Aluc000514.1
Basic Information
- Insect
- Apolygus lucorum
- Gene Symbol
- lov
- Assembly
- GCA_009739505.2
- Location
- CM019181.2:10872849-11035891[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-18 2.9e-15 55.8 0.0 1 44 378 421 378 422 0.96
Sequence Information
- Coding Sequence
- ATGAGTTCCCCGCACTACAGCCTCCGCTGGAACAACCACCAGAGTCACCTCCTCACGGCCTTCGACTCTCTGCTTCAGAACGAGACCCTAGTCGACGTGACGCTCGTCTGCGAAGAGTCGAGCTTCAAGGCGCACAAGGTCGTCCTCTCCGCCTGCAGCCCGTACTTCCAACGGATTTTCTCCGAAACGCCGTGCAAGCATCCGGTGATCGTATTGAAAGATCTTCGAGGATGGGAGGTTCAAGCCATCGTAGACTTCATGTACCGGGGAGAAATAAGCGTAGGTCAAGAACAACTCAGCTCCTTGATAAAAGCCGCTGAATCGTTACAGGTGCGAGGGTTGGCTCACACGGAGCGGATCCCCGTGCTGACCTCCGAGAAGACGCCGACTCACCCCAGGGAGCGCTGCTTCTCGCCCACGACGCCGCCGCACCACCAGTTCAACGGTCCGCAGGGCGGCGCTCCTCACTCCATGCGGCTCCCGCAGatcccccacctccccaacatCTCCTTCAGCGAAATGCCGGAACGACACTGCACTTCGCCGATGCCCCGCCGGAAACAGGCGAGGCCGAGGAGGCGGTCGGGCGACACCAGCGGGCCCCAGGACCTGACCAAGACACCCAACTCCCCGCCCAGACTATCAGACATGGCGGAAAACCTCTCCCTGAAAAAAAGTAtcaacaataataacaacagcaacaacaacaataacaaccCACCTTCCCGTCAGAACTCCACGCCGACGCCACCAGGAATGAAGATGGAAAGCGAGGACTCCAACCCGCCCGATTCGAGTCAGGCGCACCCCGTCGAGCTAACCACCACACCTCAGGAACAGAGGATGGAGTACAACACAGACCACCTGAACCTTCCCACTCCTCATCACGATTCCTCCCTGGAAAACTCGTTCCCGCATTTGGCATCGATTTCGGCTTTATCTCTGACACCTCCTCATATGTTTTCGTTGGATTCTCAACTTGggCTTTTTCCCGGTATGGAGAATTGCCGGAATCCGCTCCTTGGCGACATGAACGAACCAAGACTTGAAAATCACATATCGAATAAGAAGAAAAtggGACGGCCTAAAGGTCAACATAGTGCTCCCAGGGGAGGTCCACCTCGATCTTGGACCAACGCCGAGCTCACTGAAGCTCTTCAACATGTATGGAATAAAAAGATGACCACTTCCCAAGCTTCCAGGATATTCGGAATCCCTTACAACAGCCTGCTGATGTACGTGCGCGGGAAATACGGCAAGTCCCTCAAGTTGGAGCAGCTGAAGAAGGAGTGTTTCGGGGAGCTCGGCTCGCCTCTCGACCTCCTCGGGCTGGGCAACATCTCGAACAACAACAACCCGAGCGGGAACAAACCGCCCAAAATGGAGCCGGAACATATGATGATACCTCCAGGGTTTAATCCGCCGTTTCCGCCTGTACCGACCAATTTCTACCCGGACTTCAGCACTGCTTACCCCGTGCCTGTAGGCATGGTTCACCTGCTGCCGCAGTCGGAGAAGAACCGCGAGCCGAGCAGCCAAGACGTCGTCGACTACACGAAGAGCGACTCAGAGTCCGAACGACACCGAGCGACTCCCCTCGACTACGCCAAAGACGACATGAGGAACAGCCCGATGGCCCTGGATTTCGTCAAAGAGGAGTCCAGCAGTCATCAGAACTGTTCGGATCTCATGGACGACGCGAGAGACGCGATGGGCAGCGGCGAGCGAAGCGATCAACGTGGTTCGCCCCGCGTACCGCTAGGATCGCAGTCGTCGAGCTGCCAACGTGAAATACCTGTAGGCCAATCTCACAACGGTCAAGATTGA
- Protein Sequence
- MSSPHYSLRWNNHQSHLLTAFDSLLQNETLVDVTLVCEESSFKAHKVVLSACSPYFQRIFSETPCKHPVIVLKDLRGWEVQAIVDFMYRGEISVGQEQLSSLIKAAESLQVRGLAHTERIPVLTSEKTPTHPRERCFSPTTPPHHQFNGPQGGAPHSMRLPQIPHLPNISFSEMPERHCTSPMPRRKQARPRRRSGDTSGPQDLTKTPNSPPRLSDMAENLSLKKSINNNNNSNNNNNNPPSRQNSTPTPPGMKMESEDSNPPDSSQAHPVELTTTPQEQRMEYNTDHLNLPTPHHDSSLENSFPHLASISALSLTPPHMFSLDSQLGLFPGMENCRNPLLGDMNEPRLENHISNKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLKKECFGELGSPLDLLGLGNISNNNNPSGNKPPKMEPEHMMIPPGFNPPFPPVPTNFYPDFSTAYPVPVGMVHLLPQSEKNREPSSQDVVDYTKSDSESERHRATPLDYAKDDMRNSPMALDFVKEESSSHQNCSDLMDDARDAMGSGERSDQRGSPRVPLGSQSSSCQREIPVGQSHNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00145736; iTF_00930488; iTF_00930232; iTF_01365634; iTF_00386212; iTF_01365320; iTF_00884330; iTF_00386513; iTF_00883700;
- 90% Identity
- iTF_00145736; iTF_00930488; iTF_00930232; iTF_01365634; iTF_00386212; iTF_01365320; iTF_00884330; iTF_00386513; iTF_00883700;
- 80% Identity
- iTF_00145736;