Basic Information

Insect: Apis dorsata
Gene Symbol: ZNF236_1
Assembly: GCA_000469605.1
Location: NW:66505-75389[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00056 0.034 13.7 3.0 2 23 178 199 177 199 0.96

2 26 1.8e-05 0.0011 18.4 1.0 1 23 205 227 205 227 0.98

3 26 2.3e-06 0.00014 21.3 0.4 2 23 233 254 233 254 0.97

4 26 0.006 0.36 10.5 0.3 3 23 262 282 260 282 0.96

5 26 4.9e-05 0.003 17.1 0.9 2 23 293 314 293 314 0.98

6 26 5.4e-07 3.3e-05 23.2 1.1 1 23 335 357 335 357 0.99

7 26 4.2e-06 0.00026 20.4 0.7 1 20 363 382 363 385 0.95

8 26 2e-05 0.0012 18.3 0.7 1 23 391 414 391 414 0.95

9 26 0.00014 0.0085 15.6 4.1 1 23 423 446 423 446 0.98

10 26 1.4e-06 8.2e-05 22.0 2.1 1 23 575 597 575 597 0.98

11 26 8.4e-05 0.0051 16.3 1.7 1 23 603 625 603 625 0.99

12 26 1.1e-05 0.00064 19.2 0.9 1 23 631 653 631 653 0.98

13 26 0.002 0.12 12.0 6.7 1 23 737 759 737 759 0.98

14 26 0.0015 0.09 12.4 4.1 1 23 765 787 765 787 0.98

15 26 1.6e-05 0.00097 18.6 0.8 3 23 795 815 793 815 0.97

16 26 0.00029 0.018 14.6 7.6 1 23 821 843 821 843 0.98

17 26 0.74 44 3.9 1.3 2 23 1235 1256 1234 1256 0.94

18 26 0.00052 0.031 13.8 1.3 1 23 1262 1284 1262 1284 0.98

19 26 0.00032 0.02 14.5 1.9 1 23 1290 1312 1290 1312 0.98

20 26 1.1e-07 6.4e-06 25.4 2.1 2 23 1389 1410 1388 1410 0.98

21 26 0.0002 0.012 15.1 4.1 1 23 1416 1438 1416 1438 0.99

22 26 6.8e-05 0.0041 16.6 1.9 1 23 1444 1466 1444 1466 0.98

23 26 0.00021 0.012 15.1 2.6 1 23 1472 1494 1472 1494 0.98

24 26 2e-06 0.00012 21.4 0.6 2 23 1710 1731 1709 1731 0.97

25 26 9.7e-06 0.00059 19.3 4.5 1 23 1737 1759 1737 1759 0.98

26 26 2e-06 0.00012 21.5 1.1 1 23 1765 1788 1765 1788 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00056	0.034	13.7	3.0	2	23	178	199	177	199	0.96
2	26	1.8e-05	0.0011	18.4	1.0	1	23	205	227	205	227	0.98
3	26	2.3e-06	0.00014	21.3	0.4	2	23	233	254	233	254	0.97
4	26	0.006	0.36	10.5	0.3	3	23	262	282	260	282	0.96
5	26	4.9e-05	0.003	17.1	0.9	2	23	293	314	293	314	0.98
6	26	5.4e-07	3.3e-05	23.2	1.1	1	23	335	357	335	357	0.99
7	26	4.2e-06	0.00026	20.4	0.7	1	20	363	382	363	385	0.95
8	26	2e-05	0.0012	18.3	0.7	1	23	391	414	391	414	0.95
9	26	0.00014	0.0085	15.6	4.1	1	23	423	446	423	446	0.98
10	26	1.4e-06	8.2e-05	22.0	2.1	1	23	575	597	575	597	0.98
11	26	8.4e-05	0.0051	16.3	1.7	1	23	603	625	603	625	0.99
12	26	1.1e-05	0.00064	19.2	0.9	1	23	631	653	631	653	0.98
13	26	0.002	0.12	12.0	6.7	1	23	737	759	737	759	0.98
14	26	0.0015	0.09	12.4	4.1	1	23	765	787	765	787	0.98
15	26	1.6e-05	0.00097	18.6	0.8	3	23	795	815	793	815	0.97
16	26	0.00029	0.018	14.6	7.6	1	23	821	843	821	843	0.98
17	26	0.74	44	3.9	1.3	2	23	1235	1256	1234	1256	0.94
18	26	0.00052	0.031	13.8	1.3	1	23	1262	1284	1262	1284	0.98
19	26	0.00032	0.02	14.5	1.9	1	23	1290	1312	1290	1312	0.98
20	26	1.1e-07	6.4e-06	25.4	2.1	2	23	1389	1410	1388	1410	0.98
21	26	0.0002	0.012	15.1	4.1	1	23	1416	1438	1416	1438	0.99
22	26	6.8e-05	0.0041	16.6	1.9	1	23	1444	1466	1444	1466	0.98
23	26	0.00021	0.012	15.1	2.6	1	23	1472	1494	1472	1494	0.98
24	26	2e-06	0.00012	21.4	0.6	2	23	1710	1731	1709	1731	0.97
25	26	9.7e-06	0.00059	19.3	4.5	1	23	1737	1759	1737	1759	0.98
26	26	2e-06	0.00012	21.5	1.1	1	23	1765	1788	1765	1788	0.97

