Acen055896.1
Basic Information
- Insect
- Atethmia centrago
- Gene Symbol
- egg
- Assembly
- GCA_905333075.2
- Location
- HG995394.1:11082553-11124911[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 2e+04 -2.9 0.1 29 38 818 827 787 828 0.66 2 2 3.8e-13 4.9e-09 37.5 0.0 4 73 859 921 856 925 0.88
Sequence Information
- Coding Sequence
- ATGGACATAGAGACAGTGAAACTGTCAGATACGTCTGACAACGAGGTTGATGTTGAACCTACTGAGGTTCAACCGACTGTGGCTGAGTCAAGTAAAGAGAGCGAAGAACAAAAACACTCACCATCTAAATCGCCGAACAACAGCAATATATCGCCCAAGCAATCACCGAGCAAGATGAAGAATTTGGCTATCACCACGCAAGAAGCTAGCTCGGTTGTCAATATTGTGGATTTGGAGGAGAGCAGCTCGTCTGAAGACGAAATACAAGAAGTACAAAAGCAACCGGAACCAGAGACAACAGAGGAAGACAAATCTCCTTCCCTGGAATCAGATGTTACCAACGTTAAAATACCAACGGGCATAGACATAATGTGTACTTCCGGCGGAAATACGTCAGAGATAACGACTAAAGACAACCTCTCCCAGGTTGttatcagtggcgtgcctaagCCGCCGCCGCATAAGCctgccAGATTGAATACCAGTGAAGTTACAATCAAAACTGTTAGTAACACCGAACCATTGATTATACCTGAAACTAAGATTAATGAACAGCCTCAAACACAGTCTAAACCTAAACTGAGTCTAGAAATATTCAGCCTGGATTCTGACGACGATGAAAGTGCAGCAAAAGaaAAATCAACTCCAACTTCCCCCGACAAAATGACAGCCTTGGAAATAGAAAAAGCTAAAGAAACATCCAAATGTATCAATTATTGTTGCACAAGCGACAGCAAAGTGCCTTACAAGCAAGCGGAGGCTTCAGTGATCGCGTACTACGACGCGGGCAGGAAGAGACGCTCCGTGGTGTGCCAGCCATGCGCCGATGTGGTAGCTGCCAGGACTAAGAATCTAATCCAAGGCATCAAGGATCTAACTCCATTGTTAGACCTAGATATGGGCAAGTTATCACAAGACCTGGTGGAGATATCTGATTCGGAGTCTGAAGACGAGGATATGGCTCCGGAAGAACCAAAAGAGAGTATCGGAGAGAAGGGGGCTAAATTCGTAGAAGACAATCTAGTCAAGTTTTTGAACGACACATGGAAGAAATACGACATGGACGTGCGGCTCAAAGAGACACAGATCATGTTAGATGATGAGATTGAAAAACTTGAGCtgGACAGCAAAGAAATAGACGCAATGCTAAACGAGTGTCAGGTAGCAACAGACAAGCTTCGCTGTGATTTATATGCGACGTTCGAGTGTCGACGACAACAGCAACCCTCCTTGGTTATATATGACACGCCTGAATCCAAATATATCGGAGTAGAGGAGCAAGCAACTCCACCAGCCGCTGCCGAATCAACTGaaACTCGTCAAGCCAAGCGTCGTTTGTCGTCAACCAGTGAGACTCCAGCCAAACGTCCAGCTATTCCTCTTGGATATGCTCCTTTAGATGGCGGCGACTCTAAGGAGAAAGCAGCTATTCCAGGACCAGATACTAAATTAGATGACGACAAAGACATATCAGTAGTGAAACTCTCAGCGGAAGCCGCCCCGGCCGACCTGCCTCCCCCCGGCGAGATCTCCCGCCCCCCGCTGCGCGTGGGCATGCCGGTCTACGCCATGAAGAACGCCTTCGGACCCTGGCTTAAAGGCAGGGTGGTGGAGATACAGCCCAAGAATACGAGTGGGgGCAACCCATTCTCTTTGTGTCTTGTGAAATTCGACCATAAAGTCAAGACTAACGGGAAAGTATTGCATGCAAGGTGCATCGCGTATTCTGAGCCCGCTGATGTTAGAATGACTATCGgtACTCGTCTAATAGCCCTGTTCAAGGATTCGAACAAGCGTGAATCATACTACTCGGGTGTGGTCGCTGAAATACCCAATCCAGTCAATAATTATAGGTACCTAGTATTTTTCGACGACGGATACGCTCAGTACGTCCAACATCAATTCACCCGCCTAGTATGTGAGAGCTCTCCCTTAGTATGGGAGGAAGTACATCCATTCTCGCGGGAATTCGTCCGCGAGTACCTGATGGCGTACCCAGAGAGACCCATGGTCAGGCTGCATGAGGGGCAGCATTTGAAGACTGAGTGGAACGGAAAATGGTGGTCATCCCGAGTGACCCGCGTAGACGCGTCGCTGGCCCAAGTGATGTTCGTGGGCGACGGGCGCCGCGAGTGGATCTACCGCGGCTCCACGCGCCTGGCGCCGCTCTACCTCGAGCTGCGCGCCGCCGAGCGCCACCGGCCCAGGCCCATGCCCAGGAGCAAGGCGCAGCCTAGGTTCAATATGCCGTATGTGGAGTACACTCGGTCGGATGAGCAGGAATCGACCAAGCAAGTAGATGCCCAGGCTCAGCAACAACAACAGCAACAACAACAGATACAAAATGAGGAGATACGTCGCCAACGCGCCGTGGCCAAGAAGTCTACCTCAGCACCTCCTCAAGTGCTGCCGCCATCACAACAGGTCATGCCCCCCACACACACGGATCCTGTCACCAGCAGAGTCGTGTACTACACACCAAAGAACGCGGTGAAACCATTGAAGATGGTTCCACACAGATGCGGGACGAGATGCAAGCGAAGCGATGTACTCTCCCTAAAGGAATTGAGGACTTACAATCCACTAGCCAAACCACTACTGAGCGGATGGGAGAGACAAATAGTCCGCTTCAAAGGCCACAAGGAGGTGATGTACCGCGCGCCCTGCGGCCGTCGCTTACGAAACATGCGCGAGCTACATCACTACTTACGTTCAATAGACAGCGACTTGCCTGTAGATCTGTTTGACTTCCACTACTCGACGCATTGTCTAGCGGAGTTCGTGCTCAACAAATGTCTTGTGGGGAAAAAgGACCTCTCCCACGGCAAAGAGAACGTCCCAGTACCCTGCGTGAACTACTACGACGACTCCTTACCGGAGTTCTGTTCGTACAATACCGAACGCACTCCCACCGCCGGCGTGCCGCTCAACCTGGAGTCCGAGTTCCTGTGCGGCTGCGACTGTACCGACGACTGTCAGGATAAATCAAAATGCGCTTGCTGGAAAATGACACTAGAGGGCGCTCGCACCATCGGGCTACGTGGACCTAATGTGGGATATGCGTACAAACGATTGCCTGAACCGTTGCCTTCTGGGATATACGAGTGTAATTCTAGGTGTAAATGCAAGCATACGTGTCTAAATCGCGTGGCGCAGCATCCGCTACAGTTAAAATTACAGgTTTTCAAAACTCCGAATCGTGGTTGGGGTATCCGGGCTCTGAACGACGTTCCCAAAGGATCCTTCCTATGCGTGTACGCCGGCAACCTGCTCACTGATGCCACGGCTAACTTGGACGGTTTGAACGAGGGCGACGAATATCTAGCAGAATTGGATTACATTGAAGTAGTGGAACAAATGAAAGAAGGATACGAAGAAGATATTCCTGAGGCTGATAAGAAATTAGATAACAAGAAAGAAGCTAAGGCTGATGACGACACTGACGAGGATGAACCGTCATCCTCCGAGGATGAGGAGAAGGCCGATAAGAATGACAAGGAAGATGATGATTTCAGACCGGGATACATTGGATTGGGCGTTACGGAGTTCAGCAAACGCCTCCGTAAACGCGAGAAATCATCAAAGAAAGATAAAGAAAAATCGGCGACCGATGAGAAAGAAAAGGAAAAAGATACGAACAAAGACTCTAATGCTGAAGAGGATTGTATTACTATTAGTGATGATGAAGAagTACGAGAACCTTCAAGATTCATGGCGCAAGCAAACATGGGAGCTAGcgaatatatttctaaatacaagtcTGTTCGCACGTTGTTCGGTAAAGACGAGGCGTGCTATATCATGGACGCTAAGGTTCAAGGCAACATTGGCAGATATCTCAATCATTCCTGCTGCCCGAATGTCTTCGTACAAAACGTGTTCGTGGACACCCACGACCCTCGCTTCCCTTGGGTGGCGTTCTTCGCGTTATCTCACATCAAAGCAGGCACCGAGCTCACTTGGAACTACAACTATGACGTGGGTTCCGTTCCCGGGAAGATACTGTACTGTTACTGTGGAGCTCCTAACTGTCGGGGACGGCTgttgtaa
- Protein Sequence
- MDIETVKLSDTSDNEVDVEPTEVQPTVAESSKESEEQKHSPSKSPNNSNISPKQSPSKMKNLAITTQEASSVVNIVDLEESSSSEDEIQEVQKQPEPETTEEDKSPSLESDVTNVKIPTGIDIMCTSGGNTSEITTKDNLSQVVISGVPKPPPHKPARLNTSEVTIKTVSNTEPLIIPETKINEQPQTQSKPKLSLEIFSLDSDDDESAAKEKSTPTSPDKMTALEIEKAKETSKCINYCCTSDSKVPYKQAEASVIAYYDAGRKRRSVVCQPCADVVAARTKNLIQGIKDLTPLLDLDMGKLSQDLVEISDSESEDEDMAPEEPKESIGEKGAKFVEDNLVKFLNDTWKKYDMDVRLKETQIMLDDEIEKLELDSKEIDAMLNECQVATDKLRCDLYATFECRRQQQPSLVIYDTPESKYIGVEEQATPPAAAESTETRQAKRRLSSTSETPAKRPAIPLGYAPLDGGDSKEKAAIPGPDTKLDDDKDISVVKLSAEAAPADLPPPGEISRPPLRVGMPVYAMKNAFGPWLKGRVVEIQPKNTSGGNPFSLCLVKFDHKVKTNGKVLHARCIAYSEPADVRMTIGTRLIALFKDSNKRESYYSGVVAEIPNPVNNYRYLVFFDDGYAQYVQHQFTRLVCESSPLVWEEVHPFSREFVREYLMAYPERPMVRLHEGQHLKTEWNGKWWSSRVTRVDASLAQVMFVGDGRREWIYRGSTRLAPLYLELRAAERHRPRPMPRSKAQPRFNMPYVEYTRSDEQESTKQVDAQAQQQQQQQQQIQNEEIRRQRAVAKKSTSAPPQVLPPSQQVMPPTHTDPVTSRVVYYTPKNAVKPLKMVPHRCGTRCKRSDVLSLKELRTYNPLAKPLLSGWERQIVRFKGHKEVMYRAPCGRRLRNMRELHHYLRSIDSDLPVDLFDFHYSTHCLAEFVLNKCLVGKKDLSHGKENVPVPCVNYYDDSLPEFCSYNTERTPTAGVPLNLESEFLCGCDCTDDCQDKSKCACWKMTLEGARTIGLRGPNVGYAYKRLPEPLPSGIYECNSRCKCKHTCLNRVAQHPLQLKLQVFKTPNRGWGIRALNDVPKGSFLCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEQMKEGYEEDIPEADKKLDNKKEAKADDDTDEDEPSSSEDEEKADKNDKEDDDFRPGYIGLGVTEFSKRLRKREKSSKKDKEKSATDEKEKEKDTNKDSNAEEDCITISDDEEVREPSRFMAQANMGASEYISKYKSVRTLFGKDEACYIMDAKVQGNIGRYLNHSCCPNVFVQNVFVDTHDPRFPWVAFFALSHIKAGTELTWNYNYDVGSVPGKILYCYCGAPNCRGRLL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01441120;
- 90% Identity
- iTF_00622853;
- 80% Identity
- -