Ador000704.1
Basic Information
- Insect
- Apis dorsata
- Gene Symbol
- bab1_3
- Assembly
- GCA_000469605.1
- Location
- NW:129002-134332[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1 4.1e+03 -3.3 0.0 14 22 253 261 247 261 0.67 2 2 2.2e-07 0.0003 19.5 0.1 1 39 320 358 320 372 0.92
Sequence Information
- Coding Sequence
- ATGAATGTTTTCTTAAGGGATTCTTCCCGAAAGCGACGCGAAAATCTGAGAGGAGTCGACCAAGCTGAAAATTCcTGCAGAATAATGGAAAGCGGAAGCAACCTGCCTACGCCGGGTAATTATCCTGGTGGGGATCGTCAACAGTTTTGCGTTTCATGGAACTCTCATCAATCAAATATGCACAGTGCATTTCCAAAACTTTTAAGTTCTGAACAATTTGTTGATGTCACTTTAGCCTGTGATGGAGGCTCAATAAAGTGTCACAAAGTGGTATTATCCGCTTGTAGTGATTATTTGGAACGTTTACTATTAGAAATACCTTGCACTCatcctattatatttttgagagaTATGAGAATGTGGGAACTTCAAGCATTAGTGGAGTTTATGTATCGTGGTGAAGTATATGTAGAACAACAACAACTTGGTAAATTAATGCAAGCTGCTGAAGTTTTGcagGTTCGTGGTTTATTTACTCAAGGATCAAGTGATAATTCTTCAAGTGAAAGTGGTTCACAACAATGCGATTCTAATGCTACTGTTGCACCTACGATCACACAACAGGATGGATCTGACTATAAATCTGAGGAAACTCCATCTGAGGATGGAACTTCAAATACTAATTTTCTAGAGAATACATCGATTGCTGCATCTAGTACAGCAAATGCTCCATCACACAGTACTACACCGGTTCCACAGAATTctaattcatcaaattttatgaatatggaGCACAGTGAGGCATTACAACATTTGGAAAAAGCACTTAGTGTTTGCGAAGCAACTTTAACTGAGACTCAGGGCATGGTTAGAATGGAACCAGACGAGCAATTTACCCAACAGCAAGATGTCAAGCCATACTCCATTAGTATGGTACCGAGCAGCAATTGTAATCCTAGTAGCCCGTTTCCTGCAATTGAAGGTAAGGAGGAaggtTATCAAAGACGACAAAGACGTTCAGAAGAGGAATTGAAGCAAGCTTCGGATATGGTAGCACGTGGTATGACGTTTCAAGTTGCTTCAGAAAAGTACAAAATTCCGATAAGTACGATTCGATTCTATATGGTTAGGAAAGGTATATTACAAAGGCGAAAACGCGGTCGTGGTTCGAGTAATCTTGGCATGAATAGTCAACCGGGAAGTCCTGCAAGTCCGCCATATCATATGATGAACTATCGTTTGCCAGAAAGCCTAAACTCCAGCCTACCGTAG
- Protein Sequence
- MNVFLRDSSRKRRENLRGVDQAENSCRIMESGSNLPTPGNYPGGDRQQFCVSWNSHQSNMHSAFPKLLSSEQFVDVTLACDGGSIKCHKVVLSACSDYLERLLLEIPCTHPIIFLRDMRMWELQALVEFMYRGEVYVEQQQLGKLMQAAEVLQVRGLFTQGSSDNSSSESGSQQCDSNATVAPTITQQDGSDYKSEETPSEDGTSNTNFLENTSIAASSTANAPSHSTTPVPQNSNSSNFMNMEHSEALQHLEKALSVCEATLTETQGMVRMEPDEQFTQQQDVKPYSISMVPSSNCNPSSPFPAIEGKEEGYQRRQRRSEEELKQASDMVARGMTFQVASEKYKIPISTIRFYMVRKGILQRRKRGRGSSNLGMNSQPGSPASPPYHMMNYRLPESLNSSLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228300;
- 90% Identity
- iTF_00966113;
- 80% Identity
- iTF_00141311;