Basic Information

Insect: Euzophera pinguis
Gene Symbol: -
Assembly: GCA_947363495.1
Location: OX376164.1:3803890-3814378[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.6 2.8e+02 2.9 0.3 1 23 93 116 93 116 0.95

2 18 0.53 42 5.5 0.0 3 23 121 141 119 141 0.96

3 18 0.011 0.84 10.8 0.1 2 23 145 167 144 167 0.96

4 18 0.32 25 6.2 2.0 2 23 402 424 401 424 0.95

5 18 0.011 0.84 10.8 0.5 1 21 432 452 432 453 0.95

6 18 0.0018 0.14 13.2 0.7 2 23 463 484 462 484 0.95

7 18 9.5 7.4e+02 1.6 0.3 1 21 500 520 500 523 0.71

8 18 0.093 7.3 7.9 4.0 1 20 532 551 532 555 0.89

9 18 0.12 9.1 7.6 0.9 3 23 634 655 632 655 0.91

10 18 4.6e-05 0.0036 18.3 2.2 1 23 689 711 689 711 0.96

11 18 3.2e-05 0.0025 18.8 1.6 1 23 718 740 718 740 0.99

12 18 9.1e-05 0.0071 17.3 2.3 1 23 745 767 745 767 0.96

13 18 0.002 0.16 13.1 3.4 1 23 773 795 773 795 0.98

14 18 1.9e-06 0.00015 22.7 1.4 1 23 801 823 801 823 0.98

15 18 0.0009 0.07 14.2 1.7 2 23 830 851 830 851 0.98

16 18 0.00037 0.029 15.4 2.1 2 23 859 881 858 881 0.97

17 18 0.00067 0.053 14.6 3.8 1 23 886 908 886 908 0.98

18 18 0.00093 0.073 14.2 3.8 1 23 914 937 914 937 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.6	2.8e+02	2.9	0.3	1	23	93	116	93	116	0.95
2	18	0.53	42	5.5	0.0	3	23	121	141	119	141	0.96
3	18	0.011	0.84	10.8	0.1	2	23	145	167	144	167	0.96
4	18	0.32	25	6.2	2.0	2	23	402	424	401	424	0.95
5	18	0.011	0.84	10.8	0.5	1	21	432	452	432	453	0.95
6	18	0.0018	0.14	13.2	0.7	2	23	463	484	462	484	0.95
7	18	9.5	7.4e+02	1.6	0.3	1	21	500	520	500	523	0.71
8	18	0.093	7.3	7.9	4.0	1	20	532	551	532	555	0.89
9	18	0.12	9.1	7.6	0.9	3	23	634	655	632	655	0.91
10	18	4.6e-05	0.0036	18.3	2.2	1	23	689	711	689	711	0.96
11	18	3.2e-05	0.0025	18.8	1.6	1	23	718	740	718	740	0.99
12	18	9.1e-05	0.0071	17.3	2.3	1	23	745	767	745	767	0.96
13	18	0.002	0.16	13.1	3.4	1	23	773	795	773	795	0.98
14	18	1.9e-06	0.00015	22.7	1.4	1	23	801	823	801	823	0.98
15	18	0.0009	0.07	14.2	1.7	2	23	830	851	830	851	0.98
16	18	0.00037	0.029	15.4	2.1	2	23	859	881	858	881	0.97
17	18	0.00067	0.053	14.6	3.8	1	23	886	908	886	908	0.98
18	18	0.00093	0.073	14.2	3.8	1	23	914	937	914	937	0.98

