Basic Information

Insect: Apis laboriosa
Gene Symbol: ZNF236
Assembly: GCA_014066325.1
Location: JACEOM010001478.1:75256-83614[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00068 0.13 13.8 3.0 2 23 176 197 175 197 0.96

2 24 2.2e-05 0.0042 18.4 1.0 1 23 203 225 203 225 0.98

3 24 2.8e-06 0.00052 21.3 0.4 2 23 231 252 231 252 0.97

4 24 0.0073 1.4 10.5 0.3 3 23 260 280 258 280 0.96

5 24 6e-05 0.011 17.1 0.9 2 23 291 312 291 312 0.98

6 24 6.5e-07 0.00012 23.3 1.1 1 23 333 355 333 355 0.99

7 24 5.2e-06 0.00098 20.4 0.7 1 20 361 380 361 383 0.95

8 24 2.5e-05 0.0047 18.3 0.7 1 23 389 412 389 412 0.95

9 24 0.00017 0.033 15.7 4.1 1 23 421 444 421 444 0.98

10 24 1.7e-06 0.00031 22.0 2.1 1 23 573 595 573 595 0.98

11 24 0.0024 0.46 12.0 6.7 1 23 679 701 679 701 0.98

12 24 3e-05 0.0057 18.1 5.1 1 23 707 729 707 729 0.99

13 24 2e-05 0.0037 18.6 0.8 3 23 737 757 735 757 0.97

14 24 0.00036 0.068 14.7 7.6 1 23 763 785 763 785 0.98

15 24 0.89 1.7e+02 4.0 1.3 2 23 1177 1198 1176 1198 0.94

16 24 0.00063 0.12 13.9 1.3 1 23 1204 1226 1204 1226 0.98

17 24 0.00021 0.04 15.4 1.5 1 23 1232 1254 1232 1254 0.98

18 24 1.3e-07 2.5e-05 25.5 2.1 2 23 1331 1352 1330 1352 0.98

19 24 0.00024 0.046 15.2 4.1 1 23 1358 1380 1358 1380 0.99

20 24 8.3e-05 0.016 16.7 1.9 1 23 1386 1408 1386 1408 0.98

21 24 0.00025 0.048 15.1 2.6 1 23 1414 1436 1414 1436 0.98

22 24 2.4e-06 0.00046 21.5 0.6 2 23 1653 1674 1652 1674 0.97

23 24 1.2e-05 0.0022 19.3 4.5 1 23 1680 1702 1680 1702 0.98

24 24 2.4e-06 0.00045 21.5 1.1 1 23 1708 1731 1708 1731 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00068	0.13	13.8	3.0	2	23	176	197	175	197	0.96
2	24	2.2e-05	0.0042	18.4	1.0	1	23	203	225	203	225	0.98
3	24	2.8e-06	0.00052	21.3	0.4	2	23	231	252	231	252	0.97
4	24	0.0073	1.4	10.5	0.3	3	23	260	280	258	280	0.96
5	24	6e-05	0.011	17.1	0.9	2	23	291	312	291	312	0.98
6	24	6.5e-07	0.00012	23.3	1.1	1	23	333	355	333	355	0.99
7	24	5.2e-06	0.00098	20.4	0.7	1	20	361	380	361	383	0.95
8	24	2.5e-05	0.0047	18.3	0.7	1	23	389	412	389	412	0.95
9	24	0.00017	0.033	15.7	4.1	1	23	421	444	421	444	0.98
10	24	1.7e-06	0.00031	22.0	2.1	1	23	573	595	573	595	0.98
11	24	0.0024	0.46	12.0	6.7	1	23	679	701	679	701	0.98
12	24	3e-05	0.0057	18.1	5.1	1	23	707	729	707	729	0.99
13	24	2e-05	0.0037	18.6	0.8	3	23	737	757	735	757	0.97
14	24	0.00036	0.068	14.7	7.6	1	23	763	785	763	785	0.98
15	24	0.89	1.7e+02	4.0	1.3	2	23	1177	1198	1176	1198	0.94
16	24	0.00063	0.12	13.9	1.3	1	23	1204	1226	1204	1226	0.98
17	24	0.00021	0.04	15.4	1.5	1	23	1232	1254	1232	1254	0.98
18	24	1.3e-07	2.5e-05	25.5	2.1	2	23	1331	1352	1330	1352	0.98
19	24	0.00024	0.046	15.2	4.1	1	23	1358	1380	1358	1380	0.99
20	24	8.3e-05	0.016	16.7	1.9	1	23	1386	1408	1386	1408	0.98
21	24	0.00025	0.048	15.1	2.6	1	23	1414	1436	1414	1436	0.98
22	24	2.4e-06	0.00046	21.5	0.6	2	23	1653	1674	1652	1674	0.97
23	24	1.2e-05	0.0022	19.3	4.5	1	23	1680	1702	1680	1702	0.98
24	24	2.4e-06	0.00045	21.5	1.1	1	23	1708	1731	1708	1731	0.97

