Basic Information

Insect: Stenodema calcarata
Gene Symbol: lov
Assembly: GCA_963920205.1
Location: OY986051.1:21631636-21652103[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.1e-17 6.6e-15 55.8 0.0 1 44 380 423 380 424 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.1e-17	6.6e-15	55.8	0.0	1	44	380	423	380	424	0.96

Sequence Information

Coding Sequence: ATGAGTTCCCCGCACTACAGCCTCCGCTGGAACAACCACCAGAGCCACCTCCTCACGGCCTTTGACTCGCTGCTCCAGAACGAGACTCTCGTCGACGTGACGCTCGTCTGCGAGGAGTCCAGCTTCAAGGCCCACAAGGTCGTCCTATCGGCCTGCAGCCCATACTTCCAACGGATTTTCTCTGAAACTCCGTGCAAGCACCCAGTGATAGTCCTGAAAGACCTGCGAGGATGGGAAGTTCAAGCCATCGTCGACTTCATGTACCGGGGAGAAATCAGCGTCGGACAAGAACAGCTCAGCTCCTTGATAAAAGCCGCTGAATCCTTGCAGGTCCGAGGATTGGCTCACACGGAACGAATCCCCGTGCTGCCCTCCGAGAAGGGCTCAGCTCACACTCGGGATCGGTGTTTCTCTCCTACGACTCCACCGCACAATCAGTTCAATGGGCCTCAGGGCGGTGGTCCACACTCGATGCGGCTCCCGCAAATCCCACATCTCCCCAACATCTCCTTCAGTGAAATGCCCGAGCGGCACTGCACTTCACCGATGCCTCGTCGGAAACAGGCGAGGCCCAGGAGGCGGTCGGGCGACACCAGCGGGCCCCAGGACCTGACAAAGACGCCCAACTCCCCGCCCAGATTATCTGACATGGCGGAAAACCTCTCACTCAAGAAAAAcatcaacaacaataacaacagcaacaacaacaataacaaccCGCCTTCTCGTCAGAACTCCACGCCGACGCCGCCAGGAGTcaatATGAAGATGGAAAGCGAGGACTCTAATCCACCAGACTCGAGTCAGACGCACCCCGTCGAACTGACCACAACGCCTCAGGAGCAGAGGATGGAATACAACACGGACCACCTGAATCTACCCACTCCTCATCACGATTCCTCATTGGAAAACTCATTCCCCCATCTGGCATCGATTTCGGCTCTTTCTCTGACTCCTCCTCACATGTTTTCGTTGGATTCGCAACTTGGGCTTTTTCCCGGTATGGAAAACTGCCGAAATCCGCTGCTTGGCGACATGAACGAACCAAGACTTGAAAACCACATATCTAACAAGAAGAAAATGGGACGACCAAAGGGACAACACAGTGCTCCGAGAGGTGGTCCTCCGAGATCTTGGACCAATGCTGAGCTTACAGAAGCTCTTCAACACGTGTGGAACAAGAAAATGACCACTTCTCAAGCATCCAGGATATTCGGAATCCCATACAACAGTCTACTTATGTACGTGCGCGGCAAATACGGGAAATCTCTCAAGCTCGAACAGCTGAAGAAAGAGTGTTTTGGCGAGCTTGGCTCGCCGCTCGATCTCCTCGGGTTGGGCAACAtttcgaataataataatccgaGTGGGAACAAACAGCCGAAAATGCCGGAGCCCGAACACATGATGATTCCTCCAGGGTTCAACCCGCCGTTCCCGCCCGTACCGACCAATTTCTACCCGGATTTCACCTCTGCGTACCCTGTTCCCGTCGGGATGGTTCACCTCCTGCCGCAGTCGGAGAAGAACCGCGAACCGAGCAGCCAGGACGTCGTCGACTACACAAAAAGCGACTCGGAGTCCGAACGACACCGCGCTACGCCCCTCGACTACGCCAAAGATGACATGAGGAACAGCCCGATGGCTTTGGATTTCGTCAAAGAGGAGTCTGCCGGCCATCAGAACTGTTCCGAACTCATGGACGATGCTCGTGATGCAATGGGAAGCGGCGAACGAAGCGATCAACGCGGTTCGCCTCGCGTACCCCTCGGATCCCAATCATCGAGCTGCCAACGAGAAATACCTGTCGGCCAAGCTCATAATGGCCAGGATTGA
Protein Sequence: MSSPHYSLRWNNHQSHLLTAFDSLLQNETLVDVTLVCEESSFKAHKVVLSACSPYFQRIFSETPCKHPVIVLKDLRGWEVQAIVDFMYRGEISVGQEQLSSLIKAAESLQVRGLAHTERIPVLPSEKGSAHTRDRCFSPTTPPHNQFNGPQGGGPHSMRLPQIPHLPNISFSEMPERHCTSPMPRRKQARPRRRSGDTSGPQDLTKTPNSPPRLSDMAENLSLKKNINNNNNSNNNNNNPPSRQNSTPTPPGVNMKMESEDSNPPDSSQTHPVELTTTPQEQRMEYNTDHLNLPTPHHDSSLENSFPHLASISALSLTPPHMFSLDSQLGLFPGMENCRNPLLGDMNEPRLENHISNKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLKKECFGELGSPLDLLGLGNISNNNNPSGNKQPKMPEPEHMMIPPGFNPPFPPVPTNFYPDFTSAYPVPVGMVHLLPQSEKNREPSSQDVVDYTKSDSESERHRATPLDYAKDDMRNSPMALDFVKEESAGHQNCSELMDDARDAMGSGERSDQRGSPRVPLGSQSSSCQREIPVGQAHNGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00145469;
90% Identity: iTF_00145469;
80% Identity: iTF_01365634;