Acer004771.2
Basic Information
- Insect
- Apis cerana
- Gene Symbol
- lilli
- Assembly
- GCA_029169275.1
- Location
- CM054902.1:13670774-13687386[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-07 0.0058 16.5 0.4 44 130 31 119 22 131 0.57 2 2 6.7e-09 9.3e-05 22.5 0.5 342 382 208 248 186 264 0.76
Sequence Information
- Coding Sequence
- ATGAAAGCCGCGGTTAAAGTCACGGACGTTGCCGGTGGCAAGAGTCTTCGCACCACTTTACCGCTGCAACCGGTGAATCCGGACGCCCGGGACAGTACGACGCAGCAGATTCAATCAAAATTAGGCAACTACTCGTTGGTGAAACATCTACTGGACGAGCCGAAACGGCTGATCGGCATCGAGGGTGTACCGCCAAGCCCTGCCCCGCCGTCGAcctcctcctttcttcgaATGAGTTCCAGCTCGGTCGGCGCGAATTCCAGGAGCTCGCCCTCCTCCCAAGAATTCAAGAAGCCGGGAGGGCCTCGCCCCGAtgcttcctcctcttcctcttcgtcGTGCTCGACTCATCAACGCGGTGGTTTCGTGAAGCCAGCCGACGGGAAGCCGCCGTACGGAGGCAGGGGTGGTTACCCCGGCCAGCCGGTGAAGCACGGGGGCAACAGCAACGATCATAGGAGCCACGGTTTATTACCCGCCAAAGGACCGCCCACGAATTCGCCCGGGAACGGAACGCTCGCTGGCAATTCCAGTATCGGGAATTCCAGCGGCAGCAGGCTTCACTGTGTCGGCAGCAGACTGTCCAGGTTACCTCTCGATAACGGCAGCTCGAGACCTGGCCCCACCGAGAACTCGGCCGATGTGGAGAATATATTAAAGGAAATGACCATGCCACCCACGCCTCTCACGGCCATCGCCCAGACGCCGAGGAAGGAGCTCGAGTCGAAGTTCACGTTCAATCCTGTGATGGCGAAGTTGACCGAAGTGACGCCGCAGGAAGCCACGAAGCCTCGTAAGTAA
- Protein Sequence
- MKAAVKVTDVAGGKSLRTTLPLQPVNPDARDSTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPPSPAPPSTSSFLRMSSSSVGANSRSSPSSQEFKKPGGPRPDASSSSSSSCSTHQRGGFVKPADGKPPYGGRGGYPGQPVKHGGNSNDHRSHGLLPAKGPPTNSPGNGTLAGNSSIGNSSGSRLHCVGSRLSRLPLDNGSSRPGPTENSADVENILKEMTMPPTPLTAIAQTPRKELESKFTFNPVMAKLTEVTPQEATKPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00088814;
- 90% Identity
- iTF_01069659;
- 80% Identity
- -