Basic Information

Insect: Aphodius sticticus
Gene Symbol: -
Assembly: GCA_963966075.1
Location: OZ014509.1:27544236-27553695[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 7.2 5.5e+02 2.8 0.4 1 19 266 284 266 285 0.90

2 19 0.02 1.5 10.8 2.4 1 23 371 394 371 394 0.89

3 19 4e-07 3e-05 25.6 0.8 3 23 459 479 457 479 0.97

4 19 2.7e-05 0.0021 19.8 2.1 2 23 495 516 494 516 0.97

5 19 1.3 98 5.1 0.1 2 23 524 546 523 546 0.94

6 19 0.0023 0.18 13.8 0.2 2 23 551 572 551 572 0.96

7 19 0.0024 0.19 13.7 0.0 1 23 594 616 594 616 0.97

8 19 0.0078 0.6 12.1 3.3 1 23 636 658 636 659 0.95

9 19 0.011 0.87 11.6 1.0 1 23 669 691 669 691 0.98

10 19 3.5e-06 0.00027 22.6 7.2 1 23 721 743 721 743 0.99

11 19 1.4 1.1e+02 5.0 2.6 3 23 765 785 763 785 0.97

12 19 0.026 2 10.4 1.4 1 23 807 829 807 829 0.97

13 19 0.11 8.8 8.4 0.3 2 23 843 865 842 865 0.96

14 19 0.00031 0.024 16.5 1.1 1 23 885 907 885 907 0.94

15 19 1 80 5.4 1.5 1 23 940 963 940 963 0.92

16 19 0.0017 0.13 14.2 0.1 2 23 974 995 974 995 0.97

17 19 0.00055 0.042 15.7 2.5 1 23 1002 1025 1002 1025 0.96

18 19 0.00075 0.057 15.3 2.7 1 23 1033 1055 1033 1055 0.99

19 19 0.0012 0.09 14.7 0.6 1 23 1073 1096 1073 1096 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	7.2	5.5e+02	2.8	0.4	1	19	266	284	266	285	0.90
2	19	0.02	1.5	10.8	2.4	1	23	371	394	371	394	0.89
3	19	4e-07	3e-05	25.6	0.8	3	23	459	479	457	479	0.97
4	19	2.7e-05	0.0021	19.8	2.1	2	23	495	516	494	516	0.97
5	19	1.3	98	5.1	0.1	2	23	524	546	523	546	0.94
6	19	0.0023	0.18	13.8	0.2	2	23	551	572	551	572	0.96
7	19	0.0024	0.19	13.7	0.0	1	23	594	616	594	616	0.97
8	19	0.0078	0.6	12.1	3.3	1	23	636	658	636	659	0.95
9	19	0.011	0.87	11.6	1.0	1	23	669	691	669	691	0.98
10	19	3.5e-06	0.00027	22.6	7.2	1	23	721	743	721	743	0.99
11	19	1.4	1.1e+02	5.0	2.6	3	23	765	785	763	785	0.97
12	19	0.026	2	10.4	1.4	1	23	807	829	807	829	0.97
13	19	0.11	8.8	8.4	0.3	2	23	843	865	842	865	0.96
14	19	0.00031	0.024	16.5	1.1	1	23	885	907	885	907	0.94
15	19	1	80	5.4	1.5	1	23	940	963	940	963	0.92
16	19	0.0017	0.13	14.2	0.1	2	23	974	995	974	995	0.97
17	19	0.00055	0.042	15.7	2.5	1	23	1002	1025	1002	1025	0.96
18	19	0.00075	0.057	15.3	2.7	1	23	1033	1055	1033	1055	0.99
19	19	0.0012	0.09	14.7	0.6	1	23	1073	1096	1073	1096	0.94