Sequence Information

Coding Sequence: ATGACCTCAGATGATTCTGACGATGAACCGCTTTCAATGTTAGCAGCAGCAAAGAAGACGAGCCGAAATAGTTCCGATGAAGAAACTGTTAATTCGGACCCAAATGATGATGAATATAAACCAGTGAAAAAAAAGAAGAAAAAGTTAATCCCCAGGCCTAAAATTTCTTTGACTATAAGGCTTAAAGGAAACGGTTCAGAAAAACAGCTACCGAAGATTATTGAGCGCCCTACAGATGTATGGCTGTACATGAAAGATTTGAATCCGGCTGGGCCATTTAGTTGTTTACTGTGCTCAGAATGGTTTATAAATAGGACCAAGATGATAGTGCACTACATAATGAACCATAAGAAAGACTTTTGTGGTATCTGCAGATATTTTGTACCTGATCGAGCGGCTTGGTTAGCACACATGAAGTTCCATGTACCATGGCCTTGCTCACAATGTGTGGAGAACTTCCAAACTGAAGAAGAGCTACGCCAGCATCTTAGCACCATTCACAAGTTAGTGCATTGCAGACTATGTCACTTTAGAATGCCTGACGATGACCAATATAACAACCATCTTATAAAAAAACATAACATAACAAATGTGACCAGCAAGAATGAGGAGGTTATGTGGGAGCTGGAGTTTGAAGGTGGCAATAAATTTCTATGTCTTCTCTGTTCTAAATCCAATAATCCGGCTCAAGCATTCTTTAGCCACTACATGGGTTTTCACCATTTCACCCTAAAATGCTTTACGAAAATTATTTCTGGTCGTGATCATCCATTTGCTATATTTGGAGCCCAGGTCAGCTCTCAGTTCATTGAAAATCAGTTGAAAACTCAAATGAGGTTTGGGTATGTCGAGTTGGAAAATAAACATAGTGAAATGCCTGAGGTCGAATCCAGCGATGCTCAGGCATTGCTTAAAGCTCTTATACCAGAAATAAAGCAAGAGCTAGATAGTGATAATGAGGACAAAGACAATGAGGAAGCAACAAATAAAGCAGATGACGAAATAGATGAACAACGTAATGAAATATTAAAGTCATATAAAGGTGATGAAGATTTCGATGTAACCCTGGTTGAGCTGATCATTATGGAAAAAAGCTATGTTGAGTATCTTAACCATACATTACTTGATATCAATGCGAATGTTCTCCCAGAAGTATCAGATATAGAATATGATTCGATTAAGGCAGAATTTCCGGCAGAAGTTTCATGTGGACTATGCGGCACAAGGCACACTACACCATTCACATTCACTACACATATGAGCAAAATGCATTTGATGAAGTCATTGCCAGTGTACTGCTGTCGTGTATGTGCAACTACTTTTGAGAGTAAAAATGAACTCGAATCTCATATAAATGAAGAGTTGGGTGAATTTGATGATCTGTGGATATGTCAGTTTTGTGACAAAGAGTTTGATAACCGGGAGTCAACAAGACGTCACTTGAATGAGCATTTCGATGAGTTGGAGTTTGACAATTGCTTCAGTCCTCACTTGGGCTTCAAATGCAGGTATTGCCCAATGTTGTTTTGGAATGAGCCCGATAGAGAATCGCACCAAGTGAGAGTCCACATTGAAGCTAACAAGGAAGACTTTTATCAGTGTCAACTTTGTTCTGAAACTTTCAGTGATAAGGTGTTCTTTGTCCACCACTTCTTCGAGAAACACCAAAGTACGGAGTCAGAGCCTCCCACTCACCTGCTAAAGTGCTGCCGATGTTGTCTCGTACTCACCACCATCGACGAGATGAGGAGTCATTTCAATGAAAATCATCCCGATGCACGAAAGATATTCTGCTCATTTGACGCTTGCTTGTACAAGCCTCTTAGTCATATGAAGTCTTTTAAATATCATTTGAAGCTAGTCCATGCAACCAGCAACCGAGTAGACCGCAAAATCAACTGTACAATTTGCGAGAGAGAATTCTCCAGTTCCCGCGCTTGCAGTACTCACATGGCACAGGCGCACGGCCCGGGCAGGTACAAGTGTAAGCTGTGCAAGGAGCTCATGCACACCAGTGATGAGAGGAAGCTCCATTACCTACTGCTTCACCCCGGCCGCCACCCGTTCGAATGCAAAGAGTGCGGCAAGTCCTTCCAGTACAAGTCTTCGCTGTACATGCACAAACAGGATCACGCGCCAAACAAACAGACATACAAGTGCGATGATTGTGGGAAGACTTTCTTGAAAAAGGACTCGTTTCGCGAACATCAGCAGATTCACGAAGGTCCACGCCACGCTTGTTCGTATTGTCCCATGCGTTTCGTTCAACGGTCCAACATGTTACGTCACGAACGAAGACATACGGGCGAAAGGCCCTATGCGTGTCAACATTGCCCACGAACTTTTGCTGATAAAGGAGCGTGTACGTCGCATACAAGAACGCATTCAAGGGAAACTTCCTACGCTTGCCTGTACTGTGGACAAACGTTCGTGCAGAAATCCAAATTAACATATCATATCAGAAAACATACGGGAGAGAATTTGGAGACGTGCCCAATATGCTCCAAGCTGTTTACCAGTGGATGTTCTCTGCGGGAACATATGAAGATTCACGACGGCAAGAAGGGCTCTATAAAGTGTCCACTTTGCGACAAATGCTACCAGGACGAGCGTTACATGTTACGTCACTTGCGGACAAACCACACGAGCGCTCAATATTCGTGTCCCATCTGTCACAAGCCCAGTTCTACTTGTACCAGTCTCAAATACCACGTGTTAACTCACAGTGCTGTCAATACATTCAAGTGCAAAATCTGCCCAAAATCGTGCGCAGTAAAGAAAACAATAATGAAGCATCTTCGCAAACGACACTCTTTGAGGGATTCAGAGGTCACAATAAAAGATTTCTACGAGCGAGTTGACCCCTGGGATTGTAAACTAGACTTAGATGATGACGTCATGACCAAAATATTCGGGCCGCCAAAGATAAAGCCGCAAATAATTGTGTCTGATAACACTGCAGGTAATGGAGAAGGGACAAGTGAAAAGACACACGAAGTCATGATAAAGAATGAATTGGCGAGTGAAGATGAAAATGAGCAGGAATTAGAACCCACGGACTTTGTGACTGTTAAGATTGAACCGCATTTAGATGAAGAACAGTGA
Protein Sequence: MTSDDSDDEPLSMLAAAKKTSRNSSDEETVNSDPNDDEYKPVKKKKKKLIPRPKISLTIRLKGNGSEKQLPKIIERPTDVWLYMKDLNPAGPFSCLLCSEWFINRTKMIVHYIMNHKKDFCGICRYFVPDRAAWLAHMKFHVPWPCSQCVENFQTEEELRQHLSTIHKLVHCRLCHFRMPDDDQYNNHLIKKHNITNVTSKNEEVMWELEFEGGNKFLCLLCSKSNNPAQAFFSHYMGFHHFTLKCFTKIISGRDHPFAIFGAQVSSQFIENQLKTQMRFGYVELENKHSEMPEVESSDAQALLKALIPEIKQELDSDNEDKDNEEATNKADDEIDEQRNEILKSYKGDEDFDVTLVELIIMEKSYVEYLNHTLLDINANVLPEVSDIEYDSIKAEFPAEVSCGLCGTRHTTPFTFTTHMSKMHLMKSLPVYCCRVCATTFESKNELESHINEELGEFDDLWICQFCDKEFDNRESTRRHLNEHFDELEFDNCFSPHLGFKCRYCPMLFWNEPDRESHQVRVHIEANKEDFYQCQLCSETFSDKVFFVHHFFEKHQSTESEPPTHLLKCCRCCLVLTTIDEMRSHFNENHPDARKIFCSFDACLYKPLSHMKSFKYHLKLVHATSNRVDRKINCTICEREFSSSRACSTHMAQAHGPGRYKCKLCKELMHTSDERKLHYLLLHPGRHPFECKECGKSFQYKSSLYMHKQDHAPNKQTYKCDDCGKTFLKKDSFREHQQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACQHCPRTFADKGACTSHTRTHSRETSYACLYCGQTFVQKSKLTYHIRKHTGENLETCPICSKLFTSGCSLREHMKIHDGKKGSIKCPLCDKCYQDERYMLRHLRTNHTSAQYSCPICHKPSSTCTSLKYHVLTHSAVNTFKCKICPKSCAVKKTIMKHLRKRHSLRDSEVTIKDFYERVDPWDCKLDLDDDVMTKIFGPPKIKPQIIVSDNTAGNGEGTSEKTHEVMIKNELASEDENEQELEPTDFVTVKIEPHLDEEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00146740;
90% Identity: iTF_00146740;
80% Identity: -