Acra025575.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Archips crataeganus
Gene Symbol
nfxl1
Assembly
GCA_947859365.1
Location
OX402067.1:16006438-16008912[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 2.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.01 1.5e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 20 3.1e-07 0.0043 17.6 15.9 3 19 186 202 185 202 0.95
4 20 1.2e-05 0.16 12.6 12.1 3 19 239 255 237 255 0.91
5 20 0.29 4e+03 -1.4 1.6 5 10 279 284 279 284 0.91
6 20 1.7e-10 2.3e-06 28.1 12.6 1 19 290 308 290 308 0.99
7 20 1.8e-07 0.0026 18.4 15.6 3 18 345 360 337 361 0.86
8 20 0.2 2.8e+03 -0.9 0.8 1 5 370 374 370 379 0.79
9 20 1 1.4e+04 -3.1 1.8 5 10 384 389 384 389 0.93
10 20 6e-06 0.083 13.5 18.3 1 18 395 412 395 413 0.97
11 20 1.4e-08 0.0002 21.9 17.3 1 19 422 440 422 440 0.99
12 20 7.8e-05 1.1 10.0 5.1 9 19 488 498 486 498 0.89
13 20 0.026 3.7e+02 1.9 5.3 3 11 509 517 508 518 0.88
14 20 0.31 4.3e+03 -1.5 3.5 14 18 547 551 547 552 0.87
15 20 0.53 7.4e+03 -2.3 0.1 7 11 567 571 567 573 0.83
16 20 0.0021 29 5.4 5.6 1 11 588 598 582 599 0.91
17 20 0.84 1.2e+04 -2.9 1.5 15 18 613 616 612 617 0.82
18 20 0.00013 1.8 9.3 16.2 1 18 628 645 628 646 0.90
19 20 2 2.8e+04 -6.5 3.4 9 13 652 656 652 656 0.71
20 20 3.1e-06 0.043 14.4 11.9 1 16 687 701 687 707 0.86

Sequence Information

Coding Sequence
ATGGCCCGGCGCTACCGCGACGCGGCTGCAAAACTGCAGCAAAATGTGCAGAAACATTTGCAAGGGATGAAGGAGCTCTCTTCGTCGGAAGATGAGGAGCCGTACGAGTCCAGCGTGCTGTCGGGGGTGCTGCAGAGCTACCTGCAGGGCGGCGGCGACGCGGGCGCGCTGCGCCGGACGCGCCACATGCTGGAGGAGGCCGCCGGCGGCCGCGCCGTCACCTGCCTCATCTGCATCGGTTCCGTCAAGCGCGCTCACGCCATCTGGACGTGCGACCACTGCCACTGCTACTTCCATCTCTCCTGCATCCAGAAATGGTCCAACGACAGCATCAGCCTTCGGAGCGAGGAGACACACGGCCCCATCGCCGTGTTCAAGCCCCAAAAGATCGAGTGGTGCTGCCCGAAATGTCGTAATTCGTATACCAAAGAGGAGATACCGCGGAAGTACCGTTGTTTCTGTGGCAACACTGACGACCCTCCCTTCCATCCGTGGTTGATTCCGCACACCTGTGGTGAAGTATGTGGGAAAAAATTGTCAACCGGGGACAACTGTAAGCATAAGTGTTTACTACTATGCCACCCCGGCCCGTGTCCTCCCTGCCCACAAACCGTTAATGGTGTGTGTTTCTGTGAGAAGGAGCGGAAGAGAGTTCGCTGCAGTGCAGCTAAGTGGTCTTGTGCCCAGCAGTGCAAAAGGTTGCTCTCTTGCAGGTCTCACAAGTGTGAGAACATTTGTCACCCGGATGAGTGCCCCACTTGCAGCTACACTAGTGTGCAACCTTGTCTGTGTGGTGCTGAGAAAGAAAAGCGACCATGTAATGATCCCGCCTGGCGATGTCAGAAGCCCTGCAACAAGCCATTTTCCTGTGGCTATCACAAATGTGAACAAGTCTGTCATTCTGGTGACTGTGGCGTCTGTCCTAATTCCGGCATGAGGTCGTGCCCTTGTGGAGCTAACCAGAAGTTTGTGCAGTGCCCTGATGTCATGGAGACCTGCATGGGTACCTGTGGTAAAACTCAGGAGCTGTGTGAACACACTTGCCCAGAGAAATGCCACAAGGGTGCCTGTCCACCCTGTCTAGTGTTGATTGAAAAACAGTGCCAATGTGGTACACATACGAGATCTCTACCTTGCAGTAAAGAATATAAATGTGAATCAAAGTGCAAGGGGATCAGGCCGTGCGGAAAGCACGGCTGTGCCCGCAAGTGCTGCAATGGCAACTGTCCCCCATGTGAAAAAGTCTGTGACAAACCTCTGCAATGTGGCCGCCACAAATGTACTACAGTTTGTCACCACGGCCCATGCTATCCTTGCCCGAGGGAATCCAAAGTGACTTGTCGCTGCAAGGAGACTTATGTCACGGTACCATGTGGCAGAGAGAGGCACACAAAACCCCCCAAGTGTAGCCTCCCTTGTAAGATTAAATACAAATGTGGACATGTTGATGAAAATAAGCACTCGTGTCATTTCGGAGACTGCCCTCCGTGCAAAGCCATATGCCACAAAGTTTATGAAAAATGTGAGCATGATTGCAAAGCGATATGTCACGCTTACGTGTCAGTCGTATTCAAACAGGTGGAGAAACCTGCAACACCCTGGGAAGTGCAGCCACCAAAGACTAAAGTGATGACACTTGATTGTCCGCCGTGCGAGGTACCCATTCCTATGGTTTGCTTCGGAGAGCACGAGACGGCGCAGCAGGCCTGCCACGCGGCGGCGCGGCGGCCCTGCGGGCGCCAGTGCGGCCGCGACCTGCCCTGCACCAAACACAGATGCAAGCTTCTTTGTCACTTATATGCACCAGATCCCAAATACCCCAACGTTCCTTCATCCTGTGAGCCCTGCAACAGAGACTGTTTGGTGCCAAGACCAGACAGATGCTCCCACAAGTGTGCTAGAGGTGCGTGCCACCCTGGCCCCTGCCCACCCTGTGAAGTAATCGAAAGAATTCCATGCCACTGTGGTGTTACGGAGCTGTATTTACGATGTCGCGAGCTCTCTACGGCCACTGAAGAAATGCTATCATGTAAACAGCAGTGTCCAAAGAATCTGAATTGTGGCCATAGATGCCGGAACCTTTGCCATCCAGGTGCTTGTGGGCAGGATCAAGTCTGTACAAAGAAGACTAAAGTTCATTGCCCGTGCGGCAACCTCAGGAGGGACGCGCCTTGCAACGTGGCCCGGCAGGGCGAGGGCCGCCCCGCCTGCGACGCCGCGTGCCAACAGAAACGCATCGCCATGGAATTAGAGAGAGAGAAAGAAGAAAAGAGAAGGAAGGAGATTGAGGAGGAGAAAAATCGGAAGGAGCTGGCTGAATATGAGTGGAAGCTGAGTGGGAAGAAGAAAAAATACAAGGAGAAGAAGGTTGTGACTAACATGGATGACAGAAATTTTCTGCAAAAATATTGGATTCCAATGATGTCAGTTATGGTTGTTATCATGGCTGCTACTTATTTTATATTTTATGTGTAA
Protein Sequence
MARRYRDAAAKLQQNVQKHLQGMKELSSSEDEEPYESSVLSGVLQSYLQGGGDAGALRRTRHMLEEAAGGRAVTCLICIGSVKRAHAIWTCDHCHCYFHLSCIQKWSNDSISLRSEETHGPIAVFKPQKIEWCCPKCRNSYTKEEIPRKYRCFCGNTDDPPFHPWLIPHTCGEVCGKKLSTGDNCKHKCLLLCHPGPCPPCPQTVNGVCFCEKERKRVRCSAAKWSCAQQCKRLLSCRSHKCENICHPDECPTCSYTSVQPCLCGAEKEKRPCNDPAWRCQKPCNKPFSCGYHKCEQVCHSGDCGVCPNSGMRSCPCGANQKFVQCPDVMETCMGTCGKTQELCEHTCPEKCHKGACPPCLVLIEKQCQCGTHTRSLPCSKEYKCESKCKGIRPCGKHGCARKCCNGNCPPCEKVCDKPLQCGRHKCTTVCHHGPCYPCPRESKVTCRCKETYVTVPCGRERHTKPPKCSLPCKIKYKCGHVDENKHSCHFGDCPPCKAICHKVYEKCEHDCKAICHAYVSVVFKQVEKPATPWEVQPPKTKVMTLDCPPCEVPIPMVCFGEHETAQQACHAAARRPCGRQCGRDLPCTKHRCKLLCHLYAPDPKYPNVPSSCEPCNRDCLVPRPDRCSHKCARGACHPGPCPPCEVIERIPCHCGVTELYLRCRELSTATEEMLSCKQQCPKNLNCGHRCRNLCHPGACGQDQVCTKKTKVHCPCGNLRRDAPCNVARQGEGRPACDAACQQKRIAMELEREKEEKRRKEIEEEKNRKELAEYEWKLSGKKKKYKEKKVVTNMDDRNFLQKYWIPMMSVMVVIMAATYFIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00023391;
90% Identity
iTF_00156876;
80% Identity
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