Amei002785.1
Basic Information
- Insect
- Apis mellifera
- Gene Symbol
- TFIP11
- Assembly
- GCA_003254395.2
- Location
- NC:6843898-6854814[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-103 4.8e-100 333.8 16.5 1 275 534 801 534 801 0.99 2 2 0.002 9.6 4.8 0.1 244 272 815 843 806 846 0.88
Sequence Information
- Coding Sequence
- ATGATTGGATCAGATAAAATAGCGCATCTGACGCTGCTCGTAATATATACTACGTTCTTAGCGGAGATTCGAACCATTTCACTATTTCACAGTTACAAACTGCCGAATGACATTTTGAACAGAGACGAGGGAGACAATAGGCGATACGATTTTATCATAGTTGGTGCCGGATCCGGTGGATCCGTCTTGGCCAATCGGCTGTCCGAGAACAAGGAATGGAATATCCTGCTGCTAGAAGCTGGAAATACCGAGAATTTGTTCATGCAGGTCCCATCGTTCTCGGTGTTCATGCAATTATCGCGCTTTAATTGGGGCTACAAGGTGGAACCCCAGGAAAATGCCTGTTTAAGTATGATCAATCGGCAATGCGATTGGCCACGGGGGAAAGTCGTGGGTGGGACCAGCACGATCAATTATATGATCCATACCCGGGGAAATAAATTGGATTACGATCGTTGGGCCAAGATGGGGAACGAAGGTTGGTCTTATCGGGACGTGCTTCCTTATTTCAAGAAGAGCGAGAGATTCAACATTCCAGgtaTTTGGGCTGATGATAGcgatgaagaagaattatCTGCTAGACCATcatttaaaacttttgataaaggaccaaaaaattatacaactcCTGTAAATTTTGTAGCAGGAGGTATTCAACAAGCTGGAAAACCAAAAGAAGAAACAGATGATAAAGATGATGATGAAagtgataatgaaaatataaaatcacaaaAGGAATTTCCAAATAGTTCAAGttCTGATGATGAAAGACCAAATTCTATACATCAACGTGCATCATTCTCATTAAATACAGATGGAGATATTGCAGGTTTACGTAAAAAGAAGCATAAAGTAAATCCTTTATTAATGCAAAGTGGAATGGGTAGTTGGGAAGTTTATACAAAAGGTATTGGAGCTAAATTGTTGCTACagatGGGTTTTGAACCTGGAAAAGGATTAGGTAAACAACTACAAGGTATAAGTACACCAGTAGAAGCACATTTAAGAAAAGGCAGAGGTGCAATTGGTGCTTATGGACCAGAAAAAGGTCCAAAAGttccagaaaagaaaaaagaagatgaaatagatgaaggaaaagaatcgaaaactAAATTATCACAATGGAGAAAAGATGGAGGTACAgttaagaaaaaagtaaattatgtatatcgaAGTGTAGACCAAGTTTTGGaggatggaaaattgaaaccTAACAAAAAAGTAAGAATATCCAATGAAATGAGTAAAGTTAAAGTTATAGATATGACTGGACCAGAACAAAGAATTCTTAGTGGATATCACGCAATAGCTGGAGGTCAACAACGACCTGATGAAAATGTTGTTActgataaaaaatctaaagttAATTTTGCATTGCCTGAACTACAACATAACTTAAATATACTTGTGGACATGTGTGAACaagatattatacaaaatgataGAAGAACACGACATCTAAGTGATAGGGTAGTTGCATTAGaagcagaaaagaaaaatttgtctaAAGTTATAGATCAACATAGTCAGTTAATAGATACATTAGAAAATGTTCTTGCAATTGTAGACAGATTGATGGATGAAACCAATCAATTAACATTACAAGAAACTGCAGATGCTTTCAAAGATTtacaagataaatattatgaagaatataaaatgtatgaaCTTGGTGAATTAGCTAGTAGCTTTGTTGGTCCAAAAGTAAAAGATTGTTTAATTAGTTGGAATCCATTAATGCAACCAAAACAACcaattaaattgtttgaacAATGGAAAAGCATTTTAGAAAGCGGTACTACTACTCTTCAAACAAGAACTATGCATCCATATGATCATCTTGTTTGGAATTCATGGATGCCTTCAATTAGAGGAGCTATTCAacaaTGGACATGTAGGCAACCAGAACCactaatagaattaatagaacATTGGATGCCACTTCTTCCAAATtggatattagaaaatattttagatatgttAGTTCTTCCTAAACTTACCTTAGAAGTAGAAGAATGGAATCCTCTTACCGATACAGTACCTATTCATACATGGATTCATCCTTGGTTACCACTtttacgaAATCGTTTGGATACTTTAATATATCCAATAATACGACGTAAATTAGGATCTGCATTAGGTGGTTGGCATCCATCCGATAGATCCGCTAGGCTAATGTTACAACCATGGGCTAATGTCTTTGCAAAAGGAGATATGGAAGCTTTCTTggtgaaaaatatcattccaAAATTACAAATAGCACTTTcagaatttgttataaatccGCATCAACAACATTTAGACCAATGGAATTGGGTATATGAATGGAAAGAGTTAATTCCGTCTCATATAATGGCAggattattagataaattcttctttcctaAATGGTTACAAGTTTTGGCTCTTTGGTTAAATCATTCACCTAATTATGATCAAGTTACAAATTGGTATATGGGATGGAAAGGCATGTTgagtgaaaaaatattggcTGAACCGCTAGTAAAAGaacattttaaaaaagcaTTAGAATTGATGAATAGAGCAGTTTCTGTGCCACAAAGTCATCAACCGGGTGCGATGGAACAAGTTTCGTATTTAACGAGTTTAGAAAGGACGCAACCTACTATGTCACAGATGCCTCCAACTGCACAACCAAGAATGGAGagacTTGCAGAAGCAGTTAGAACAGCATCACAGATACCTCAAGGTTTTAAAGATCTTGTTCAAAAGAAATGCGAAGAAAgaggtattttatttatgccaATACCAAATCGGTATAGGGAagcaaaacaaatttataaagtgGGTAATGTTCAAGCTTACATAGACGGAAATGTTGTATTCGTTTGTCATAATGGTATGAATTGGATGCCGACACACTTAAATGCTTTATTAGATATGTCTGaactttag
- Protein Sequence
- MIGSDKIAHLTLLVIYTTFLAEIRTISLFHSYKLPNDILNRDEGDNRRYDFIIVGAGSGGSVLANRLSENKEWNILLLEAGNTENLFMQVPSFSVFMQLSRFNWGYKVEPQENACLSMINRQCDWPRGKVVGGTSTINYMIHTRGNKLDYDRWAKMGNEGWSYRDVLPYFKKSERFNIPGIWADDSDEEELSARPSFKTFDKGPKNYTTPVNFVAGGIQQAGKPKEETDDKDDDESDNENIKSQKEFPNSSSSDDERPNSIHQRASFSLNTDGDIAGLRKKKHKVNPLLMQSGMGSWEVYTKGIGAKLLLQMGFEPGKGLGKQLQGISTPVEAHLRKGRGAIGAYGPEKGPKVPEKKKEDEIDEGKESKTKLSQWRKDGGTVKKKVNYVYRSVDQVLEDGKLKPNKKVRISNEMSKVKVIDMTGPEQRILSGYHAIAGGQQRPDENVVTDKKSKVNFALPELQHNLNILVDMCEQDIIQNDRRTRHLSDRVVALEAEKKNLSKVIDQHSQLIDTLENVLAIVDRLMDETNQLTLQETADAFKDLQDKYYEEYKMYELGELASSFVGPKVKDCLISWNPLMQPKQPIKLFEQWKSILESGTTTLQTRTMHPYDHLVWNSWMPSIRGAIQQWTCRQPEPLIELIEHWMPLLPNWILENILDMLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWANVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVYEWKELIPSHIMAGLLDKFFFPKWLQVLALWLNHSPNYDQVTNWYMGWKGMLSEKILAEPLVKEHFKKALELMNRAVSVPQSHQPGAMEQVSYLTSLERTQPTMSQMPPTAQPRMERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQIYKVGNVQAYIDGNVVFVCHNGMNWMPTHLNALLDMSEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00898736;
- 90% Identity
- iTF_00118005;
- 80% Identity
- -