Basic Information

Insect: Apomyelois bistriatella
Gene Symbol: -
Assembly: GCA_947044225.1
Location: CAMRHB010000019.1:2903274-2912716[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.7 3.1e+02 2.5 0.2 1 23 92 115 92 115 0.94

2 18 0.37 25 6.0 0.2 3 23 120 140 118 140 0.96

3 18 0.011 0.73 10.8 0.1 2 23 144 166 143 166 0.96

4 18 0.3 20 6.3 1.9 2 23 400 422 399 422 0.95

5 18 0.062 4.1 8.5 0.6 1 21 430 450 430 451 0.94

6 18 0.0019 0.13 13.2 0.7 2 23 461 482 460 482 0.95

7 18 9.6 6.5e+02 1.6 0.3 1 21 498 518 498 521 0.71

8 18 0.072 4.9 8.2 4.2 1 20 530 549 530 553 0.89

9 18 0.12 8 7.6 0.9 3 23 632 653 630 653 0.91

10 18 2.3e-05 0.0016 19.2 2.2 1 23 687 709 687 709 0.97

11 18 4.7e-05 0.0032 18.3 1.6 1 23 716 738 716 738 0.99

12 18 9.2e-05 0.0062 17.3 2.3 1 23 743 765 743 765 0.96

13 18 0.002 0.13 13.1 3.4 1 23 771 793 771 793 0.98

14 18 1.9e-06 0.00013 22.7 1.4 1 23 799 821 799 821 0.98

15 18 0.00091 0.061 14.2 1.7 2 23 828 849 828 849 0.98

16 18 0.00014 0.0095 16.8 0.6 2 23 857 879 856 879 0.97

17 18 0.00068 0.046 14.6 3.4 1 23 884 906 884 906 0.98

18 18 0.00054 0.036 14.9 3.8 1 23 912 935 912 935 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.7	3.1e+02	2.5	0.2	1	23	92	115	92	115	0.94
2	18	0.37	25	6.0	0.2	3	23	120	140	118	140	0.96
3	18	0.011	0.73	10.8	0.1	2	23	144	166	143	166	0.96
4	18	0.3	20	6.3	1.9	2	23	400	422	399	422	0.95
5	18	0.062	4.1	8.5	0.6	1	21	430	450	430	451	0.94
6	18	0.0019	0.13	13.2	0.7	2	23	461	482	460	482	0.95
7	18	9.6	6.5e+02	1.6	0.3	1	21	498	518	498	521	0.71
8	18	0.072	4.9	8.2	4.2	1	20	530	549	530	553	0.89
9	18	0.12	8	7.6	0.9	3	23	632	653	630	653	0.91
10	18	2.3e-05	0.0016	19.2	2.2	1	23	687	709	687	709	0.97
11	18	4.7e-05	0.0032	18.3	1.6	1	23	716	738	716	738	0.99
12	18	9.2e-05	0.0062	17.3	2.3	1	23	743	765	743	765	0.96
13	18	0.002	0.13	13.1	3.4	1	23	771	793	771	793	0.98
14	18	1.9e-06	0.00013	22.7	1.4	1	23	799	821	799	821	0.98
15	18	0.00091	0.061	14.2	1.7	2	23	828	849	828	849	0.98
16	18	0.00014	0.0095	16.8	0.6	2	23	857	879	856	879	0.97
17	18	0.00068	0.046	14.6	3.4	1	23	884	906	884	906	0.98
18	18	0.00054	0.036	14.9	3.8	1	23	912	935	912	935	0.98

Sequence Information

Coding Sequence: ATGACTTCAGATGATTCTGACGATGAACCACTTTCAACGTTAGCAGCAGCAAAGAAGACTGACAGAAATAGTTCCGACGGAGAAGCTATTAATTCGGAtcctaatgatgatgaatataaaccagtgaagaaaaagaagaaaaagtcaATCTCCAGGCCCAAAATTTCATTGACTATAAGGCTTAAAGGAAAGGCAGATAAACAGGTACCGAAAATTATTGAGCGCCCTTCTGATGTATGGTTGTACATGAAAGATTTAAATCCAGCAGGGCCATTTAGTTGCTTACTGTGCTCAGAATGGTTTATAAACAGAACTAAGATGATAGTGCACTATATAATAAACCATAAGAAGGACTTTTGTGGAATCTGCAGatattttgTATCTGATCGGACGGCCTGGTTGGAACACATGAAGTTCCACGTACCATGGCCTTGCTCACAATGTGTAGAGAATTTTCAAACTGAAGAAGAACTACGCCAGCATCTCAGCACCATTCACAAATTAGTGCATTGCAGACTATGCCACTTTAGAATGCCTGCTGATGACCAATATAACACccatctaataaaaaaacataacgtAACAAATGTGACCAGCAAGGAAGAGGAAACACTGTGGGAACTGGAGTTTGAAGGCGGCACTAAATTTCTATGTCTTCTCTGTTCTAAGTCCAATAATCCAGGTCAAGCATTCTTCAGCCATTATATGGGTTTTCACCACTTCACCCTAAAATGCTTCACGAAAATAATTTCTGGTCGTGATCCTCCATTCGCTGTCTTCGGAGCTCAGGTCAGCTCTCAATTCATTGAAAATCAGTTGAAAACTCAAATTCGTTTTGGGTATGTTGAGTTGGAAAATAAACAGAGTGAAATTCCTGAGGTTGAATCCAGTGATGCCCAGGCTTTGCTGAAAGCCCTTATTCCGGAAATAAAGCAAGAGCTCAATAGTGATGGTGAAGACAAAGAAGCCGAGGAAGCAAGTAAAGCAGATGATGAAATAGATGAACAACGTAATGAAATATTGAAGTCATATAAAGGTGATGAAGATTTTGACGTAACACTAGTGGAATTGATCATTATGGAAAAGAGCTATGTTGAGTATCTTAATCATACATTACTTGATATCAATGCAAATGTTGTGCCCGAAGTATCCGATATAGAATATGATTCCTTAAAGGCAGAGTTTCCAGCAGAAGTCTCATGTGGATTGTGCGGCACTAGACATTCTACACCGTTCACATTCACTACACATATGAGCAAAATGCATTTGATGAAGTCATTACCTGTGTATTGCTGCAGGGTATGCGCAACTACTTTTGAGAGTAAAAATGAACTTGATTCTCATATAAATGAAGAGTTGGGTGAATTTGATGATCTGTGGATATGTCAGTTTTGTGACAAAGAGTTTGATAACAGGGAGTCTACAAGACGGCACTTGAATGAGCATTTTGATGAGTTGGAATTTGACAATTGCTTCAGTCCGCACTTGGGCTTCAAATGTAGGTATTGCCCGATGTTGTTTTGGAACGAGCCTGACAGGGAATCACATCAAGTGCGAGTCCATTTCGAAGCTAACAAGGAAGATTACTACAAATGTCGAATTTGTTCTGAAACTTTTAGTGACAAGGTGTTCTTCGTCCACCATTTCTTTGAGAAACACCAAAGCACGGAATCCGAGCCCCCCACTCATCTTCTAAAGTGCTGCCGATGTTGTCTCGTACTCTCCACCGTGGACGAGATGCGAAGTCATTTCAATGAGAATCATCCCGAAGCACGAAAGATATTCTGCTCATTTGATGCTTGCTTGTATAAGCCTCTTAGTCATATGAAGTCTTTTAAATATCATTTGAAGTTAGTCCACGCTTCCGGTAACCGAGTGGACCGCAAGATCAACTGTACGATCTGCGAGCGAGAGTTCTCCAGCTCCCGCGCATGCAGCACCCACATGGCGCAGGCGCATGGCCCGGGGAGGTACAAGTGCAAGCTGTGCAAGGAGCTCATGCACACTTCTGATGAGAGGAAGCTCCACTATCTACTGCTTCATCCCGGGCGCCACCCGTTCGAATGCAAGGACTGCGGCAAATCCTTCCAGTACAAGTCTTCGTTGTACATGCACAAACAGGAGCACGTGCCTAACAAACAGATATACAAGTGCGACGAATGTGGGAAGACTTTCTTGAAAAAGGACTCTTTTCGCGAACATCAGCAGATCCACGAAGGGCCACGGCACGCGTGCTCGTATTGCCCGATGCGTTTCGTTCAACGCTCCAACATGTTGCGACACGAACGCAGGCATACGGGCGAAAGACCTTACGCGTGCCAACATTGCCCACGGACTTTTGCTGATAAAGGAGCGTGTACGTCGCATACAAGGACGCACTCGAGAGAAACGTCATACGCTTGCCTGTACTGCGGACAAACGTTCGTGCAGAAATCAAAACTCACTTATCACATAAGGAAACACACAGGAGAGAATTTGGAGACGTGCCCAATATGTTCCAAGCTGTTCACTAGTGGGTGCTCTTTGCGGGAACATATGAAGATTCACGACGGCAAAAAGGGCTCTATAAAGTGTCCACTATGCGACAAGAGCTACCAAGACGAGCGTTATATGCTCCGTCACTTGCGCACGAATCACACGAGTGCCCAGTACTCGTGTCCCATCTGCCACAAGCCCAGTTCCACGTGCACCAGTCTCAAATATCACGTCATCACTCACAGCGCCGTCAATACCTTCAAGtGTAAAATCTGTCCGAAATCATGCGCAGTTAAGAAAACAATGGTCAAGCATCTTCGCAAACGACACAGCTTGAGGGACGCAGAGGTCACCATGAAGGACTTCTACGAGCGAGTTGACCCCTGGGACTGCAAGCTAGGCCTCGATGATGACGTCATGACCAAAATATTCGGACCCCCAAAGACTACGCATCAACTAATAGTCTCCGACACAAATAAGGCTGGTGATGGCGAGGGGGAAGGTTCCGGAAAGAAAACCCACGAGGTAATGATAAAGAATGAGCAGCCGAGTGAAGATGAGAACGAACAGGAATTGGAACCGACTGACTTCGTCACAGTTAAGATTGAACCGTGTTTTGATGACGAGAAATAG
Protein Sequence: MTSDDSDDEPLSTLAAAKKTDRNSSDGEAINSDPNDDEYKPVKKKKKKSISRPKISLTIRLKGKADKQVPKIIERPSDVWLYMKDLNPAGPFSCLLCSEWFINRTKMIVHYIINHKKDFCGICRYFVSDRTAWLEHMKFHVPWPCSQCVENFQTEEELRQHLSTIHKLVHCRLCHFRMPADDQYNTHLIKKHNVTNVTSKEEETLWELEFEGGTKFLCLLCSKSNNPGQAFFSHYMGFHHFTLKCFTKIISGRDPPFAVFGAQVSSQFIENQLKTQIRFGYVELENKQSEIPEVESSDAQALLKALIPEIKQELNSDGEDKEAEEASKADDEIDEQRNEILKSYKGDEDFDVTLVELIIMEKSYVEYLNHTLLDINANVVPEVSDIEYDSLKAEFPAEVSCGLCGTRHSTPFTFTTHMSKMHLMKSLPVYCCRVCATTFESKNELDSHINEELGEFDDLWICQFCDKEFDNRESTRRHLNEHFDELEFDNCFSPHLGFKCRYCPMLFWNEPDRESHQVRVHFEANKEDYYKCRICSETFSDKVFFVHHFFEKHQSTESEPPTHLLKCCRCCLVLSTVDEMRSHFNENHPEARKIFCSFDACLYKPLSHMKSFKYHLKLVHASGNRVDRKINCTICEREFSSSRACSTHMAQAHGPGRYKCKLCKELMHTSDERKLHYLLLHPGRHPFECKDCGKSFQYKSSLYMHKQEHVPNKQIYKCDECGKTFLKKDSFREHQQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACQHCPRTFADKGACTSHTRTHSRETSYACLYCGQTFVQKSKLTYHIRKHTGENLETCPICSKLFTSGCSLREHMKIHDGKKGSIKCPLCDKSYQDERYMLRHLRTNHTSAQYSCPICHKPSSTCTSLKYHVITHSAVNTFKCKICPKSCAVKKTMVKHLRKRHSLRDAEVTMKDFYERVDPWDCKLGLDDDVMTKIFGPPKTTHQLIVSDTNKAGDGEGEGSGKKTHEVMIKNEQPSEDENEQELEPTDFVTVKIEPCFDDEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00720685; iTF_00073123; iTF_01220980;
90% Identity: iTF_00720685;
80% Identity: -