Aage002799.1
Basic Information
- Insect
- Aricia agestis
- Gene Symbol
- -
- Assembly
- GCA_905147365.1
- Location
- LR990257.1:16247452-16247850[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-08 1.2e-05 25.3 0.0 1 35 16 51 16 58 0.90
Sequence Information
- Coding Sequence
- ATGAGTTCTTCGGAGAAAAGAAAGAAGAAGGAAAGGAGAACATACACAGAAGACGATTTAAAGAAAGCGTTAAATGAAATTCGAGAGAAGAATAAATCGGTAAGACAAATATGTAAAGAATATGCTATTCCCAAGACCACAATATTGGATAAAATCAGTGGGCGCAGACCAGATGGAGTAAAGAAACCTGGATCAGAACCAGCGCTAGGAGTAGATGGTGAAAAAAAAGTAGTTGAATGGCTTCTTGATATTTCCAAATGTGGATTTCCAGTGAAAAAGCAAGAATTGTTGAATACTGTTCAGAAAATAATTCGAGATGGGAAGTTTAAAAATAATTTTAAAGATGATCGCCCAGGTCAAAAGTGGTTTGCAAAATTTTTGTTTTTTTTTACCTATTAG
- Protein Sequence
- MSSSEKRKKKERRTYTEDDLKKALNEIREKNKSVRQICKEYAIPKTTILDKISGRRPDGVKKPGSEPALGVDGEKKVVEWLLDISKCGFPVKKQELLNTVQKIIRDGKFKNNFKDDRPGQKWFAKFLFFFTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01091756;
- 90% Identity
- iTF_00164289;
- 80% Identity
- -