Basic Information

Insect: Aromia moschata
Gene Symbol: ham
Assembly: GCA_029963805.1
Location: JAPWTK010000012.1:3212597-3228739[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.017 41 5.1 0.0 11 44 25 55 19 55 0.89

2 8 0.14 3.3e+02 2.2 8.0 14 43 87 113 57 114 0.76

3 8 0.11 2.7e+02 2.5 0.2 19 38 121 137 118 143 0.87

4 8 0.9 2.2e+03 -0.4 3.8 4 38 135 165 132 170 0.78

5 8 1.7 4.1e+03 -1.3 6.1 6 38 165 194 160 198 0.75

6 8 1.4e-05 0.034 15.0 0.1 17 41 513 534 500 536 0.87

7 8 9.8e-06 0.024 15.4 2.0 17 44 541 565 535 565 0.88

8 8 0.25 6.1e+02 1.3 1.6 14 41 567 591 564 593 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.017	41	5.1	0.0	11	44	25	55	19	55	0.89
2	8	0.14	3.3e+02	2.2	8.0	14	43	87	113	57	114	0.76
3	8	0.11	2.7e+02	2.5	0.2	19	38	121	137	118	143	0.87
4	8	0.9	2.2e+03	-0.4	3.8	4	38	135	165	132	170	0.78
5	8	1.7	4.1e+03	-1.3	6.1	6	38	165	194	160	198	0.75
6	8	1.4e-05	0.034	15.0	0.1	17	41	513	534	500	536	0.87
7	8	9.8e-06	0.024	15.4	2.0	17	44	541	565	535	565	0.88
8	8	0.25	6.1e+02	1.3	1.6	14	41	567	591	564	593	0.82

