Basic Information

Insect: Apis cerana
Gene Symbol: ZNF236
Assembly: GCA_029169275.1
Location: CM054911.1:15749635-15757716[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00089 0.1 13.7 3.0 2 23 178 199 177 199 0.96

2 26 2.9e-05 0.0033 18.4 1.0 1 23 205 227 205 227 0.98

3 26 3.6e-06 0.0004 21.3 0.4 2 23 233 254 233 254 0.97

4 26 0.0094 1.1 10.5 0.3 3 23 262 282 260 282 0.96

5 26 7.7e-05 0.0087 17.1 0.9 2 23 293 314 293 314 0.98

6 26 8.5e-07 9.6e-05 23.2 1.1 1 23 335 357 335 357 0.99

7 26 6.7e-06 0.00075 20.4 0.7 1 20 363 382 363 385 0.95

8 26 3.2e-05 0.0036 18.3 0.7 1 23 391 414 391 414 0.95

9 26 0.00022 0.025 15.6 4.1 1 23 423 446 423 446 0.98

10 26 2.1e-06 0.00024 22.0 2.1 1 23 574 596 574 596 0.98

11 26 0.00013 0.015 16.3 1.7 1 23 602 624 602 624 0.99

12 26 1.7e-05 0.0019 19.2 0.9 1 23 630 652 630 652 0.98

13 26 0.0031 0.35 12.0 6.7 1 23 737 759 737 759 0.98

14 26 3.9e-05 0.0044 18.0 5.1 1 23 765 787 765 787 0.99

15 26 4.5e-05 0.005 17.8 0.8 3 23 795 815 793 815 0.97

16 26 0.00046 0.052 14.6 7.6 1 23 821 843 821 843 0.98

17 26 1.2 1.3e+02 3.9 1.3 2 23 1234 1255 1233 1255 0.94

18 26 0.00081 0.092 13.8 1.3 1 23 1261 1283 1261 1283 0.98

19 26 0.00027 0.03 15.4 1.5 1 23 1289 1311 1289 1311 0.98

20 26 1.7e-07 1.9e-05 25.4 2.1 2 23 1388 1409 1387 1409 0.98

21 26 0.00031 0.035 15.2 4.1 1 23 1415 1437 1415 1437 0.99

22 26 0.00011 0.012 16.6 1.9 1 23 1443 1465 1443 1465 0.98

23 26 0.00033 0.037 15.1 2.6 1 23 1471 1493 1471 1493 0.98

24 26 3.1e-06 0.00036 21.4 0.6 2 23 1709 1730 1708 1730 0.97

25 26 1.5e-05 0.0017 19.3 4.5 1 23 1736 1758 1736 1758 0.98

26 26 3.1e-06 0.00035 21.5 1.1 1 23 1764 1787 1764 1787 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00089	0.1	13.7	3.0	2	23	178	199	177	199	0.96
2	26	2.9e-05	0.0033	18.4	1.0	1	23	205	227	205	227	0.98
3	26	3.6e-06	0.0004	21.3	0.4	2	23	233	254	233	254	0.97
4	26	0.0094	1.1	10.5	0.3	3	23	262	282	260	282	0.96
5	26	7.7e-05	0.0087	17.1	0.9	2	23	293	314	293	314	0.98
6	26	8.5e-07	9.6e-05	23.2	1.1	1	23	335	357	335	357	0.99
7	26	6.7e-06	0.00075	20.4	0.7	1	20	363	382	363	385	0.95
8	26	3.2e-05	0.0036	18.3	0.7	1	23	391	414	391	414	0.95
9	26	0.00022	0.025	15.6	4.1	1	23	423	446	423	446	0.98
10	26	2.1e-06	0.00024	22.0	2.1	1	23	574	596	574	596	0.98
11	26	0.00013	0.015	16.3	1.7	1	23	602	624	602	624	0.99
12	26	1.7e-05	0.0019	19.2	0.9	1	23	630	652	630	652	0.98
13	26	0.0031	0.35	12.0	6.7	1	23	737	759	737	759	0.98
14	26	3.9e-05	0.0044	18.0	5.1	1	23	765	787	765	787	0.99
15	26	4.5e-05	0.005	17.8	0.8	3	23	795	815	793	815	0.97
16	26	0.00046	0.052	14.6	7.6	1	23	821	843	821	843	0.98
17	26	1.2	1.3e+02	3.9	1.3	2	23	1234	1255	1233	1255	0.94
18	26	0.00081	0.092	13.8	1.3	1	23	1261	1283	1261	1283	0.98
19	26	0.00027	0.03	15.4	1.5	1	23	1289	1311	1289	1311	0.98
20	26	1.7e-07	1.9e-05	25.4	2.1	2	23	1388	1409	1387	1409	0.98
21	26	0.00031	0.035	15.2	4.1	1	23	1415	1437	1415	1437	0.99
22	26	0.00011	0.012	16.6	1.9	1	23	1443	1465	1443	1465	0.98
23	26	0.00033	0.037	15.1	2.6	1	23	1471	1493	1471	1493	0.98
24	26	3.1e-06	0.00036	21.4	0.6	2	23	1709	1730	1708	1730	0.97
25	26	1.5e-05	0.0017	19.3	4.5	1	23	1736	1758	1736	1758	0.98
26	26	3.1e-06	0.00035	21.5	1.1	1	23	1764	1787	1764	1787	0.97