Sequence Information

Coding Sequence: atgatacaaaaaatgTTAACGCGACACAATATAGTTACAGAAACTCCACATATGGAAACAATACCTATAAATCTTGTTGCTACCGAAGATGGTAGAACACTTTTGGCAGTAACTGAACATAAAGATGGTATGTTGGAAATTGTTGCAACTCCAGTTATGCTTGTTGGACAAAATGAAACAACTTCATCATTGGTCGatgtaaaaaatctaaatggaaatttaatattgcattcgCctgtttttcaaataaatgttgaaaatattgtcAATGACTCAGAATTTCAGCAGGTATCGCAAAATTTTGAGGGCAATTCTGATAATATTGatcgaatgaaattacaattatataaagaagtaaaagacaaaaaagtaatttctcAGGAATATCAGTCTCTTTCTATGGATGATTCATTAGCTgataaaaaagaggaaaagatttGTAAACAAAATACAGCAAATGTAActgtaaaaaaacataatcttGGAAGgcctaagaaaaataaaataaatttagaaaatTCGGAAAGTTTAACATGCGAAATTTGTcatcaaaaatttgttaaacaaaCATTATATCGAAAACATATGGAAAATCATGCAGAAGAGAAACCACATCGGTGTCCAAAATGTTCTGCATCATTCAATGTAccgtcaaattttactttacacATGGCAACGCATAATACAGGTGAACCAAAATGTCCAGaatgtggaaaaaaatttgcaagaatGGCCAGCTTGAAATCTCATATGTTGTtacatgaaaaagaagaaaatttattctgtaCAGAATGTGAAGATGCCTTCTCGACAAAAactCAATTGGATGCACATTTAAAACTTCATGGGGAAAAATGGGCAATGGAGGAAATgcgaaaatgtaaattatgtaataaacaatttagtCAACCAGCTTTGTACAGGCTTCATATTCGTGAACATTATAGgTTGCAGACAAAAGTAGTGAAACAGACAAAAAAGGGAACAAAACACAAAACGATGTATAAGTGTACCATATGtttgaaatcttttcaaaaaccAAGTCAATTAATGCGGCATATTAGAGTGCATACTGGTGAAAAACcctttaaaTGTACAGTATGTGGTCGTGCATTCACGCAAAAAAGTTCATTGCAAATTCATACATGGCAACATAATGGTATTCGACCTCATGCTTGTGAATTTTGTAATGCCAAATTTAGTCAAAAagGTAATTTAAATGCTCATATAATGAGAGTTCATAATATCCCAGAAGGAGAacctatatataaatgtaattattgttCATGTGTATTTAAAAAGGTTGGTAGTTTAAATAGTCACATGAAACGTATGCACACCGACATAAATgagggAAATATGAACGATGCTGTTAACGATGATACTTTCCCAACTGATACCATGGAGTCTGATATACGTGCAACCGTGGATAACGTTATTACACAATTAGCATCTTTGGAATCTGAAACGCATCAAACTACGGAATCATCAAATTTCCAATCTTGTTTATTATCAGAAAATGTGTCGAAGAAAGATATACTGCAACaagcattaaaaaatagtgGTCTATccagtaaaaataaaattatttccgaaaGTGTATCAGaagcaaaaaaatttggaGCTCGTGTTAATTTTGTCACATTATTGGATCGAGCACCTGACGGTGATACGAGaaaatatttgacaataaAACAACGATGCGTAGGAAATGTAAGATGGTACGCGTGTACTTTTTGTCACAAAGAATTCAAGAAACCATCAGATCTGATTCGTCATTTGCGTGTTCATACACAAGAAAAACCTTTTaagTGTACCTATTGTTATCGTTCGTTCGCTTTGAAATCTACTATGATAGCACACGAACGCACACATTCAAGTGTCAAAAGATACGTTTGTAATTCTTGCGACAAAACATTCGTCTCTCATGGTAGTTTAATTGCTCATACTAGattacaCGCAAAATCTGATAATAACAAGGATTCCAATATGCATATCACAATTGATACTGATATTCATTCTACTAATCaatcgaaaattcaaataaaaaataaatcaaaattatcacaaGAAGCAGAAACTCTAGTACCTCAAGTAATTTTACAAGAACCGTTGCTAATTAATGATGTGGGAAACAAAATTTGTGTAGCACAAATATcttcaaaagaaaaacgtgCTTATGACGGAACTATCGATCAAACCAGACCGCACAAGTGTTGGATTTGTCAGGCAGCATTCAGAAAGATTAGTCATTTAAAGCAGCATCATCGTCGTCATACGGGAGAACGTCCgtataaatgcataaaatgcgatagGAGATTTACATCAAATAGCGTTTTAAAATCGCATTTACATACTCATGAGGATTCGAGACCATATGGTTGTTCAATTTGtaatgcaaaattttcaacacAAAGCAGCATGAAAAGACACATGGTTACACACAGTAATAAAAGACCATTCATGTGTCCATATTGTCacaaaacttttaaaacttaTGTCAATTGTCGGAAACACATGAAAATACATAAACATGAATTGGTACAACGGCAACTGGAACAACAGAAAATCAGAATTCAAGAACAGTCTTcagataaattgaatttaaaggaaaattctAAACAGGAAGCGGCTCTTGAATCGTCTTGTTCCTCTTCTGTCTCTATCACAACTATTAATTCCACCATTACCACCAATATTGCTACCACTACTACTACTCCCGCTATCGTCACAACATCCTCTTCTACATTTTCAGATAATCTTGTACTTTCTCGACTTGGATCAGttgaattatcatttcaatCACAACTTGGGTCAGAGTTTTCACAAACTTTTCCCGAGTTTCAAAACATaagtgaagaaaaagaaaaaataagagccGTTTTACCAACAAATTGCGATGCTACAACATTTATTAATCagaACATATCGGGAATAGCTGTAACGAGTCTTGAAAATTCACAGATATTACACGCCGATGAAGCTGGTTCAGTTACATTGCCGATTTATTCCGGAGATCAGACACTTACACcaGAAAGCATACGGGAAATAGAAGAAACATtgaatcaacaattttttaatatagggATGAATCTTAATTTAGGGAGTAATCAGACGAGACATtcgaataatacaaatacGAATGATTTCGATCATATGAAAGAACAACAGCCTGTAATGaatgtaatatatgaaaataataatagcgataatagtaatagtaatgtAGAAACATCTAGAGAACATGTTTTTTCGTCACAATTAGATTCATTTGAGATGGATCATATTGCTTTGCaatcGGACGCTGAAATCGACATCGGTTTAGATACAAGAAATTCAACTAATATGGCGAGTATATTGcctagaaatatgaaaaatgaacatGAACTTTCTGTTTGTGTTACGACATCAGATAATACAAACGTTGAACAAACAGAGAGATCTGGTATGCAAGCAGTGGTATTTGTTTCTCAGCAAAATTTTCCTAGAAAAGAGGGGGTAGAAGATAAATTTGCAATAGAAGAAACTCACAAGAGTAATATCATTCATAAGCAATGTACAATCAACCCGATATTCTTTACAGAAGAATTTCGAGAAACATCGCAAAATTTCAAGACTCAGCCAAATACGCGTAGTTTGTCATCCGATGTTGCAGAAATTAAAGTCGCTACGAGTAAAATATCTCGTGGGCAATCTTTATTACAATGTCATATGTGTAACCAACAAGGATTCACAACAATTgcattaaaaGAACATTTGACAAGCCATCGTGGAACAAAAGAATATCAATGTACGGAatgttcttcaaaattttacacAAATGCTGGATTAAATAGACACTCgaagattcattttattaaacaattatataaatgttcgtcgtgtaacaaatattttaatgataaaatcgaACTGCAATCGCATTCTAAAATTCATGAGATTCCAATATGGAATGCATCAGAAATAAATAGCACGACAGAAAATTCAACGCTTTCATCGGAAATGCAACCAGTTGTAAATGGTCATTCATCTTTGAATATCATAATAGATACAGATTCTGCAGTTTCGGAAAAAGTTCTGTTAGATACGGTAGCAGAGAAAGAAGTAATGGATCGAGTGGAAAATATCTTGGTCGAGGAAAAGGAACGGAAggaatatacgaataaatgtaaatattgtcCGAAAACATTTCGCAAGCCAAGTGATCTCATAAGACATACACGTACACACACAGGAGAACGACCGTACAAGTGCAATTACTGTAATAAAAGTTTCGCTGTAAAATGTACTTTGGATTCACATACGAAAGTTCATActggaaaaaaaacatttcgttGTCACGTATGCAACAGCTTATTTGCGACTAAAGGTAGTTTGAAAGTTCATATGCGTTTACATACAGgttcAAAACCATTTAAATGCCCTATTTGTGATTCGAGATTTCGAACTTCCGGTCATAGAAAAGTGCATTTATTGAAACATGCACGCGAATACAAAGATAAtccgaaaagaaaacaaaaacatttaaaagttACGGCTATAGCCGAAGTGGCAGCTAATCTTGAAAAATGTGACAGAAAAGAGAAGGAGGTAAACAACTTTGATACAAAGCAACAACTATCACAGGAACAGCTTTCGCAAACAGGATTAATTTCCCATTTGGATGCATATAGTATTGAAACAGCTGCTTCCTGTTTATCCGATCAAATTAACTTCGACACGGAAGGTGTCGCGTCAAACAACAATCAAACAATTGTATcgataaatgaaaacaatCATTTAGTTactaatttacattttcttttaacaaatgGTCTTGTTACCATTCAAACCGAAGAATCGTTACTTCCACAATCGTCAAATGACAATTTGCATCATCGACCGACTATAATTTCCGATGCTGAGTGTACATTGACAACATCTAGTCTAGCATCCGAtactaataatgaaaatactaataagaatgaaaatcaTATAGAATTAATGTTAAAGACACCATCGAGTAATTGTCTTTTAACGGTACCAACGCTGACACCGCAGttagaatcattttcaaagaTGCCTGCGCAAAAGGCGTTGCCAACAGTATCGGATAAAGTAGCAATTAAAGGGAATTCATCCAAGAAAGAATGTGACATTTGTGGGAAAACATTTACAAAACCTTATCAAGTGGAAAGACATAAACGAATTCATACCGGTGAAAGGCCATACAAGTGTGATTTATGTACAAAATCATTTGCTCAAAAATCAACTTTACAGATGCATCAGAAACATCATACTGGTGATCGTCCATATGCTTGCTCGTATTGTGAATATTCCTTTACGCAAAAAGGCAATCTTCGAACACATGTGAAACGTGTTCATCAATTGGATACTGTCGACACGAAGAAATGGAATCGCGTGCGTCAATCTTTCTTACCCAAAACGTATAATCAAGAAAACACAATCGAAACTAAGAATCTAAATCTAGATAATATATCGTTTGTTGAACTTCTTAAGGAATGA
