Acen030227.2
Basic Information
- Insect
- Atethmia centrago
- Gene Symbol
- retn
- Assembly
- GCA_905333075.2
- Location
- HG995379.1:12225308-12232994[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-20 3.2e-16 61.3 0.0 12 89 16 91 6 91 0.89 2 2 6.5 3e+04 -2.7 0.0 25 38 219 232 181 234 0.58
Sequence Information
- Coding Sequence
- ATGCCACTGTTAATAGATCGACGGTTCATGGCTGCCAGCCCATCTAATAACCAAATACCAGGTACTCCAATCAACCGGCTACCTATAATGGCGAAGTCAGTGCTAGACCTGTATGAGCTGTACAACTTGGTGATAGCTCGCGGAGGGCTGGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCGTCATCTATCACGTCTGCTGCCTTTACGTTACGCACACAGTACATGAAATACCTGTATGACTATGAGTGCGAGAAGAAGAACCTATCCACCAGGAGTGAGCTGGACGCAGCCATAGAAGGAAACAAGCGAGAGGGACGTCGCGCCTCTGGGCAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGTTGTCGCTGTCGCTTGGAGGAGTCGCACCACGCTTgccgccgctgccgccacaCGCACCGCATCTCGCGCAGCACGACATCGAGTACAGAGTGCGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTGATGAGAAATGGCTCCGAATCGCCCCCTAGCAATGGTCCTGCTCCAATAATGTCTCCTCGCGACGCAGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACTCTTTGGTCACTCtacaacaataacaacaacaacagcccACAACCGGACCTCGAGCCACAACGCGAGGCTCTGAACCTCAGCGAGAGCCCCAACTCTCTGACGAGCGGCGGCAAGCGCGAGGCGTGCCGctcgcccgcgccgcccgccaaGCGCCGCACGCCGCGGCCCTCGTCGCGCCCCCCCTCGCGCCCCCCCTCGCCGCGCTCCGACCTGCACTCGCCGCCGCAGCACCGCCACAGCCGCAGGGACGCCACGTCACCGCCACAGATCAACGGCATGCCCAATTCTAATGGTGTTAACGGAGCTGCCTTCAAGATCACTACCAGAGGAGACGCGAGCACAGGCGACCAGCAATTGGTAGTATCTATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTCTTTCCCTCAGGCAACGGTCAAAATGGACACAGACAAATGGTCTCttaa
- Protein Sequence
- MPLLIDRRFMAASPSNNQIPGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPSSRPPSRPPSPRSDLHSPPQHRHSRRDATSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -