Amei001357.1
Basic Information
- Insect
- Apis mellifera
- Gene Symbol
- bab1
- Assembly
- GCA_003254395.2
- Location
- NC:783783-791269[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8 3.8e+03 -3.2 0.0 14 22 225 233 219 233 0.67 2 2 2e-07 0.00027 19.7 0.1 1 39 292 330 292 344 0.92
Sequence Information
- Coding Sequence
- ATGGAAAGTGGAAGCAACCTGCCTACGCCGGGTAATTATCCTGGTGGGGATCGTCAACAGTTTTGCGTTTCATGGAACTCTCATCAATCAAATATGCACAGTGCATTTCCAAAACTTTTAAGTTCTGAACAATTTGTTGATGTCACTTTAGCCTGTGATGGAGGCTCAATAAAGTGTCACAAAGTGGTATTATCCGCTTGTAGTGATTATTTGGAACGTTTACTGTTAGAAATACCTTGCACTCatcctattatatttttgagagaTATGAGAATGTGGGAACTTCAAGCATTAGTGGAGTTTATGTATCGTGGTGAAGTATATGTGGAACAACAACAACTTGGTAAATTAATGCAAGCTGCTGAAGTTTTGCagGTTCGTGGTTTATTTACTCAAGGATCAAGTGATAATTCTTCGAGTGAAAGTGGTTCACAACAATGCGATTCTAATGCTACTGTTGCACCTACGATCGCACAACAGGATGGATCTGACTATAAATCTGAGGAAACTCCATCTGAGGATGGAACTTCGAATACTAATTTTCTAGAGAATACATCGATTGCTGCATCTAGTACAGCAAATGCTCCATCACACAGTACTACACCAATTCCACAGAATTctaattcatcaaattttatgaatatggaACACAGTGAGGCATTACAACATTTGGAAAAGGCACTTAGCGTTTGCGAAGCAACTTTAACCGAGACTCAGGGCATGGTTAGAATGGAACCAGACGAGCAGTTTACCCAACAGCAAGATGTCAAGCCGTACTCCATTAGTATGGTACCAAGCAGCAATTGTAATCCTAGTAGCCCATTTCCTGCGATTGAAGGTAAGGAGGAaggTTATCAAAGACGACAAAGACGTtcggaagaggaattgaagCAAGCTTCGGATATGGTAGCACGTGGTATGACGTTTCAAGTTGCTTCAGAAAAGTACAAAATTCCGATAAGTACGATTCGATTCTATATGGTTAGGAAAGGTATATTGCAAAGGCGAAAACGCGGTCGTGGTTCGAGTAATCTTGGCATGAATAGTCAACCGGGAAGTCCTGCAAGTCCGCCATATCATATGATGAACTATCGTTTGCCAGAAAGCCTAAACTCCAGCCTACCGTAG
- Protein Sequence
- MESGSNLPTPGNYPGGDRQQFCVSWNSHQSNMHSAFPKLLSSEQFVDVTLACDGGSIKCHKVVLSACSDYLERLLLEIPCTHPIIFLRDMRMWELQALVEFMYRGEVYVEQQQLGKLMQAAEVLQVRGLFTQGSSDNSSSESGSQQCDSNATVAPTIAQQDGSDYKSEETPSEDGTSNTNFLENTSIAASSTANAPSHSTTPIPQNSNSSNFMNMEHSEALQHLEKALSVCEATLTETQGMVRMEPDEQFTQQQDVKPYSISMVPSSNCNPSSPFPAIEGKEEGYQRRQRRSEEELKQASDMVARGMTFQVASEKYKIPISTIRFYMVRKGILQRRKRGRGSSNLGMNSQPGSPASPPYHMMNYRLPESLNSSLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228300;
- 90% Identity
- iTF_00966113;
- 80% Identity
- iTF_00142558;