Aleu026360.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Argyra leucocephala
Gene Symbol
sip1
Assembly
GCA_963942445.1
Location
OZ012680.1:136869882-136872428[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.8e-90 5.6e-86 289.7 14.8 1 275 398 664 398 664 0.97
2 2 0.063 1.3e+03 -0.1 0.1 154 190 673 708 668 717 0.68

Sequence Information

Coding Sequence
ATGTCCGATGAAGAATATGAACGTTTTGAAATCACCgattatgatttaaataatgaattcaatataaatCGTCCAAGGAAACGTtacacaaaacaacaacaaatatatgGTATTTGGGCTGATGATAGTGATAACGAAGAAGAAGAACTACCAAGTCGTAAGGGTAGACGTAATAAACAATCTGCATCTAAACAAAAAGATTATTCAGCTCCAGTTAGTTTTGTGGCTGGTGGTATACAACAGGCTGGAAAGaaagatgaagaagaagaagatgatGATGGTAATCAGATAACAGATGAAGAAGATGAACGTCCATCATTTGGTAAAAATCGTCTTGAAGATATCGAAAAAAATTCATCTAGTGAATCTGAAGTTGAAGAAGCACCCAGAGCAGGTTTTGGTTCAAAAAAACCGGCACAAACTGCACAAAGTTCAAATAATGTAGCATCATGGGAAAGGCATACAAAAGGTATTGGTGCTAAACTATTATTACAAATGGGTTATAAACCTGGTAAAGGTTTGGGTAAAGATCTACAAGGTATATCAAGACCAGTGGAAGCGCATGTAAGAAAAGGACGTGGTGCAATTGGTGCTTATGGACCAGAAAAAGCAGCTAGTGTGCCTGGACAACCAGTACGTCCGGCTATCGATGAGGATgttcaagaagaaaaagaatttaaagaaaaattaaatcaatggAAAAAAGGTTCAACAGATAAAAGAGATAAGAAAAAACGATACTATTACAAATCGGTTGAAGAGATTTTAGAAAAGAGTAAAAAACAAGGTGTTTCACATTTTCCAGaagcatataataaaaaaatgagtaATGTTACTGTAATTGATATGACTGGACCAGAAAAACGTGTTCTTAGTGGATATCATGCATTGGGACAAGCCAAAGTAACagatgaagatttatatgaacatcgtccaacaaaaaaaacaacaaacaattttgtattaccAGAATTGatgcataatttaaatttaatagttacAATGTGCGAACAGGAAATAATTGCAGTAGATCGTATCGAAAGGGAAGCaaatgataaacaaaaacaattggaacatgaaaaagaaaatttagaaaaaattgttaaattagaaaaagatcATATAAATACACTGGAATTAGCTTTggatttagttgaaaaattaactgatgctgaaaataatttattaagtttagaAGAggctgaaaaaatatttattaaattacaaacagATTATGCTGCAGAATATAAAGAATTTGGTTTGGGTGATTTGGCAGCTGGCATTATAGCACCAATGATtaataatgaattgaaaaattggaAACCATTAGATGATCCAACAAaacatgttaataaaataaaaaaatggcaaaCAATTTTAGGTATGCATCAATCTGAAATTAGAAGTGTATTTGATCCATATTCTGCAATAATATGGACTGGTGTTGTACCACAATTAAGAATTTGTGCTGCTGATTGGAATCCAAAAATGCATCAAAGAATGGCTGCTCTATTAGACACTTGGGCACCTCTATTTCCAACATGGATTTTAGATAATGTTTTAGAACAattaattttaccaaaattaataTCAGGTGTACAAGAATGGGATCCTTTAACTGATACAATACCAATACATAGTTGGATTTTACCATGGAATGGTATATTAGGACataaaatgattgaattaaTATATCCAACTATTCAAGAGAAATTGGGAGATGCATTAATGGCATGGATACCAAATGATAGATCAGCACTTGCAATGCTTCAACCTTGGCAAGATGCATTTAAATCTGGTGAAATGGAAGCATTTATTGTTCAGCATATTATACCAAAATTAcaattagttttaaatgaattaataataaatccaTTGCAACAAGAATGGGAATTATGGAATCAGGTTTATGAatggaatgaattaatttcacCATTATTAATGGCACAattattagataaatattttttcccaaaatggacacaaactttaattatttggttAAATCAATCACCAAATTTAGAACAAATTTCACAATGGTATACCGGTTGGAAAAGTTTAATTTCTGAAGATATACTAATTCAACCAACAATTAAAGAACATTTTCGAAGAGCTTTAGAAATGATGCATAGAGCAACACAACCATCTTCAATTGATCCACAACCATCAATTCCATTACCTCCTCAAATAATTCAACCATCATCGTGTACAATAGAAAAACCACCAGCATTAATGGATTTACCAATTTTACCACCACCACCAttagaatttaaagaattagtTTCACAAAAATGTGCTGAACGTGGTATAATATTTGTACCTATGCCTGGTCGTAGAGAATTTGGAAAACAggtatatCGTATTGGAAaactattttgttatattgatAGATCTGTTCTTATGGTTAGCGATGGAACTTTCTCAAATTGGATACCAATTTCATTATCAGTGCTGATAGAAAGAGCAATAAGTggataa
Protein Sequence
MSDEEYERFEITDYDLNNEFNINRPRKRYTKQQQIYGIWADDSDNEEEELPSRKGRRNKQSASKQKDYSAPVSFVAGGIQQAGKKDEEEEDDDGNQITDEEDERPSFGKNRLEDIEKNSSSESEVEEAPRAGFGSKKPAQTAQSSNNVASWERHTKGIGAKLLLQMGYKPGKGLGKDLQGISRPVEAHVRKGRGAIGAYGPEKAASVPGQPVRPAIDEDVQEEKEFKEKLNQWKKGSTDKRDKKKRYYYKSVEEILEKSKKQGVSHFPEAYNKKMSNVTVIDMTGPEKRVLSGYHALGQAKVTDEDLYEHRPTKKTTNNFVLPELMHNLNLIVTMCEQEIIAVDRIEREANDKQKQLEHEKENLEKIVKLEKDHINTLELALDLVEKLTDAENNLLSLEEAEKIFIKLQTDYAAEYKEFGLGDLAAGIIAPMINNELKNWKPLDDPTKHVNKIKKWQTILGMHQSEIRSVFDPYSAIIWTGVVPQLRICAADWNPKMHQRMAALLDTWAPLFPTWILDNVLEQLILPKLISGVQEWDPLTDTIPIHSWILPWNGILGHKMIELIYPTIQEKLGDALMAWIPNDRSALAMLQPWQDAFKSGEMEAFIVQHIIPKLQLVLNELIINPLQQEWELWNQVYEWNELISPLLMAQLLDKYFFPKWTQTLIIWLNQSPNLEQISQWYTGWKSLISEDILIQPTIKEHFRRALEMMHRATQPSSIDPQPSIPLPPQIIQPSSCTIEKPPALMDLPILPPPPLEFKELVSQKCAERGIIFVPMPGRREFGKQVYRIGKLFCYIDRSVLMVSDGTFSNWIPISLSVLIERAISG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01224256;
90% Identity
-
80% Identity
-