Axyl010038.1
Basic Information
- Insect
- Archips xylosteana
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_947563465.1
- Location
- OX387365.1:238144-240618[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 3 3.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.016 1.6e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 20 4.7e-07 0.0049 17.6 15.9 3 19 186 202 185 202 0.95 4 20 1.7e-05 0.18 12.6 12.1 3 19 239 255 237 255 0.91 5 20 0.43 4.5e+03 -1.4 1.6 5 10 279 284 279 284 0.91 6 20 3.2e-10 3.3e-06 27.8 13.6 1 19 290 308 290 308 0.99 7 20 2.8e-07 0.0029 18.4 15.6 3 18 345 360 337 361 0.86 8 20 0.3 3.2e+03 -0.9 0.8 1 5 370 374 370 379 0.79 9 20 1.5 1.6e+04 -3.1 1.8 5 10 384 389 384 389 0.93 10 20 8.9e-06 0.093 13.5 18.3 1 18 395 412 395 413 0.97 11 20 2.1e-08 0.00022 21.9 17.3 1 19 422 440 422 440 0.99 12 20 0.00012 1.2 10.0 5.1 9 19 488 498 486 498 0.89 13 20 0.039 4.1e+02 1.9 5.3 3 11 509 517 508 518 0.88 14 20 0.47 4.9e+03 -1.5 3.5 14 18 547 551 547 552 0.87 15 20 0.8 8.3e+03 -2.3 0.1 7 11 567 571 567 573 0.83 16 20 0.0074 77 4.2 5.4 1 11 588 598 582 599 0.91 17 20 1.3 1.3e+04 -2.9 1.5 15 18 613 616 612 617 0.82 18 20 0.0002 2.1 9.3 16.2 1 18 628 645 628 646 0.90 19 20 3 3.1e+04 -6.5 3.4 9 13 652 656 652 656 0.71 20 20 4.7e-06 0.049 14.4 11.9 1 16 687 701 687 707 0.86
Sequence Information
- Coding Sequence
- ATGGCCCGGCGCTACCGCGACGCGGCTGCAAAACTGCAGCAAAATGTGCAGAAACATTTGCAAGGGATGAAGGAGCTCTCTTCGTCGGAAGATGAGGAGGCGTACGAGTCCAGCGTGCTATCGGGGGTGCTGCAAAGCTACCTGCAGGGCGGCGGCGACGCGGGCGCGCTGCGCCGCACGCGCCACATGCTGGAGGAGGCCGCCGGCGGCCGCGCCGTCACTTGCCTCATCTGCATCGGCTCCATCAAGCGCGCTCACGCCATCTGGACGTGCGATCACTGTCACTGCTACTTCCATCTCTCCTGCATCCAGAAATGGTCCAACGACAGCATCAGTCTTCGGAGCGAGGAGACCCACGGCCCCATCGCCGTGTTCAAGCCCCAAAAGATCGAGTGGTGCTGCCCGAAATGTCGTAATTCGTATACCAAAGAGGAGATACCGCGGAAGTACCGTTGTTTCTGTGGCAACACTGACGACCCTCCCTTCCATCCGTGGTTGATTCCGCACACCTGTGGAGAAGTATGTGGGAAAAGATTGTCAACCGGGGACAACTGTAAGCATAAGTGTTTACTACTGTGCCACCCCGGCCCGTGTCCTCCCTGCCCGCAAACCGTTAATGGTGTGTGTTTCTGTGAGAAGGAGCGGAAGAGAGTTCGCTGCAGTGCAGCTAAGTGGTCTTGTGCCCAGCAGTGCAAGAGGTTGCTCTCTTGCAGGTCTCACAAGTGTGAGAACATTTGTCATCCGGACGAGTGCCCCACTTGCAGCTACACTAGTGTGCAACCTTGTCTATGTGGTGCTGAGAAAGAAAAGCGACCATGTAATGATCCCGCCTGGCGATGTCAGAAGCCCTGCAACAAGCCATTTTCCTGTGGCTATCACAAATGTGAACAAGTCTGTCATTCTGGTGACTGTGGCACCTGTCCTAATTCCGGCATGAGGTCATGCCCTTGTGGAGCTAACCAGAGGTTTGTGCAGTGCCCTGATGTCATGGAGACCTGTATGGGTACCTGTGGTAAAACTCAGGAGCTGTGTGAACACACTTGCCCAGAGAAATGCCACAAGGGTGCCTGTCCACCCTGTCTAGTGTTGATTGAAAAACAGTGCCAATGTGGTACACATACGAGATCTCTACCTTGCAGTAAAGAATATAAATGTGAATCAAAATGCAAGGGGATCAGGCCGTGCGGGAAGCACGGCTGTGCCCGCAAGTGCTGCAATGGCAACTGTCCCCCATGTGAAAAAGTCTGTGACAAACCTCTGCAATGTGGCCGCCACAAATGTACTACAGTTTGTCACCATGGCCCGTGCTATCCTTGCCCAAGAGAATCCAAAGTGACTTGCCGATGTAAGGAGACATATGTCACGGTACCATGTGGCAGAGAGAGGCACACAAAACCACCCAAGTGTAGCCTCCCTTGTAAGATTAAGTACAAATGTGGACATGTTGATGAAAATAAGCACTCGTGTCATTTCGGAGACTGCCCTCCGTGCAAAGCCATATGCCACAAAGTTTATGAAAAATGTGAGCATGATTGCAAAGCGATATGTCACGCCTACGTGTCAGTCGTGTTCAAACAGGTGGAGAAACCAGCAACACCCTGGGAAGTGCAGCCACCGAAGACTAAAGTGATGACACTTGATTGTCCGCCATGCGAGATACCCATTCCTATGGTTTGCTTTGGAGAGCATGAGACGGCGCAGCAGGCCTGCCACGCGGCGGCGCGACGGCCCTGCGGGCGCCAGTGCGGCCGCGACCTGCCCTGCACCAAACACAGCTGCAAGCTTCTTTGTCACTTACATGCACCAGATCCCAAATACCCCAATGTCCCTTCATCCTGTGAGCCCTGCAACAGAGACTGTTTGGTGCCGAGACCAGACAGATGCTCCCACAAGTGTGCTAGAGGTGCGTGCCACCCTGGCCCCTGCCCGCCCTGTGAAGTAATCGAAAGAATTCCATGCCACTGTGGTGTTACGGAGCTGTATTTACGATGTCGCGAGCTCTCTATGGCCACTGACGAAATGCTATCATGTAAACAGCAGTGTCCAAAGAATCTGAATTGTGGCCATAGATGCCGGAACCTTTGCCATCCAGGTGCTTGTGGGCAGGATCAAGTCTGCACAAAGAAGACTAAAGTTCATTGCCTGTGCGGCAACCTCAAGAGGGACGCGCCTTGCAACGTGGCGCGGCAGGGCGAGGGCCGGCCCGCCTGCGACGCCACGTGCGAACAGAAACGCATCGCCATGGAATTGGAGAGAGAGAAAGAAGAAAAGAAAAGGAAGGAGATTGAGGAAGAGAAAAATCGGAAGGAGTTGGCTGAATATGAGTGGAAGCTGAGTGGAAAGAAGAAAAAATACAAGGAGAAGAAGGTTGTGACTAACATGGATGACAGAAATTTTCTGCAAAAATATTGGATTCCTATGATGTCAGTTATGGTTGTTATCATAGCTGCTACTTATTTTATATTTTATGTGTAA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLQGMKELSSSEDEEAYESSVLSGVLQSYLQGGGDAGALRRTRHMLEEAAGGRAVTCLICIGSIKRAHAIWTCDHCHCYFHLSCIQKWSNDSISLRSEETHGPIAVFKPQKIEWCCPKCRNSYTKEEIPRKYRCFCGNTDDPPFHPWLIPHTCGEVCGKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGVCFCEKERKRVRCSAAKWSCAQQCKRLLSCRSHKCENICHPDECPTCSYTSVQPCLCGAEKEKRPCNDPAWRCQKPCNKPFSCGYHKCEQVCHSGDCGTCPNSGMRSCPCGANQRFVQCPDVMETCMGTCGKTQELCEHTCPEKCHKGACPPCLVLIEKQCQCGTHTRSLPCSKEYKCESKCKGIRPCGKHGCARKCCNGNCPPCEKVCDKPLQCGRHKCTTVCHHGPCYPCPRESKVTCRCKETYVTVPCGRERHTKPPKCSLPCKIKYKCGHVDENKHSCHFGDCPPCKAICHKVYEKCEHDCKAICHAYVSVVFKQVEKPATPWEVQPPKTKVMTLDCPPCEIPIPMVCFGEHETAQQACHAAARRPCGRQCGRDLPCTKHSCKLLCHLHAPDPKYPNVPSSCEPCNRDCLVPRPDRCSHKCARGACHPGPCPPCEVIERIPCHCGVTELYLRCRELSMATDEMLSCKQQCPKNLNCGHRCRNLCHPGACGQDQVCTKKTKVHCLCGNLKRDAPCNVARQGEGRPACDATCEQKRIAMELEREKEEKKRKEIEEEKNRKELAEYEWKLSGKKKKYKEKKVVTNMDDRNFLQKYWIPMMSVMVVIIAATYFIFYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00023391;
- 90% Identity
- iTF_00326058; iTF_00155925;
- 80% Identity
- -