Asti002117.1
Basic Information
- Insect
- Aphodius sticticus
- Gene Symbol
- nfxl1
- Assembly
- GCA_963966075.1
- Location
- OZ014506.1:26885597-26901489[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 5e+04 -4.4 1.7 15 19 163 167 163 167 0.87 2 19 0.15 3.8e+03 -0.5 0.5 4 10 198 204 197 206 0.93 3 19 4.1e-08 0.001 20.5 17.2 1 19 212 229 212 229 0.99 4 19 3.1e-09 7.8e-05 24.0 18.2 1 19 265 283 265 283 0.98 5 19 0.7 1.7e+04 -2.7 1.9 6 10 308 312 307 312 0.90 6 19 1.5e-07 0.0038 18.7 16.0 1 18 318 335 318 336 0.98 7 19 0.51 1.3e+04 -2.2 1.4 5 10 360 365 360 365 0.95 8 19 2.1e-05 0.51 11.8 9.9 1 18 371 388 371 389 0.98 9 19 0.51 1.3e+04 -2.2 0.6 1 5 398 402 398 407 0.88 10 19 3.8e-05 0.96 11.0 15.6 3 18 425 440 423 441 0.91 11 19 9.2e-09 0.00023 22.5 13.5 1 19 450 468 450 468 0.97 12 19 0.00038 9.6 7.8 6.9 10 19 517 526 515 526 0.92 13 19 0.061 1.5e+03 0.7 5.6 1 12 536 546 536 546 0.88 14 19 2 5e+04 -4.9 4.6 15 19 573 577 572 580 0.61 15 19 0.19 4.8e+03 -0.8 7.6 1 11 616 626 606 627 0.80 16 19 1.1 2.7e+04 -3.3 0.5 5 10 643 648 643 648 0.82 17 19 1.1e-05 0.28 12.6 19.6 4 19 658 673 656 673 0.94 18 19 1e-05 0.26 12.8 11.7 1 16 716 730 716 736 0.93 19 19 0.93 2.3e+04 -3.0 0.5 6 10 766 770 765 770 0.88
Sequence Information
- Coding Sequence
- ATGAATACGGGAAAGAAGCAAACGAAGCCACGAAATGCGTGGACAATGCCACACCAAATGCAACCGAAGCCGgcaaatgccaataacctaaaaaaatccgAGCAAAAATTGAAGGAGGCCAATGCAAAATGTAAAGCTGCTGCTGAAAAACACGCCAAGGATTATCAATCCTCCGAGGAGGAAGATGAATTAGAAACCAAAGACATTATTGATGGTGTATTAAAGTTTTATACGTCTCCGAAAGAGGAATTTGGCATTTTAGGTAGAACTAAAGGATACCTTGAAGATGCTTTTATTTCCGGAGCTAACACTTGCCTCTTTTGCATGTCAAGCGTTAAACGAAATAATCAGATTTGGAACTGTTACGAATGTTTTTGCAGCTTCCATTTGCAATGCATTCAACGATGGGCAAAAGATACAATTACTCAGAGAAAGCAGAAGAGCGAGGATCAAATACAAGTGAGGCAGGTCAAAATAGCCTGGTATTGTCCGAATTGTAGGCACGAGTATCAACCGCAAGACGTTCCGTCCGAATACAGGTGCTTTTGCGAGAAAGTTGTCAATCCACAGTTTCTACCTTTGCTGATTCCCCATTCCTGCGGTGAAAAATGCGGGAAGCAGCTGAAACCGCTCTGCGGGCATACATGTGTCTTATTGTGTCATCCAGGTCCATGTCCTCCCTGCCCTCAAACCGTATCGTCAAAATGCTACTGCGGCGCTCAACCTGCAAAACCGCAGAGATGCTGCAACAAGGAGTGGTCCTGCGGATCCCCTTGCAACAAGACGCTCGTTTGCGGGAAGCACAAGTGCTCCCAGCCATGCCATCAAGGTGAGTGTCCACCTTGCTCGAAGAAGAGCATCCAGAAATGTCTCTGCGGTTTGTCGCAAAAATTACGAGACTGCGAGACCCCTCTGTGGCAGTGCGAAAAAGTCTGCGTAAAACCGCTAAAATGCGGCCACCATAGCTGCGCGGAGGTGTGTCATCCGGGACAATGCGGCGACTGCGTTCTCTCGAAAGCTCGTACCTGCCCGTGCGGAAAGTCCAACTTTCAGCTACCATGCACGGAGGAGACCCCGACCTGCGAGGATACTTGCGGAAAATTGCTGGAGTGCGGTCAGCATAGCTGCTATTATAAGTGTCACAAGGATAAATGTGGATCTTGCGCTGAAATTGTGACCAAATCGTGCCGCTGTGGCGCTCATACCAAAGAAGTTCAGTGCAAGAAACCGTTTCTATGCGAGACCAAGTGCAAGCAGATGAAGGATTGTTACAAGCATCCTTGCAATAGGAAGTGCTGCGACGGTAACTGTCCGCCTTGCGAAAAACCGTGCGGCCAGAAATTGAACTGCAGCAACCACAAATGCGGCTCCGTGTGCCACAGAGGCCCGTGCTACCCCTGCCAACTACAAGAAAAAGTCTTCTGCCGCTGTGGAGCTACTTCAATCACCGTACCCTGCGGAAGAAAGCACAAAACGCGACCACCCAAGTGCTCCATACTCTGCAAGATTCCGCCGGACTGTCATCATCCGAAACGCGATCGCCACAGGTGCCACTTTGGTGATTGTCCGCCCTGTAAGCAGATCTGCAACAAGATCCATGAGGAATGCTCGCACATCTGTCCAGCAACTTGTCACACATCCGTCCTGGTTAAAGTTGTCGAGGAGAAGAAAGCGTCCATGCCGTGGGAACAGACGGGACCGGTCCTCGAGAGGAAGTGCTTACCGTGTCCGGACTGTAATGTTCCCGTTCCGGTCACTTGCTTTGGGGGCCACGAGACATCCGATTGGCCCTGTTACCTTGCTAAGCCGGCCAGTTGCGGAAGACCATGTGGGAGGATGCTGGCTTGTCGGAATCATGCCTGTGCCAAAGGTTGTCATGTCGTGGTGAATGCTGAAAATGATGTTGATGCTGGAGAGGACTGCGATCGCTGTGATAATCCCTGCTCCAAAGAGAGACCAGAGGGATGTCCGCATTCTTGTCCAAAACCCTGCCATCCTGGAAATTGTCCACCCTGCAAGCAACTGGTGCGAATCAGATGCCATTGCGGTTTGAATCAACCGTATGTTTCTTGCAAGGACTGGATTATCCAGGAGAAGAAAGAAGAACTGCAATCTTGCGGCAACCAATGTCCACATAACtatCCGTGTGGTCACCGCTGTCGTACTAACTGCCATTCCGGTCCATGCCCAAATAGTGAGCTCTGCAAGAAGAAAATTAAGGTGACTTGTAAATGCAAGAGATTGAAGAAGGAGTTTTCATGTGAGACTGTTAGAAATGGTACAGCTGTGGTTAGTTGTGATGAGTTATGTGTggagaagaagaaagaagttgAAAAGATGGTGGCCGTAGAGGAAGAGCAGAAGAAGATTGAGGAAGAGATAAGGAACCAGAAGGAGTTGGAGAAGTTTGAGAAAAAATTCCATGGAAAGAAGAAACACAAGGAACGCAAAGTGCTGGAGGAAGTTGATGATAAAGGTTTCTTGAAGAAATACTGGGTTCCTATTGCTGCTGTTACAATAAGTGTTCTAGCGTCCATTTTTTATACGACATTGATGTAA
- Protein Sequence
- MNTGKKQTKPRNAWTMPHQMQPKPANANNLKKSEQKLKEANAKCKAAAEKHAKDYQSSEEEDELETKDIIDGVLKFYTSPKEEFGILGRTKGYLEDAFISGANTCLFCMSSVKRNNQIWNCYECFCSFHLQCIQRWAKDTITQRKQKSEDQIQVRQVKIAWYCPNCRHEYQPQDVPSEYRCFCEKVVNPQFLPLLIPHSCGEKCGKQLKPLCGHTCVLLCHPGPCPPCPQTVSSKCYCGAQPAKPQRCCNKEWSCGSPCNKTLVCGKHKCSQPCHQGECPPCSKKSIQKCLCGLSQKLRDCETPLWQCEKVCVKPLKCGHHSCAEVCHPGQCGDCVLSKARTCPCGKSNFQLPCTEETPTCEDTCGKLLECGQHSCYYKCHKDKCGSCAEIVTKSCRCGAHTKEVQCKKPFLCETKCKQMKDCYKHPCNRKCCDGNCPPCEKPCGQKLNCSNHKCGSVCHRGPCYPCQLQEKVFCRCGATSITVPCGRKHKTRPPKCSILCKIPPDCHHPKRDRHRCHFGDCPPCKQICNKIHEECSHICPATCHTSVLVKVVEEKKASMPWEQTGPVLERKCLPCPDCNVPVPVTCFGGHETSDWPCYLAKPASCGRPCGRMLACRNHACAKGCHVVVNAENDVDAGEDCDRCDNPCSKERPEGCPHSCPKPCHPGNCPPCKQLVRIRCHCGLNQPYVSCKDWIIQEKKEELQSCGNQCPHNYPCGHRCRTNCHSGPCPNSELCKKKIKVTCKCKRLKKEFSCETVRNGTAVVSCDELCVEKKKEVEKMVAVEEEQKKIEEEIRNQKELEKFEKKFHGKKKHKERKVLEEVDDKGFLKKYWVPIAAVTISVLASIFYTTLM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00137579;
- 90% Identity
- iTF_00981973;
- 80% Identity
- -