Alab026012.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Apis laboriosa
Gene Symbol
TFIP11
Assembly
GCA_014066325.1
Location
JACEOM010004366.1:1471806-1475162[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.5e-104 1.4e-99 334.2 16.5 1 275 391 658 391 658 0.99
2 2 0.0017 32 5.0 0.1 244 272 672 700 663 703 0.88

Sequence Information

Coding Sequence
ATGTCAGAAGACGAAGTGGAAAGTTTTGAAATCACAGATTACGATcttgaaaatgaattcaatattaatcgcCCTAGGCGTAAATTGtcaaaaaaacaacaaatgcttggtaTTTGGGCTGATGATAGCGATGAAGAAGAATTATCTGCTAGACCatcatttaaaacttttgataAAGGACCAAAGAATTATACAACTCCTGTAAATTTTGTAGCAGGAGGTATTCAACAAGCTGGGAAGCCAAAAGAAGAAACAGATGATAAAGATGATGATGAAagtgataatgaaaatataaaatcacaaaAGGAATTTCCAAATAGTTCAAGttCTGATGATGAAAGACCCAATTCTATACATCAACGTGCATCATTCTCATTAAATACAGATGGAGATATTGCAGGTTTACGTAAAAAGAAGCATAAAGTAAATCCTTTATTAATGCAAAGTGGAATGGGTAGTTGGGAAGTTTATACAAAAGGTATTGGAGCTAAATTGTTGCTACagATGGGTTTTGAACCTGGAAAAGGATTAGGTAAACAATTACAAGGTATAAGTACACCAGTAGAAGCACATTTAAGAAAAGGCAGAGGTGCAATTGGTGCTTATGGACCAGAAAAAGGTCCAAAAGttccagaaaagaaaaaagaagatgaaatagATGAaggaaaagaatcaaaaactAAATTATCACAATGGAGAAAAGATGGAGGTACtgttaagaaaaaagtaaattatgtatatcgaAGCGTAGACCAAGTTTTGGaggatggaaaattgaaaccTAACAAAAAAGTAAGAATATCCAATGAAATGAGTAAAGTTAAAGTTATAGATATGACTGGACCAGAACAAAGAATTCTTAGTGGATATCACGCGATAGCTGGAGGTCAACAACGACCTGATGAAAATGTTGTTActgataaaaaatctaaagttAATTTTGCATTGCCTGAACtacaacataatttaaatatacttgtGGACATGTGTGAACaagatattatacaaaatgataGAAGAACACGACATCTGAGTGATAGGGTTGTTGCACTAGaagcagaaaagaaaaatttgtctaAAGTTATAGATCAACATAGTCAGTTAATAGATACATTAGAAAATGTTCTTGCAATTGTAGACAGATTGATGGATGAAACCAATCAATTAACATTACAAGAAACTGCAGATGCTTTCAAAGATttacaagataaatattatgaagaatataaaatgtatgaaCTTGGTGAATTAGCTAGTAGTTTTGTTGGTCCAAAAGTAAAAGATTGTTTAATTAGTTGGAATCCATTAATGCAACCAAAACAACCAATTAAATTGTTTGAGCAATGGAAAAGCATTTTAGAAAGTGGTACTACTACTCTTCAAACAAGAACTATGCATCCATATGATCATCTTGTTTGGAATTCATGGATGCCTTCAATTAGAGGAGCTATTCAacaaTGGACATGTAGGCAACCAGAACCactaatagaattaatagaacATTGGATGCCACTTCTTCCAAATtggatattagaaaatattttagatatgttAGTTCTTCCTAAACTTACCTTAGAAGTAGAAGAATGGAATCCTCTTACTGATACAGTACCTATTCACACATGGATTCATCCTTGGTTACCACTTTtacgaaACCGTTTGGATACTTTAATATATCCAATAATACGACGTAAATTAGGATCTGCGTTAGGTGGTTGGCATCCGTCCGATAGATCTGCTAGGCTAATGTTACAACCATGGGCTAATGTCTTTGCAAAAGGAGATATGGAAGCTTTCTTggtgaaaaatatcattccaAAATTACAAATAGCACTTTcggaatttgttataaatccACATCAACAACATTTAGACCAATGGAATTGGGTATATGAATGGAAAGAGTTAATTCCGTCTCATATAATGGCAGGATTGTtagataaattcttctttcctaAATGGTTACAAGTTTTGGCTCTTTGGTTAAATCATTCACCTAATTATGATCAAGTTACAAATTGGTATATGGGATGGAAAGGCATGTtgagtgaaaaaatattggctGAACCGCTAGTAAAAGaacattttaaaaaagcaTTAGAATTGATGAATAGAGCAGTTTCTGTGCCACAAAGTCATCAACCGGGTGCGATGGAACAAGTTTCGTATTTAACGAGTTTAGAAAGGACGCAACCTACTATGTCACAAATGCCTCCAACTGCACAACCAAGAATGGAGagacTTGCAGAAGCAGTTAGAACAGCATCACAAATACCTCAAGGTTTTAAAGATCTTGTTCAAAAGAAATGCGAAGAAAgaggtattttatttatgccaATACCGAATCGGTATAGAGAagcaaaacaaatttataaagtgGGTAATGTTCAAGCTTACATAGACGGAAACGTTGTATTCGTTTGTCATAATGGCATGAATTGGATGCCAACGCACTTAAATGCTTTATTAGATATGTCTGaactttag
Protein Sequence
MSEDEVESFEITDYDLENEFNINRPRRKLSKKQQMLGIWADDSDEEELSARPSFKTFDKGPKNYTTPVNFVAGGIQQAGKPKEETDDKDDDESDNENIKSQKEFPNSSSSDDERPNSIHQRASFSLNTDGDIAGLRKKKHKVNPLLMQSGMGSWEVYTKGIGAKLLLQMGFEPGKGLGKQLQGISTPVEAHLRKGRGAIGAYGPEKGPKVPEKKKEDEIDEGKESKTKLSQWRKDGGTVKKKVNYVYRSVDQVLEDGKLKPNKKVRISNEMSKVKVIDMTGPEQRILSGYHAIAGGQQRPDENVVTDKKSKVNFALPELQHNLNILVDMCEQDIIQNDRRTRHLSDRVVALEAEKKNLSKVIDQHSQLIDTLENVLAIVDRLMDETNQLTLQETADAFKDLQDKYYEEYKMYELGELASSFVGPKVKDCLISWNPLMQPKQPIKLFEQWKSILESGTTTLQTRTMHPYDHLVWNSWMPSIRGAIQQWTCRQPEPLIELIEHWMPLLPNWILENILDMLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWANVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVYEWKELIPSHIMAGLLDKFFFPKWLQVLALWLNHSPNYDQVTNWYMGWKGMLSEKILAEPLVKEHFKKALELMNRAVSVPQSHQPGAMEQVSYLTSLERTQPTMSQMPPTAQPRMERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYREAKQIYKVGNVQAYIDGNVVFVCHNGMNWMPTHLNALLDMSEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00898736;
90% Identity
iTF_00118005;
80% Identity
iTF_00141222;