9 17 0.5 77 5.8 0.6 2 20 904 922 904 924 0.90

10 17 0.21 33 7.0 0.2 1 23 1003 1025 1003 1025 0.97

11 17 2.9 4.4e+02 3.4 7.2 1 23 1032 1054 1032 1054 0.95

12 17 0.0019 0.3 13.4 1.8 1 23 1104 1127 1104 1127 0.95

13 17 0.00069 0.11 14.8 0.5 1 23 1134 1157 1134 1157 0.98

14 17 0.0053 0.83 12.0 0.2 2 23 1179 1201 1178 1201 0.96

15 17 0.00042 0.066 15.5 1.2 1 23 1248 1270 1248 1270 0.96

16 17 0.00017 0.026 16.7 0.1 1 23 1276 1298 1276 1298 0.97

17 17 0.00054 0.083 15.2 0.7 3 23 1306 1327 1304 1327 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.4	3.7e+02	3.7	0.9	2	23	490	511	489	511	0.90
2	17	0.0026	0.4	13.0	0.0	1	23	521	544	521	544	0.95
3	17	0.022	3.4	10.1	0.4	2	21	669	688	669	689	0.94
4	17	0.05	7.7	9.0	3.8	2	23	750	771	749	771	0.95
5	17	1.1	1.7e+02	4.8	0.7	1	23	783	807	783	807	0.91
6	17	0.00018	0.028	16.6	0.3	2	23	814	837	813	837	0.97
7	17	0.2	31	7.1	0.3	1	23	843	865	843	865	0.93
8	17	0.0047	0.73	12.2	2.9	1	23	871	893	871	893	0.98
9	17	0.5	77	5.8	0.6	2	20	904	922	904	924	0.90
10	17	0.21	33	7.0	0.2	1	23	1003	1025	1003	1025	0.97
11	17	2.9	4.4e+02	3.4	7.2	1	23	1032	1054	1032	1054	0.95
12	17	0.0019	0.3	13.4	1.8	1	23	1104	1127	1104	1127	0.95
13	17	0.00069	0.11	14.8	0.5	1	23	1134	1157	1134	1157	0.98
14	17	0.0053	0.83	12.0	0.2	2	23	1179	1201	1178	1201	0.96
15	17	0.00042	0.066	15.5	1.2	1	23	1248	1270	1248	1270	0.96
16	17	0.00017	0.026	16.7	0.1	1	23	1276	1298	1276	1298	0.97
17	17	0.00054	0.083	15.2	0.7	3	23	1306	1327	1304	1327	0.95