Sequence Information

Coding Sequence: atgatacaaaaaatgtTAACGCGACACAATATAGTTACAGAAACTCCACATATGGAAACAATACCTATAAATCTTGTTGCTACCGAAGATGGTAGAACGCTTTTGGCAGTAACTGAACATAAAGATGGTATGTTGGAAATTGTTGCAACTCCAGTTATGCTTGTTGAACAAAATGAAACAACTTCATCGTTGGTCGatgtaaaaaatctaaatggaaatttaatattgcattcgCctgtttttcaaataaatgttgaaaatattgtcAATGACTCAGAATTTCAGCAGGTATCGCAAAATTTTGAGGGCAATTCTGATAATATtgatcgaatgaaattatataaagaagtaaaagacaaaaaagtaatttctcaGGAATATCAGTCTCTTTCTATGGATGATTCATTAGCTgataaaaaagaggaaaagatttGTAAACAAAATACAGCAAATGTAActgtaaaaaaacataatcttGGAAGgcctaagaaaaataaaataaatttagaaAATTCGGAAAGTTTAACATGCGAAATTTGTcatcaaaaatttgttaaacaaACATTATATCGAAAACATATGGAAAATCATGCAGAAGAGAAACCACATCGGTGTCCAAAATGTTCTGCATCATTCAATGTAccgtcaaattttactttacaCATGGCAACGCATAATACAGGTGAACCAAAATGTCCAGaatgtggaaaaaaatttgcaagaatGGCCAGCTTGAAATCTCATATGTTATTacatgaaaaagaagaaaatttattctgtaCAGAATGTGAAGATGCCTTCTCCACAAAAactCAATTGGATGCACATTTAAAACTTCATGGGGAAAAATGGGCAATGGAGGAAATgcgaaaatgtaaattatgtaataaacaatttagtCAACCAGCTTTGTACAGGCTTCATATTCGTGAACATTATAGGTTGCAGACAAAAGTAGTGAAACAGACAAAAAAGGGAACAAAACACAAAACGATGTATAAGTGTACCATATGtttgaaatcttttcaaaaaccAAGTCAATTAATGCGGCATATTAGAGTGCATACTGGTGAAAAACcctttaaaTGTACAGTATGTGGTCGTGCATTCACGCAAAAAAGTTCATTGCAAATTCATACATGGCAACATAATGGTATTCGACCTCATGCTTGTGAATTTTGTAATGCCAAATTTAGTCAAAaagGTAATTTAAATGCTCATATAATGAGAGTTCATAATATCCCAGAAGGAGAacctatatataaatgtaattattgttCATGTGTATTTAAAAAGGTTGGTAGTTTAAATAGTCACATGAAACGTATGCATACCGACATAAATgagggAAATGTGAACGATGCTGTTAACGATGATACTTTCCCAACTGATACCATGGAGTCTGATATACGTGCAACCGTGGATAACGTTATTACACAATTAGCATCTTTGGAATCTGAAACGCATCAAACTACGGAATCATCAAATTTCCAATCTTGTTTATTATCAGAAAATGTGTCGAAGAAAGATATACTGCAACaagcattaaaaaatagtgGTTTATccagtaaaaataaaattatttccgaaaGTGTATCAGaagcaaaaaaatttggaGCTCGTGTTAATTTTGTCACATTATTGGATCGAGCACCGGACGGTGATACGAGaaaatatttgacgaTAAAACAACGATGCGTAGGAAATGTAAGATGGTACGCGTGTACTTTTTGTCACAAAGAATTCAAGAAACCATCAGATCTGATTCGTCATTTGCGTGTTCATACACAAGAAAAACCTTTTaagGATTCCAATATGCATATCACAATTGATACTGATATTCATTCTACTAATCAATCGAAAattcaagtaaaaaataaatcaaaattatcacaAGAAGCAGAAACTCTAGTACCTCAAGTAATTTTACAAGAACCGTTGCTAATTAATGATGTGGGAAACAAAATTTGTGTAGCACAAATATcttcaaaagaaaaacgtgCTTATGACGGAACTATCGATCAAACCAGACCGCACAAGTGTTGGATTTGTCAGGCAGCATTCAGAAAGATTAGTCATTTAAAGCAGCATCATCGTCGTCATACAGGAGAACGTCCGTATAAATGCACAAAATGcgatagGAGATTTACATCGAATAGCGTTTTAAAATCACATTTGCATACTCATGAGGATTCGAGACCATATGGTTGTTCAATTTgtaatgcaaaattttcaaCGCAAAGCAGCATGAAAAGACACATGGTTACACACAGTAATAAAAGACCGTTCATGTGTCCATATTGTCacaaaacttttaaaacttaCGTCAATTGTCGGAAACATATGAAAATACATAAACATGAATTGGTACAACGGCAACTGGAACAACAGAAAATCAGAATTCAAGAACAGTCTTcagataaattgaatttaaaggaaaattctAAACAGGAAGCGGCTCTTGAATCGTCTTGTTCCTCTTCTGTCTCTATCACAACTATTAATTCCACCATTACCACCAATATTGCTACCACTACTACTACTCCCGCTATCGTCACAACATCCTCTTCTACATTTTCAGATAATCTTGTACTTTCTCGACTTGGATCAGttgaattatcatttcaatCACAACTTGGGTCAGAGTTTTCACAAACTTTTCCCGAGTTTCAAAACATaagtgaagaaaaagaaaaaataagagcaGTTTTACCAACAAATTGCGATGCTACAACATTTATTAATCAGAACATATCGGGAATAGCTGTAACGAGTCTTGAAAATTCACAGATATTACACGCCGATGAAGCTGGTTCAGTTACATTGCCGATTTATTCCGGAGATCAGACACTTACACcaGAAAGCATACGGGAAATAGAAGAAACATtgaatcaacaattttttaatataggaaTGAATCTTAATTTAGGGAGTAATCAGACGAGACATTCGAATAATACAAATACGAATGATTTCGATCATATGAAAGAACAACAGCCTGTAATGaatgtaatatatgaaaataataatagcgataatagtaatagtaatgtAGAAACATCTAGAGAACATGTTTTTTCGTCACAATTAGATTCATTTGAGATGGATCATATTGCTTTGCAAtcGGACGCTGAAATCGACATCGGTTTAGATACAAGAAATTCAACTAATATGGCGAGTATATTGcctagaaatatgaaaaatgaacatGAACTTTCTGTTTGTGTTACGACATCAGATAATACAAACGTTGAACAAACAGAGAGATCTGGTATGCAAGCAGTGGTATTTGTTTCTCAGCAAAATCTTCCTAGAAAAGAGGGGATAGAAGATAAATTTGCAATAGAAGAAACTCACAAGAGCAATATCATCCATAAGCAATGTACAATCAACCCGATATTCTTTACAGAAGAATTTCGAGAAACATCGCAAAATTTCAAGACTCAACCGAATACGCGTAGTTTGTCATCCGATGTTGCAGAAATTAAAGTCGCTACGAGTAAAATATCTCGTGGGCAATCTTTATTACAATGTCATATGTGTAACCAACAAGGATTCACAACAATTgcattaaaagAACATTTGACAAGCCATCGTGGAACAAAAGAATATCAATGTACGGAatgttcttcaaaattttacacAAATGCTGGATTAAATAGACACTCgaagattcattttattaaacaattatataaatgttcgtCGTgtgacaaatattttaatgataaaatcgaACTGCAATCGCACTCTAAAATTCATGAGATTCCAATATGGAATGCATCAGAAATAAATAGCACGACAGAAAATTCAACGCTTTCATCGGAAATGCAACCAGTTGTAAATGGTCATTCATCTTTGAATATCATAATAGATACAGATTCTGCAGTTTCGGAAAAAGTTCTGTTAGATACGGTAGCAGAAAAAGAAGTAATGGATCGAGTGGAAAATATCTTGGTCGAGGAAAAGGAACGGAAGGAGTATACGAATAAGTGTAAATATTGTCCGAAAACATTTCGCAAGCCAAGTGATCTCATAAGACatacacgtacacacacaGGAGAACGACCGTACAAGTGCAATTACTGTAATAAAAGTTTCGCTGTAAAATGTACTTTGGATTCACATACGAAAGTTCATActggaaaaaaaacatttcgttGTCACGTATGCAACAGCTTATTTGCGACTAAAGGTAGTTTGAAAGTTCATATGCGTTTACATACAGgttcAAAACCATTTAAATGCCCTATTTGTGATTCGAGATTTCGAACTTCCGGTCATAGAAAAGTGCATTTATTGAAACATGCACGTGAATACAAAGATAATCcaaaaaggaaacaaaaacatttaaaagttACGGCTATAGCCGAAGTGGCAGCTAATCTTGAAAAATGTGACAGAAAAGAGAAGGAGGTAAACAACTTTGATACAAAGCAACAACTGTCACAGGAACAGCTTTCGCAAACAGGATTAATTTCCCATTTGGATGCATATAGTATTGAAACAGCTGCTTCCTGTTTATCCGATCAAATTAACTTCGACACGGAAGGTGTCGCGTCAAACAACAATCAAACAATTGTATCGATAAATGAAAACAATCATTTAGTTactaatttacattttcttttaacaaatgGTCTTGTTACCATTCAAACCGAAGAATCGTTACTTCCACAATCGTCAAATGACAATTTGCATCATCGACCGACTATAATTTCCGATGCTGAGTGTACATTGACAACATCTAGTCTAGCATCCGAtactaataatgaaaatactaataagaatgaaaatcaTATAGAATTAATGTTAAAGACACCATCGAGTAATTGTCTTTTAACGGTACCAACGCTGACACCGCAGTTAGATCAATCATTTTCAAAGATGCCTGCGCAAAAGGCGTTGCCAACAGTATCGGATAAAGTAGCAATTAAAGGGAATTCATCCAAGAAAGAATGTGACATTTGTGGGAAAACATTTACAAAACCTTATCAAGTGGAAAGACATAAACGAATTCATACCGGTGAAAGGCCATACAAGTGTGATTTATGTACAAAATCATTTGCTCAAAAATCAACTTTACAGATGCATCAGAAACATCATACTGGTGATCGTCCATATGCTTGCTCGTATTGTGAATATTCCTTTACGCAAAAAGGCAATCTTCGAACACATGTGAAACGTGTTCATCAATTGGATACTGTCGACACGAAGAAATGGAATCGCGTGCGTCAATCTTTCTTACCCAAAACGTATAATCAAGAAAACACAATCGAAACTAAGAATTTAAATCTAGATAATATATCGTTTGTTGAACTTCTTAAGGAATGA