Sequence Information

Coding Sequence: atgatacaaaaaatgTTAACGCGACATAATATAGTTACAGATACTCCACATATGGAAACAATACCTATAAATCTTGTTGCTACTGAAGATGGTAGAACGCTTTTGGCAGTAACTGAACACAAAGACGGTATGTTAGAAATTGTTGCAACTCCAGTTATGCTTGTTGGACAAAATGAAACAACTTCATCATTggtcgatataaaaaatttaaatgggaATTTAATATTGCACTCGCctgtttttcaaataaatgttgaaaatattgtcAATGACTCAGAATTTCAGCAGGTATCGCAAAATTTTGAAGGCAATTCTGACAATATTGATCGAgtgaaattacaattatgcAAAGAAGTAAAAGacaaaaaagtaatttctcaGGAATATCAGTCTCTTCCTGTAGATGATTCATTAGCtgataaaaaagaggaaaagatttGTAAACAAAATACAACAAATGTAActgtaaaaaaacataatcttGGAAGgcctaagaaaaataaaataaatttagaagaTTCGGAAAGTTTAACATGCGAAATTTGTcatcaaaaatttgttaaacaaaCATTATATCGAAAACATATGGAAAATCATGCAGAAGAGAAACCACATCGATGTCCAAAATGTTCTGCATCATTCAATGTAccgtcaaattttactttacaCATGGCAACACATAATACAGGTGAACCAAAATGTCCAGAATGTGGAAAAAAGTTTGCAAGAATGGCTAGCTTGAAATCTCATATGTTGTTacatgaaaaagaagaaaatttattctgtaCAGAATGTGAAGATGCCTTCTCGACAAAAACTCAATTGGATGCACATTTAAAACTTCATGGAGAAAAATGGGCAATGGAGGAAATgcgaaaatgtaaattatgtaataaacaaTTCAGTCAACCAGCTTTGTACAGGCTTCATATTCGTGAACATTATAGGTTGCAGACAAAAGTAGTGAAACAGACAAAAAAGGGAACAAAACACAAAACAATGTATAAGTGTACCATATGtttgaaatcttttcaaaaaccAAGTCAATTAATGCGGCATATTAGAGTGCATACTGGTGAAAAACcgtttaaaTGTACAGTATGTGGTCGTGCATTCACGCAAAAAAGTTCATTGCAAATTCACACATGGCAACATAATGGTATTCGACCTCATGCTTGTGAATTTTGTAATGCCAAATTTAGTCAAAAAGgtAATTTAAATGCTCATATAATGAGAGTTCATAATATCCCAGAAGGAGAacctatatataaatgtaattattgttcatgtgtatttaaaaaagtcgGTAGTTTAAATAGTCACATGAAACGTATGCATACCGACATAAATgagggAAATGATGTTGCCGTTAATGACGATACTTTTCCAACTGATACTATGGAGTCCGACATACGTGCGACCGTGGATAACGTTATCACACAATTAGCATCTTTGGAATCTGATGCGCATCAAACTACGGAATCATCAAATTTCCAATCTTGTTTATTATCAGAAAATGTGTCGAAGAAAGATATACTGCAACAAGCATTAAAAAACAGTGGTCTATccagtaaaaataaaattatttccgaagGTGTATCAGaagcaaaaaaatttggaGCTCGTATTAATTTTGTCACATTATTGGATCGAGCACCTGACGGTGATACGAgaaaatatttgacgatAAAACAACGATGCGTAGGAAATGTAAGATGGTACGCGTGTACTTTTTGTCACAAAGAATTCAAGAAACCATCAGATCTGATTCGTCATTTGCGTGTACATACACAAGAAAAACCTTTTaagTGTACCTATTGTTATCGTTCGTTCGCTTTGAAATCTACTATGATAGCACACGAACGCACACATTCAAGTGTCAAAAGATACGTTTGTAATTCTTGCGACAAAACATTCGTCTCTCATGGTAGTTTAATTGCTCATACTAGattacaCGCAAAATCTGATAATAATAAGGATTCCAATATGCATATCACAGTTGATACTGATATTCATTCTACTAATCAATCGAAaactcaaataaaaaatatcaaatcaaaattatcacaAGAAGCAGAAACTCTAGTACCTCAAGTAATTTTACAAGAACCGTTGCTAATTAATGAtgtaggaaataaaatttgtgtagcacaaatatcttcaaaagaaaaacgtgCTTATGACGGAACTATCGACCAAACCAGACCGCACAAATGTTGGATTTGTCAGGCAGCATTCAGAAAGATTAGTCATTTGAAGCAGCATCATCGTCGTCATACGGGAGAACGTCCGTATAAATGCACAAAATGCGATagGAGATTTACATCGAATAGCGTTTTAAAATCGCATTTGCATACTCATGAAGATTCGAGACCCTATGGTTGTTCAGTTTGtaatgcaaaattttcaacacAAAGCAGCATGAAAAGACACATGGTTACTCACAGTAATAAAAGACCGTTCATGTGTCCATATTGTCacaaaacttttaaaacttatGTCAATTGTCGGAAACATATGAAAATACATAAACATGAATTGGTACAACGGcaacTAGAACAACAGAAAATCAGAATTCAAGAACAATCttcagataaattaaatttaaaggagAATTCTAAACAGGAAACGGCTCTCGAATCGTCTTCCTCTTCTGTCTCTATCACAACTATTAATTCCACCATTACCACCAATATTGCTACCACTACTACTACTCCCGCTATCGTCACAACATCCTCTTCTACATTTTCAGATAATCTTGTACTTTCTCGACTTGGATCAGttgaattatcatttcaatCACAACTTGGGTCAGAGTTTTCGCAAACTTTTCCCGAGTTTCAAAACATAgctgaagaaaaagaaaaaataagagcCGTTTTACCAACAAATTGCGATGCCACAACATTTATCAACCAGAACATATCGGGAATAGCTGTAACGAGTCTTGAAAATTCACAGATATTACACGCCGATGAAGCTGGTTCAGTTACATTGCCGATTTATTCCGGCGATCAGACACTTACACCAGAAAGCATACGGGAAATAGAAGAAACATtgaatcaacaattttttaatatagggATGAATCTTAACCTAGGAAGTAATCAGTCGAGACATtcgaataatacaaatacGAATGATTTCGATCATATGAAAGAACAACAGCCTGTAATGAatgtaatatatgaaaataataatagcgaTAATAGTGATAGTAATGTAGAAACATCTAGAGAACATGTTTTTTCGTCACAATTAGATTCATTTGAGATGGATCATATTGCTTTGCAAtcCGACGCTGAAATCGACATCGGTTTAGATACAAGAAATTCAACTAATATGGCGAGTATATTGCCtagaaatgtgaaaaatgaaCATGAATTTTCTGTTTGTGTTACGACATCAGATAATACAAACGTTGAACAAACAGAGAGATCTGGTATGCAAGCAGTAGTATTTGTTTCTCAGCAAAATTTTCCTAGAAAAGAGGGGGTAGAAGATAAATTTGCAATAGAAGAGACTCACAAGAGCAATATCATCCATAAGCAATGTACAATCAACCCGATATTTTTTACAGAAGAATTTCGAGAAACATCGCAAAATTTCAAGACTCAATCAAATACGCGCAGTTTGTCATCCGATGTTACAGAAATTAAAGTCGCTACGAGTAAGATATCTCGTGGACAATCTTTATTACAATGTCATATGTGTAATCAACAAGGATTCACAACGATtgcattaaaaGAACATTTGACAAGCCATCGTGGAACAAAAGAATATCAATGTACGGAatgttcttcaaaattttacacAAATGCTGGATTAAATAGACACTCaaagattcattttattaaacaattatataaatgttcgtCGTgtgacaaatattttaatgataagatCGAACTACAATCGCACTCTAAAATTCATGAGATTCCAATATGGAATGCATCAGAAATAAATAGCACGACAGAAAATTCAACACTTTCTTCGGAAATGCAACCAGTTGTAAATGGTCATTCatctttaaatatcataatagatACAGATTCTGCAGTTTCGGAAAAAGTTCTGTTAGATACGGTAGCAGAAAAAGAAGTAATGGATCGAGTGGAAAATATCTTGGTCGAGGAAAAGGAACGGAAGGAATATACGAATAAGTGTAAATATTGTCCGAAAACATTTCGCAAACCAAGTGATCTTATAAGACatacacgtacacacacagGAGAACGACCGTATAAGTGCAATTACTGTAATAAAAGTTTCGCTGTAAAATGTACTTTGGATTCACATACGAAAGTTCATACcggaaaaaaaacatttcgttGTCACGTATGCAACAGTTTATTTGCGACCAAAGGTAGTTTGAAAGTTCATATGCGTTTACATACAGgttcGAAACCATTTAAATGCCCTATTTGTGATTCGAGATTTCGAACTTCCGGTCATAGAAAAGTGCATTTATTGAAACATGCACgtgaatataaagataatccaaaaagaaaacaaaaacatttaaaagttACGGCTATAGCCGAAGTGGCAGCTAATCTtgaaaaatgtgaaagaaaagagaaggaagtaAATAACTTTGATACAAAGCAACAACTATCACAGGAACAGCTTTCCCAAACAGGATTAATTTCTCATTTGGATGCATATAGTATCGAAACAGCTGCTTCCTGTTTATCCGATCAAATTAACTTCGACACGGAAGGTGTCGCGTCAAACAACAATCAAACAATTGTATcgataaatgaaaacaatCATTTAGTTAccaatttacattttcttttaacaaatgGTCTTGTTACCATTCAAACCGAAGAATCGTTACTTCCACAATCGTCAAATGACAATTTGCATCATCGACCGACTATAATTTCCGATGCCGAGTGTACATTAACAACATCTAGTCTAGCATCCGAtactaataatgaaaatactaataagaatgaaaatcaTATAGAATTGATGTTAAAAACACCATCGAGTAATTGTCTTTTAACGGTACCAACGCTGACACCGCAGTTAGAATCATTTTCAAAGATGCCTGCGCAAAAGGCGTTGCCAACAGTATCGGATAAAGTAACAATTAAAGGGAATTCATCCAAGAAAGAATGTGACATTTGTGGGAAAACATTTACAAAACCTTATCAAGTCGAAAGACATAAACGAATTCATACCGGTGAAAGGCCATACAAGTGTGATTTATGTACAAAATCATTTGCTCAAAAATCAACTTTACAGATGCATCAAAAACATCATACTGGCGATCGTCCATATGCTTGCTCGTATTGTGAATATTCCTTTACGCAAAAAGGCAACCTTCGAACACACGTGAAACGTGTTCATCAATTGGATACTGTTGACACGAAGAAATGGAATCGTATACGTCAATCTTTCTTACCCAAAACATATAATCAAGAAAACACAATCGAAACTAAGAAtctaaatttagataatatatcgTTTGTTGAACTTCTTAAGGAATGA