Sequence Information

Coding Sequence: ATGATGGAGCCGCAACCACCTCTGATCCTCTGCATGGAGAATGCGTCGGGTGAGGAAGTGGCGCTCAGGATAGAACCCGATGATAACTTCCAGATGTTTCTAGATAAAGCCAGGTTACTCCTAGGCTTTGACGTGGACATAAACTCGATAACCAGAAACCAGCCCGTTTCTCTATCAGAGAATGTTTATCAATTCTTAGTAAACGCGGAACAAAACTTACAAGCGGACGAACTAACACAAAACTTTGACCAAATGTTGGACACCAACGATGGAGCCAACGACTTGGTGTACATATTGGACGATGGCACACAAATCCGTGCTTCACAAATACACTTTGATAATGATGATCCTTTAGTAGATTTGACAGCTGagaaaataccttttgttaaatACGCTGACGACGTCACTGatgtagatgatgatgaaatacatATTCAGGAAactaaaaagattaatattgtTGAAAGTCCTGTGTCGAGATGGTCGAGTAAAAACTCGAGTCCAAAATGCAGTTTCGTTAACTCTCTTCCGTTCAAATTAGTATGTAATAATACATCAGGTTTCGAAGCTCAATTCACTAAATATTTAGAAGCAAATACAACTAAAACTTACGCTACCTTAAACCCAGTAACAACTCGAAATAAATCTCCAAAAAGCTTGATCAAAGATAATTTTAAGAACTACGATGATAGTTATCATAGGAACGACAACTTGTCTTATACTCGGGAAGAGATTCTGAACATGTTCAAAGACTCCCCGATGACCTCACTGCCGTATGACCAGGGTTACAGTGAGAGGAGACATGTTCGAAAGACGGACCCTTCAAGGCTTGTTCATAAGAATTGGAGTAAGCCTCTTTCTTACGTCGATATTGACGGAGTATTGATAGGGGAAAGCGAGAGccaaatatgttttatttgcGGCAAACATGTGGACAGCAACGTTGATAAATTGTACCTTTTTGACAACGAAGATCAAAGATTGTATAGGTGCTCACCACAGAAAAAAATGTCGACACAATTGAAAATTATCTGCGAGTGTTGTCTTAACGAAAATTTTACACCGTGTCGAATGAAAAGCGCAAATCAATTCTTAAATCCCGACGAATTTCTCGTCATAAGAAATAATCAGCAATATATCTTccaaaaggttaaaaacttcAATTTCGCACATCTAGGCAAAGCTAAAGAGATCATAAACAAGATAGAGAAGAAAATAGACAAAGAAGAGTTTGTTAAAGTCGAGATTGGTTCTGATGGTGAAATCATTACCAAGCCCATAGACACACGGTGTGATGACGTCATCATTGTTAAAGATGAGAAGAAGGAGGGTAGTTCGAGTGACGTAGAGATTGTAGAGCCGGAACCAGAGATAGATAATATCATAGACAATTTGGAGGAAGCTGACGAGGAGGTGAAAGAGTTTTTGGGGAAATATCAACGTGATGATAGTGAAGTTACTGAATTAAAATGCAGATTCTGTGAACAAATCTTCTCGGATCTGGCGGCAGTTACAGATCACTGTGAAACACACAAACATGACTTAGAAGATGGCGAAGTTTTTCCGTGTCCACTCTGCAATTATGGTTATGCAAATTTAAAATGGCTAAAAGCCCATGTGAAGGCAGCCCACGAAAAGACTGAAACccctaaaatattaaaagaagaaaatGAACCTATGAAACAGGAGAATGCAGATGACGGAGAAACTCCTGCTAAAGTATCACCGCCCATTGCGACTCGCACAAGGAGTTCTAGTAAAAAGGGAGATGGCGATAGAAAagAGAATGAAAAATCGGACGATGTTAAGGCTGAATCTAATACTCAGGCGACGGAGCCACCCATCATAAAAACGGAGGTAAAGCAAGAATCCCTGGACAGTAGTGAGGATGAGATCTGGATCGTTCAGACTGCTGATGCTGAAGCCACACAGGAGCTGCAGAAACTACTCTGCAGTGCCAAGgTTAAAGAAGATGGACAAGATGGTGAATCTGAAAAGACACCCAAATGTGTTAATTGCGGGCAAATATTCGCCAACGCAGATGGCCTGTCAAACCATCGCTGCAGAAGACGCAACCGTAAGCGGAAGTCCAAGGACAAccttatatgtatacctactgaGGAAGATTTTTTGAAGaGAGCTCAAGGACGCCCTCGACCAGCAGATACATCAATAGACAATGATCTTCTTACTATGcgtCCCCGAAAACGCCGCAACCGGGAACCCACGTCCAACCCTCAAGTGGTGACCTGCCACAACTGTAATGAGTCCTTCACGTCCAAAGTTAGACTCAAGTTTCATATGCAATTCCACGAAACGTCAAACCAAACCCGGTCAGACGGGCGCTACTCCTGCTCCGAGTGTGACGACGCCACCTTCGCCACGGAGACGGAGCTCTTCGACCACGTCCACTTCCAACATGACAAGCAGAAGAGGTGGCAATGTCCCGTCGAGGGTTGTGGGAAGACTTTCTTCCTCAGGGCAACCTTAACAAAACACAGTCGCACGCATACGGACACACGGCGCTACGTGTGTGTTACATGTGACAAGAGATTCTTAGATAAACAGACGTTAGATGAGCATGGAGTTACACATTTACAGATAAAACCCTTCCAATGCCACATATGCCTGAAGCAGTTAACCCGTCGCTCGCGCTTGCGTATGCATGTGCGTGCGCACGAAGAGGAGTTGGCGCCGAGGCTTGTGCGCGTCTGTGCGGTCTGCAAGAGGGCTTTTAGAGATCATCGGCATGCACAGGAGCACGCATCAAAATCGACGGAATGTATCGAAGCTTTCGCAAACGAGTTAAAAGAAGAGGCTGAAGAAGTATCTATGCAGTTGTCGCCTACCAGTGGTTTAGTCAGACATACTGTGCAGGTTGTTGAATCTCCAAAGCTATCAAAGCCGATAAAACGACAGGTGACGAACGAAGTGGGCGAGCCACTTCTATCTCAGTTAGCTGATGAAGCGCGCGCTTTGATAAGGGTGGTCGAGATTGAGAAGGCGTTCCGCTGCGAGTATTGTGAAGAtgTGTTCTATTTGGAGACCGGTCTGAACACGCACCGCGCTATACACAAAGGAGTCAAGAATCCCTTCACTTGCCACATATGTAAAGTTAGCTTCGCTACTTATTCCAGATGCACAACCCACAAAACAACCCACGGCTTCTACAAGCGCTCACTAGCCGATGCTAAAAAACAAGCCGATGCTAAGAAACAAGCCGATGGCCCCGCACAAGCCGACGCCGACTCCTCCGCACGCTCTGCCACTGGCATACTGGGATACGGTGACTTTCCAGTCGTCAAACACTTCCTATGCGAGGACTGCGGCCGCTCATACCTGCACTGGACATACCTTCAAGTACACAGGCGCATGAAACACGCCAACGAGAACTTTCTGTACAAATGTAACCAGTGCGAACTTACCTTTCCGAACAGCTGGGGCCTGGCGTACCATCGTAAGAAGGTGCACGGCAAGACTGGAGCTGACGACCCTGGGACCACTAGCAAGAGCAGCAGGGACGATTATAGGATACCGTGTCGGGATTGTGATGAGGTGTTGCCGAACAAAACAGCTTTATACAAGCATCGTAAGAAAGAACACAGCGATGGAACTACTCGGGGTTATACTAAACCGgAACTTATCATTTTCAATCTTAGAGACGTCCACGGCAAAGAAGACGAGTCCTGCCTATCCTGCAACAAGACATCGACCACAGAAGGGACATGTCCCCGCCGTCCACACGCGTGTCCCGTCTGTGGACACGCCTTCCGGACACTTTCTATGCGAAATGAACATCTGAGGGTACACACAGGGGAGAGACCCTTTCCTTGTGATGTGTGTGGAGTTGCGTTCAGGAGGTCCACAGCTATGCGGAACCACCGCCTCATCCACACGGGCGTGCGCGCGTGGGCGTGCGGGCGCTGCCCCAAGCGCTTCCGTATCCGCTCCGACCTGCGCACGCACCTGCGGCTCAAACATCCTGCTACTATTGTAGTTGTAGAGATGGAAGGCCTAAACCCGTCGTCTGATGAAGTACTGAAGGCGCTCGCTGCACAAAACGTTCCACACGACAAACTTATAGATATCACTAAGATCTCATTCACGAAGGGCTCAACGAGTGTGATCCCGACGTGCACGCGCGCACTGTCCGCCCTCAACAACGTGCCGCGCACGCACGTCGCGTGCATCAAGCCCGCACCCGCACTGGAAGAATTTCAACCTGCTCGACGCGGTCGTGGCATCGCTAAAAACCCGCGGAGACCCAAAATACTACAGCGAGGGGAAGCGGAGCCACACGACAACTCTGCCTACCCCATCGTTGGTGGCGAAgaGCTATCAGATCTGAACGTGCAGCTCCTGCTACGGGATGGCGTGCTAGTGAACAGCAACCAAATGGTTCAGCTACAGTTAGATGACCCTATACTGATGGAGTGA
Protein Sequence: MMEPQPPLILCMENASGEEVALRIEPDDNFQMFLDKARLLLGFDVDINSITRNQPVSLSENVYQFLVNAEQNLQADELTQNFDQMLDTNDGANDLVYILDDGTQIRASQIHFDNDDPLVDLTAEKIPFVKYADDVTDVDDDEIHIQETKKINIVESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTTKTYATLNPVTTRNKSPKSLIKDNFKNYDDSYHRNDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKNWSKPLSYVDIDGVLIGESESQICFICGKHVDSNVDKLYLFDNEDQRLYRCSPQKKMSTQLKIICECCLNENFTPCRMKSANQFLNPDEFLVIRNNQQYIFQKVKNFNFAHLGKAKEIINKIEKKIDKEEFVKVEIGSDGEIITKPIDTRCDDVIIVKDEKKEGSSSDVEIVEPEPEIDNIIDNLEEADEEVKEFLGKYQRDDSEVTELKCRFCEQIFSDLAAVTDHCETHKHDLEDGEVFPCPLCNYGYANLKWLKAHVKAAHEKTETPKILKEENEPMKQENADDGETPAKVSPPIATRTRSSSKKGDGDRKENEKSDDVKAESNTQATEPPIIKTEVKQESLDSSEDEIWIVQTADAEATQELQKLLCSAKVKEDGQDGESEKTPKCVNCGQIFANADGLSNHRCRRRNRKRKSKDNLICIPTEEDFLKRAQGRPRPADTSIDNDLLTMRPRKRRNREPTSNPQVVTCHNCNESFTSKVRLKFHMQFHETSNQTRSDGRYSCSECDDATFATETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCDKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCKRAFRDHRHAQEHASKSTECIEAFANELKEEAEEVSMQLSPTSGLVRHTVQVVESPKLSKPIKRQVTNEVGEPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLETGLNTHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADAKKQADGPAQADADSSARSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWGLAYHRKKVHGKTGADDPGTTSKSSRDDYRIPCRDCDEVLPNKTALYKHRKKEHSDGTTRGYTKPELIIFNLRDVHGKEDESCLSCNKTSTTEGTCPRRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPSSDEVLKALAAQNVPHDKLIDITKISFTKGSTSVIPTCTRALSALNNVPRTHVACIKPAPALEEFQPARRGRGIAKNPRRPKILQRGEAEPHDNSAYPIVGGEELSDLNVQLLLRDGVLVNSNQMVQLQLDDPILME*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: iTF_01247427;
80% Identity: -