Sequence Information

Coding Sequence: ATGTGTTTGTATCGGGGCTGCGAGGGAGAGGCGTCCCAGCACAGCGGAACAGTCGACGAACGGGAAGATGACGAAGAGGACGACTCCGAAATACGATGTTGCGTGTGCGATCAAGCCTATAACGATGTAGATAAGTTGGACGATCATTTAATCTGTAAGCACAATTATCGCCGAGACGAATTTAGATGTGACTATTGCCCCAAAGCTTATTCCTATCGACCCTGCTTAATCAAACACAGAGCTGTGCAACACGGCGAACACAAGAAGTACCACTGTGAAAACTGTCCCAAGgtgttCACTGATCCCAGCAATCTTCAGAGACACATTAGAACCCACCACGTGGGAGCACGCTCCCACGCTTGTCCAGAGTGTGGAAAAACATTTGCGACCTCGTCAGGTCTGAAGCAACACACCCACATTCACTCTTCTGTGAAACCCTTTCAGTGTGAAGTCTGTTTTAAGGCTTACACGCAGTTTTCCAACCTTTGTCGACACAAGAGAATGCACGCTGATTGCCGCATGCAAATAAAGTGCGGTAAGTGCGGCCAGTCCTTCTCAACGGTGACGTCTCTCTCTAAACACAAACGTTTCTGCGACTCTACCACCCCCACTCCTTCTCTATCCACCACCTCCCAATTATCTTTAAGTCCTATGGCCACCAACAATCCGTTTTCAATTTACAGGCCGCCAGGTTGTCCACTTCCTTTTCCATTTCCACCTCAATTTCCTCCTTACCACCAGATGTTCCCTTCGACTCCGGTCAATTCGCTCATATcccctttattttttaatcaactGCACAAACTGAAAGCGGAAGAGGAACACATGCCGCTGAAGAAAATGAGGTTGAGTCCCGAGAGAATGTCGCCGAAGAGGGAGCGTTTTACGCCTCCTCGAGAGCCATCTGTCGTGGCCAAAGTAAGCCCCCCCACAGCCGCAGAAGCCCATTTGACCCCGTCACCAGCAAGGCCAAACACAATACTTTCTCATCCAAGAGAACAAATCACCATGCAGTCGCCTGAAGAGGAGCACATTCCTAAAGATTTATCGAAGGCTCCAGAGAAGAGTTCCTCCAGACCGTCGTCAGCTAGTAGCGAGGAAGGTGAGAAGCCTCTAGATCTGAGCGGTTGGAAAAAGTCCAGATTAACTCCGGAGACTAAAATTCAAAACGTCGAGAACCGGAGAAGGTCAGCAACTCCACCCAGTTCGCTGAAGGAAGAGAAAATTGACGTAGTGGAGGtcgaggaggaaaaaaaaacttgcgtCGAAAAGGTGTCCGTTACGCCTCCCATGGCATATCCTAGACCGATTCACCCGATGATGCTGGAAATGCGGAATTTCTCATACAACTACCAGACGCACCAGAATAGTGAATCGCTGCTTCCGCCTCCTTTTGGTCACCACCGATTTCCATTCTTGAACGCCTTGCCTCCCCAAAGGCTGGATCTGTTCAGACCCGGGATGCAAGGATTCAGCAGTATCAAACCCTTTCACGACGTGATCCCGCAGCAAAGTCAAGGAAAAATCAAGGATAGATACGCGTGCAAATTCTGCGGAAAAGTTTTTCCCAGATCGGCGAATCTGACCAGACACCTGAGGACCCACACGGGAGAGCAACCCTACAAGTGTCGATATTGCGAGCGATCATTCAGTATCTCGAGTAATTTGCAGAGGCACGTGAGGAACATTCATAACAAAGAAAAACCCTTCAAATGTCCCCTGTGTGAGAGGTGTTTTGGCCAGCAGACCAACTTGGACAGACACCTGAAGAAACACGAGTCTGACGATGGAAACGGCGGGGTCGCAGTAGCCGACTCGCCAGGAAGCAGCAACGAAAACGAAAGGGAAGACGCCTGCTTCGATGAGATAAGGACGTTCATGGGAAAAGTCACCTATGGGGGACAAGACTACTATAATCCGACCACGCTCTATGCTTCGCCAACGAATCACGATATTGACGTAGTAGGAAAGGAAGATGACGATTCGGAGAGCTTTTCAGAGACAGCTGAAGATTACACCAACAACAGGTCGGACTTTGAGTCGAAAATAAAGCAGGAGAAAGAAGAGTTGTTGAATAACAACGACCAGACTATAAAAGTTTCGACttag
Protein Sequence: MCLYRGCEGEASQHSGTVDEREDDEEDDSEIRCCVCDQAYNDVDKLDDHLICKHNYRRDEFRCDYCPKAYSYRPCLIKHRAVQHGEHKKYHCENCPKVFTDPSNLQRHIRTHHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCGKCGQSFSTVTSLSKHKRFCDSTTPTPSLSTTSQLSLSPMATNNPFSIYRPPGCPLPFPFPPQFPPYHQMFPSTPVNSLISPLFFNQLHKLKAEEEHMPLKKMRLSPERMSPKRERFTPPREPSVVAKVSPPTAAEAHLTPSPARPNTILSHPREQITMQSPEEEHIPKDLSKAPEKSSSRPSSASSEEGEKPLDLSGWKKSRLTPETKIQNVENRRRSATPPSSLKEEKIDVVEVEEEKKTCVEKVSVTPPMAYPRPIHPMMLEMRNFSYNYQTHQNSESLLPPPFGHHRFPFLNALPPQRLDLFRPGMQGFSSIKPFHDVIPQQSQGKIKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCRYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHESDDGNGGVAVADSPGSSNENEREDACFDEIRTFMGKVTYGGQDYYNPTTLYASPTNHDIDVVGKEDDDSESFSETAEDYTNNRSDFESKIKQEKEELLNNNDQTIKVST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01227591;
90% Identity: iTF_00166292;
80% Identity: iTF_00166292;