Aage021211.1
Basic Information
- Insect
- Aricia agestis
- Gene Symbol
- -
- Assembly
- GCA_905147365.1
- Location
- LR990266.1:11517510-11517905[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-08 1.2e-05 25.3 0.0 1 35 16 51 16 58 0.90
Sequence Information
- Coding Sequence
- ATGAGTTCTTCGGAGAAAAGAAAGAAGAAGGAAAGGAGAACATACACAGAAGACGATTTAAAGAAAGCGTTAAATGAAATTCGAGAGAAGAATAAATCGGTAAGACAAATATGTAAAGAATATGCTATTCCCAAGACCACAATATTGGATAAAATCAGTGGGCGCAGACCAGATGGAGTAAAGAAACCTGGACCAGAACCAGCGCTAGGAGTAGATGGTGAAAAAAAAGTAGTTGAATGGCTTCTTGATATTTCCAAATGTGGATTTCCAGTGAAAAAGCAAGAATTGTTGAATACTGTTCAGAAAATAATTCGAGATGGGAAGTTTAAAAATAATTTTAAAGATCGCCCAGGTCAAAAGTGGTTTGAAAAATTTTTGTTTTTTTTTACCTATTAG
- Protein Sequence
- MSSSEKRKKKERRTYTEDDLKKALNEIREKNKSVRQICKEYAIPKTTILDKISGRRPDGVKKPGPEPALGVDGEKKVVEWLLDISKCGFPVKKQELLNTVQKIIRDGKFKNNFKDRPGQKWFEKFLFFFTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01091756;
- 90% Identity
- iTF_00934692; iTF_00164290; iTF_00164291; iTF_00934691; iTF_00934693; iTF_00934694; iTF_00933682; iTF_00933683; iTF_00933684; iTF_00933680; iTF_00934690;
- 80% Identity
- -