Sequence Information

Coding Sequence: ATGGCAGAGGAGACGTTTGGAAATTACAGCTCTTGCTGTCGACTGTGCTTATCGGACCAGTTCAACTCTTTGAAACCCATATTTGAAGATGCGAACAATACGACGCTGGTGCAGAAGATCCTAACATTCGTGGGCGTGGAGGTGGGTTCTGATGATAAGCTCTCAACGCTGCTCTGCGACCAATGTCGAACAAAAGTTGACACGTGGGACACATTCAAGAAAGAGTGCTCGCAGAACCAATCCAAACTAAAGACCTGGCTGACAAGCTGGTCTGCAAACCATGAAATTGCAGAAAcgAGCATCCAGGTCAAGGATGAACCCGTTGATCGGGAGGATGTACGACAAGAAGGATCTGATTATCAGATGGTTATCAAGTCTGAACTATCCACGGAAGAAGACTACTATGATGCTCCTGTTCTGTCCCCGCAGCAAACCATGGGGGAAGGAGCAAATGGAATCAAGATGAATGTTAATACCCATCAAGACGATGGATCCCAACATTCCATGGACAGTACTGCAGGCTCTGCTCCAAGCTTGGATTCCGAAGCAGACTTTTCGGAAAGTGACCTACAAAAGATTCAATTTGCCGCCGGGCTGCGGTTAAAATCCAGAGCCCTTACATCCAACCAGGCTGTAGATGTGCCGATAACAAAAGTAGAAGAAGCGTACCTGGAACGTAGTAGGGCTCTGTTGACTATGCTGTATTCGTTCAGGTGTGCCTGCCACAATGTATTCTACCCAACGGTCAAACGTCTGTATGGTCACCTTCGAGCTACTTACAACTGGTTCCCGATATTCACTTGTTACAATTGCGTTGTGACATTCCCAACGCGGTCACCAACTATGAAACATAGCGGTAGATGTTCGAAACCTTACTTGGAGAATAGCATCAGACTTGTAGAAGAAACGAAGAGaactgaaaacaaaataagGTTATACCAATATTGCAAGTGCACACAATGCGAGGCTTTATTTGCTTTCTTCGAAGACTACTGTGAGCACATCGATAGAGACCACATCGATGACGGCCCATTTGTTTGCAAATGTTCGAAAGAATTTGGGAAAATTGAAGAATACAAACAACACATGTACTTATCCTGCTACCTAAACTACTATTGTGACATCTGTTATAAAGTTTTTGAGACTTTGACTGACTTCAAAGTGCACTGCGAGACTGAGCACGACAAAGTCGAAGATTACGTCTTCGTCTCCTACCACGCAGAATTTAAGATTGCTGATACGTCTGAAATTAGAATTTCGAGAAAGCGAAAGATCGACCAGGTGTCACAAGATTCGCAGGAAGAAAGTGGGCATGTAGAGAAGAAATTCAACCCGAGTCGAATAAACCCCGTTGCTAAACCAGTCTCAATCAATTGTGAAGTTTGCAGCCGTGTCTTCAGCAATGCTTACAACCTCAAGAAGCACATGAAGACACACAAGCGTGCCAGCGACATACAAAATGGCTGGAAGAACGGTCCATCGTCTTGCGAAAAATGCGGAAAGACCTTCTCGACTTACTACAACATGGTCAGGCACAACAAGACACATAGCGAGAACGAACGGCATCTCCAGTGCGCACTGTGTACGGACAAATTTAGATTGGTTTCCGAGCTGAAAGATCACCTTATTTCGGTCCACGGCCAAGCGAATGTATGTCAAGAATGTGGTAAACAATTTGAATCGACTGAGGAACTTGATCAGCACAGGAGCGTGCATCTAAACATTAAAGTTTATCGCGATTCAAAGACGCATTCTTACCGTACTGGATCGAAGACGAGGTACACCTGTGAGCAGTGCGAGGCAGCTTTTGAAACCGAGGAAGAATTGGGCCGACATATGGCTTTACATCTGGTTAGTATCGAGACAAACGGTAATGGGGATGTTGATGACCAGAAGGACGCACGGTATTCATGCGAGGACTGCGGAAGGCATTACGTCAGTTACAAAGGTTTATGGTTGCACAATAAACGTCACCATCCTGAGAGGAAACCCACCCAACCGTCGTTCAAGTGCGAATATTGTCAACGGGTTTTGCAAACAAACGCTGCTTATCAAATGCATAAGCAGATGCACGAGCGCTTGATGAGACAACGCAATGCTTTGCAAGTTAAACAGCCTCCTCAGAGTTCCCGTAGGAAGGACGATGAGGACGATGACTATTTCACCTGCAAGCACTGTTTCAAAGTGTTCTCAAcgaaatataatctgaaaacgCATTTGAAGACGCATGGGATTAACGTTGCACCAGGGAGATCGTTTGCTAAGAACAGTAAAAATGTGAAGACATTTTGGTGTGATATATGCCATCAAGCTTGCCAAGGTTACCAAGAACTTCAGAGGCATAAGCAAGAGCACATCAATGAGAATCTCGGGGAAACGGATAGCGTGGAGGATGATATGGATGTAAAGCCCCAACTCTTCAATTGTGAGATTTGTTCGAAAGTGTTCTTGACGCAGCTGGCTTTTACCAGACATAAGCTGAAGCACCAAAATCAACAGAAAGGTTTGAAGAAAAGTAACTTTGTGTACTGCAAGTATTGCAAGGTCCCATTCTTGAATATGGAATCTTTGAATATGCATATGCTTCGTGAGCATGAAGAAGCTAATAATCAAAGGCCGACAAAGCAAGCTAACCAAAGGGCTGTTAAGAAATATGCTTGCAACTTGTGCAAGAAGTCGTTTGATACTTCTGGGGCTTTATGTTCACATCAAGGATGGCATAAGAGAGGACCAATACAAAAGCCatataaaaacgaaaaaaacttgAGGGAGATAAAGACGGAGGAAGCAGAGCCATCTACCAGTTACCAAGAAATGCATGCATGCCGCACTTGTGGGTTGTGCTTCTTGACGGACACTTCATTGCAGCTTCATATTTTGGAAGCGCATAGGAATATAAATGCAACAATTATCTCCCCAAGATGCAATATTTGTAATATGGAATTTGCTACATCTGAAGCCTATGAGATTCACCAACAGCTTCATAGAGAAAACACTGCTgcatttaaatgtaaatattgtcCGAAAACATTTGCAAAATGTGAATCGGTTAATATGCATATCAATCAAGTTCACCCGCAATACAACGAAGGCAGATTTAAATGCCACCAATGCAACAGGCTGTTTGAAAAGCAGAACGCTTTGACCATTCATTTGAAAGTCCACGATCGGCAGAAGATGACAGGTGTAGTACCCAAAGAGCCAAAGCAAAGGGTGTACTCATGCTCGATCTGCCACACTAGCTTCGAAATAGCCAAAGATTTGAGAAATCACATAATTGCAAAGCACCCGTTTTAA
Protein Sequence: MAEETFGNYSSCCRLCLSDQFNSLKPIFEDANNTTLVQKILTFVGVEVGSDDKLSTLLCDQCRTKVDTWDTFKKECSQNQSKLKTWLTSWSANHEIAETSIQVKDEPVDREDVRQEGSDYQMVIKSELSTEEDYYDAPVLSPQQTMGEGANGIKMNVNTHQDDGSQHSMDSTAGSAPSLDSEADFSESDLQKIQFAAGLRLKSRALTSNQAVDVPITKVEEAYLERSRALLTMLYSFRCACHNVFYPTVKRLYGHLRATYNWFPIFTCYNCVVTFPTRSPTMKHSGRCSKPYLENSIRLVEETKRTENKIRLYQYCKCTQCEALFAFFEDYCEHIDRDHIDDGPFVCKCSKEFGKIEEYKQHMYLSCYLNYYCDICYKVFETLTDFKVHCETEHDKVEDYVFVSYHAEFKIADTSEIRISRKRKIDQVSQDSQEESGHVEKKFNPSRINPVAKPVSINCEVCSRVFSNAYNLKKHMKTHKRASDIQNGWKNGPSSCEKCGKTFSTYYNMVRHNKTHSENERHLQCALCTDKFRLVSELKDHLISVHGQANVCQECGKQFESTEELDQHRSVHLNIKVYRDSKTHSYRTGSKTRYTCEQCEAAFETEEELGRHMALHLVSIETNGNGDVDDQKDARYSCEDCGRHYVSYKGLWLHNKRHHPERKPTQPSFKCEYCQRVLQTNAAYQMHKQMHERLMRQRNALQVKQPPQSSRRKDDEDDDYFTCKHCFKVFSTKYNLKTHLKTHGINVAPGRSFAKNSKNVKTFWCDICHQACQGYQELQRHKQEHINENLGETDSVEDDMDVKPQLFNCEICSKVFLTQLAFTRHKLKHQNQQKGLKKSNFVYCKYCKVPFLNMESLNMHMLREHEEANNQRPTKQANQRAVKKYACNLCKKSFDTSGALCSHQGWHKRGPIQKPYKNEKNLREIKTEEAEPSTSYQEMHACRTCGLCFLTDTSLQLHILEAHRNINATIISPRCNICNMEFATSEAYEIHQQLHRENTAAFKCKYCPKTFAKCESVNMHINQVHPQYNEGRFKCHQCNRLFEKQNALTIHLKVHDRQKMTGVVPKEPKQRVYSCSICHTSFEIAKDLRNHIIAKHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00981456; iTF_00137246;
90% Identity: iTF_00981456;
80% Identity: -