Protein Sequence: MIQKMLTRHNIVTDTPHMETIPINLVATEDGRTLLAVTEHKDGMLEIVATPVMLVGQNETTSSLVDIKNLNGNLILHSPVFQINVENIVNDSEFQQVSQNFEGNSDNIDRVKLQLCKEVKDKKVISQEYQSLPVDDSLADKKEEKICKQNTTNVTVKKHNLGRPKKNKINLEDSESLTCEICHQKFVKQTLYRKHMENHAEEKPHRCPKCSASFNVPSNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWAMEEMRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKKGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNIPEGEPIYKCNYCSCVFKKVGSLNSHMKRMHTDINEGNDVAVNDDTFPTDTMESDIRATVDNVITQLASLESDAHQTTESSNFQSCLLSENVSKKDILQQALKNSGLSSKNKIISEGVSEAKKFGARINFVTLLDRAPDGDTRKYLTIKQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKCTYCYRSFALKSTMIAHERTHSSVKRYVCNSCDKTFVSHGSLIAHTRLHAKSDNNKDSNMHITVDTDIHSTNQSKTQIKNIKSKLSQEAETLVPQVILQEPLLINDVGNKICVAQISSKEKRAYDGTIDQTRPHKCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSVCNAKFSTQSSMKRHMVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELVQRQLEQQKIRIQEQSSDKLNLKENSKQETALESSSSSVSITTINSTITTNIATTTTTPAIVTTSSSTFSDNLVLSRLGSVELSFQSQLGSEFSQTFPEFQNIAEEKEKIRAVLPTNCDATTFINQNISGIAVTSLENSQILHADEAGSVTLPIYSGDQTLTPESIREIEETLNQQFFNIGMNLNLGSNQSRHSNNTNTNDFDHMKEQQPVMNVIYENNNSDNSDSNVETSREHVFSSQLDSFEMDHIALQSDAEIDIGLDTRNSTNMASILPRNVKNEHEFSVCVTTSDNTNVEQTERSGMQAVVFVSQQNFPRKEGVEDKFAIEETHKSNIIHKQCTINPIFFTEEFRETSQNFKTQSNTRSLSSDVTEIKVATSKISRGQSLLQCHMCNQQGFTTIALKEHLTSHRGTKEYQCTECSSKFYTNAGLNRHSKIHFIKQLYKCSSCDKYFNDKIELQSHSKIHEIPIWNASEINSTTENSTLSSEMQPVVNGHSSLNIIIDTDSAVSEKVLLDTVAEKEVMDRVENILVEEKERKEYTNKCKYCPKTFRKPSDLIRHTRTHTGERPYKCNYCNKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFKCPICDSRFRTSGHRKVHLLKHAREYKDNPKRKQKHLKVTAIAEVAANLEKCERKEKEVNNFDTKQQLSQEQLSQTGLISHLDAYSIETAASCLSDQINFDTEGVASNNNQTIVSINENNHLVTNLHFLLTNGLVTIQTEESLLPQSSNDNLHHRPTIISDAECTLTTSSLASDTNNENTNKNENHIELMLKTPSSNCLLTVPTLTPQLESFSKMPAQKALPTVSDKVTIKGNSSKKECDICGKTFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACSYCEYSFTQKGNLRTHVKRVHQLDTVDTKKWNRIRQSFLPKTYNQENTIETKNLNLDNISFVELLKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_00141342;
80% Identity: -