Protein Sequence: MIQKMLTRHNIVTETPHMETIPINLVATEDGRTLLAVTEHKDGMLEIVATPVMLVEQNETTSSLVDVKNLNGNLILHSPVFQINVENIVNDSEFQQVSQNFEGNSDNIDRMKLYKEVKDKKVISQEYQSLSMDDSLADKKEEKICKQNTANVTVKKHNLGRPKKNKINLENSESLTCEICHQKFVKQTLYRKHMENHAEEKPHRCPKCSASFNVPSNFTLHMATHNTGEPKCPECGKKFARMASLKSHMLLHEKEENLFCTECEDAFSTKTQLDAHLKLHGEKWAMEEMRKCKLCNKQFSQPALYRLHIREHYRLQTKVVKQTKKGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTVCGRAFTQKSSLQIHTWQHNGIRPHACEFCNAKFSQKGNLNAHIMRVHNIPEGEPIYKCNYCSCVFKKVGSLNSHMKRMHTDINEGNVNDAVNDDTFPTDTMESDIRATVDNVITQLASLESETHQTTESSNFQSCLLSENVSKKDILQQALKNSGLSSKNKIISESVSEAKKFGARVNFVTLLDRAPDGDTRKYLTIKQRCVGNVRWYACTFCHKEFKKPSDLIRHLRVHTQEKPFKDSNMHITIDTDIHSTNQSKIQVKNKSKLSQEAETLVPQVILQEPLLINDVGNKICVAQISSKEKRAYDGTIDQTRPHKCWICQAAFRKISHLKQHHRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDSRPYGCSICNAKFSTQSSMKRHMVTHSNKRPFMCPYCHKTFKTYVNCRKHMKIHKHELVQRQLEQQKIRIQEQSSDKLNLKENSKQEAALESSCSSSVSITTINSTITTNIATTTTTPAIVTTSSSTFSDNLVLSRLGSVELSFQSQLGSEFSQTFPEFQNISEEKEKIRAVLPTNCDATTFINQNISGIAVTSLENSQILHADEAGSVTLPIYSGDQTLTPESIREIEETLNQQFFNIGMNLNLGSNQTRHSNNTNTNDFDHMKEQQPVMNVIYENNNSDNSNSNVETSREHVFSSQLDSFEMDHIALQSDAEIDIGLDTRNSTNMASILPRNMKNEHELSVCVTTSDNTNVEQTERSGMQAVVFVSQQNLPRKEGIEDKFAIEETHKSNIIHKQCTINPIFFTEEFRETSQNFKTQPNTRSLSSDVAEIKVATSKISRGQSLLQCHMCNQQGFTTIALKEHLTSHRGTKEYQCTECSSKFYTNAGLNRHSKIHFIKQLYKCSSCDKYFNDKIELQSHSKIHEIPIWNASEINSTTENSTLSSEMQPVVNGHSSLNIIIDTDSAVSEKVLLDTVAEKEVMDRVENILVEEKERKEYTNKCKYCPKTFRKPSDLIRHTRTHTGERPYKCNYCNKSFAVKCTLDSHTKVHTGKKTFRCHVCNSLFATKGSLKVHMRLHTGSKPFKCPICDSRFRTSGHRKVHLLKHAREYKDNPKRKQKHLKVTAIAEVAANLEKCDRKEKEVNNFDTKQQLSQEQLSQTGLISHLDAYSIETAASCLSDQINFDTEGVASNNNQTIVSINENNHLVTNLHFLLTNGLVTIQTEESLLPQSSNDNLHHRPTIISDAECTLTTSSLASDTNNENTNKNENHIELMLKTPSSNCLLTVPTLTPQLDQSFSKMPAQKALPTVSDKVAIKGNSSKKECDICGKTFTKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPYACSYCEYSFTQKGNLRTHVKRVHQLDTVDTKKWNRVRQSFLPKTYNQENTIETKNLNLDNISFVELLKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215155;
90% Identity: iTF_00141342;
80% Identity: -