Protein Sequence: MIQKMLTRHNIVTETPHMETIPINLVATEDGRTLLAVTEHKDGMLEIVATPVMLVGQNETTSSLVDVKNLNGNLILHSPVFQINVENIVNDSEFQQVSQNFEGNSDNIDRMKLQLYKEVKDKKVISQEYQSLSMDDSLADKKEEKICKQNTANVTVKKHNLGRPKKNKINLENSESLTCEICHQKFVKQTLYRKHMENHAEEKPHRCPKCSASFNVPSNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWAMEEMRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKKGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNIPEGEPIYKCNYCSCVFKKVGSLNSHMKRMHTDINEGNMNDAVNDDTFPTDTMESDIRATVDNVITQLASLESETHQTTESSNFQSCLLSENVSKKDILQQALKNSGLSSKNKIISESVSEAKKFGARVNFVTLLDRAPDGDTRKYLTIKQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTYCYRSFALKSTMIAHERTHSSVKRYVCNSCDKTFVSHGSLIAHTRLHAKSDNNKDSNMHITIDTDIHSTNQSKIQIKNKSKLSQEAETLVPQVILQEPLLINDVGNKICVAQISSKEKRAYDGTIDQTRPHKCWICQAAFRKISHLKQHHRRHTGERPYKCIKCDRRFTSNSVLKSHLHTHEDSRPYGCSICNAKFSTQSSMKRHMVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELVQRQLEQQKIRIQEQSSDKLNLKENSKQEAALESSCSSSVSITTINSTITTNIATTTTTPAIVTTSSSTFSDNLVLSRLGSVELSFQSQLGSEFSQTFPEFQNISEEKEKIRAVLPTNCDATTFINQNISGIAVTSLENSQILHADEAGSVTLPIYSGDQTLTPESIREIEETLNQQFFNIGMNLNLGSNQTRHSNNTNTNDFDHMKEQQPVMNVIYENNNSDNSNSNVETSREHVFSSQLDSFEMDHIALQSDAEIDIGLDTRNSTNMASILPRNMKNEHELSVCVTTSDNTNVEQTERSGMQAVVFVSQQNFPRKEGVEDKFAIEETHKSNIIHKQCTINPIFFTEEFRETSQNFKTQPNTRSLSSDVAEIKVATSKISRGQSLLQCHMCNQQGFTTIALKEHLTSHRGTKEYQCTECSSKFYTNAGLNRHSKIHFIKQLYKCSSCNKYFNDKIELQSHSKIHEIPIWNASEINSTTENSTLSSEMQPVVNGHSSLNIIIDTDSAVSEKVLLDTVAEKEVMDRVENILVEEKERKEYTNKCKYCPKTFRKPSDLIRHTRTHTGERPYKCNYCNKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFKCPICDSRFRTSGHRKVHLLKHAREYKDNPKRKQKHLKVTAIAEVAANLEKCDRKEKEVNNFDTKQQLSQEQLSQTGLISHLDAYSIETAASCLSDQINFDTEGVASNNNQTIVSINENNHLVTNLHFLLTNGLVTIQTEESLLPQSSNDNLHHRPTIISDAECTLTTSSLASDTNNENTNKNENHIELMLKTPSSNCLLTVPTLTPQLESFSKMPAQKALPTVSDKVAIKGNSSKKECDICGKTFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACSYCEYSFTQKGNLRTHVKRVHQLDTVDTKKWNRVRQSFLPKTYNQENTIETKNLNLDNISFVELLKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_00141956; iTF_00140726;
80% Identity: -