Basic Information

Insect: Melinopterus prodromus
Gene Symbol: -
Assembly: GCA_964023965.1
Location: OZ030392.1:48343706-48346513[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 5.4 5.4e+02 3.0 0.4 1 19 98 116 98 117 0.90

2 19 0.015 1.5 11.1 2.4 1 23 203 226 203 226 0.89

3 19 2.6e-07 2.6e-05 26.1 0.8 3 23 291 311 289 311 0.97

4 19 2.1e-05 0.0021 20.0 2.1 2 23 327 348 326 348 0.97

5 19 0.96 96 5.4 0.1 2 23 356 378 355 378 0.94

6 19 0.0017 0.17 14.0 0.2 2 23 383 404 383 404 0.96

7 19 0.0018 0.18 13.9 0.0 1 23 426 448 426 448 0.97

8 19 0.0059 0.59 12.3 3.3 1 23 468 490 468 491 0.95

9 19 0.0086 0.86 11.8 1.0 1 23 501 523 501 523 0.98

10 19 2.7e-06 0.00027 22.9 7.2 1 23 558 580 558 580 0.99

11 19 1.1 1.1e+02 5.2 2.6 3 23 602 622 600 622 0.97

12 19 0.02 2 10.7 1.4 1 23 644 666 644 666 0.97

13 19 0.086 8.6 8.7 0.3 2 23 680 702 679 702 0.96

14 19 0.00024 0.024 16.7 1.1 1 23 722 744 722 744 0.94

15 19 0.79 79 5.6 1.5 1 23 777 800 777 800 0.92

16 19 0.0012 0.12 14.5 0.1 2 23 811 832 811 832 0.97

17 19 0.00042 0.042 16.0 2.5 1 23 839 862 839 862 0.96

18 19 0.00056 0.056 15.5 2.7 1 23 870 892 870 892 0.99

19 19 0.00088 0.089 14.9 0.6 1 23 910 933 910 933 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	5.4	5.4e+02	3.0	0.4	1	19	98	116	98	117	0.90
2	19	0.015	1.5	11.1	2.4	1	23	203	226	203	226	0.89
3	19	2.6e-07	2.6e-05	26.1	0.8	3	23	291	311	289	311	0.97
4	19	2.1e-05	0.0021	20.0	2.1	2	23	327	348	326	348	0.97
5	19	0.96	96	5.4	0.1	2	23	356	378	355	378	0.94
6	19	0.0017	0.17	14.0	0.2	2	23	383	404	383	404	0.96
7	19	0.0018	0.18	13.9	0.0	1	23	426	448	426	448	0.97
8	19	0.0059	0.59	12.3	3.3	1	23	468	490	468	491	0.95
9	19	0.0086	0.86	11.8	1.0	1	23	501	523	501	523	0.98
10	19	2.7e-06	0.00027	22.9	7.2	1	23	558	580	558	580	0.99
11	19	1.1	1.1e+02	5.2	2.6	3	23	602	622	600	622	0.97
12	19	0.02	2	10.7	1.4	1	23	644	666	644	666	0.97
13	19	0.086	8.6	8.7	0.3	2	23	680	702	679	702	0.96
14	19	0.00024	0.024	16.7	1.1	1	23	722	744	722	744	0.94
15	19	0.79	79	5.6	1.5	1	23	777	800	777	800	0.92
16	19	0.0012	0.12	14.5	0.1	2	23	811	832	811	832	0.97
17	19	0.00042	0.042	16.0	2.5	1	23	839	862	839	862	0.96
18	19	0.00056	0.056	15.5	2.7	1	23	870	892	870	892	0.99
19	19	0.00088	0.089	14.9	0.6	1	23	910	933	910	933	0.94

Sequence Information

Coding Sequence: ATGGACAGTACTGCAGGCTCTGCTCCAAGCTTGGATTCCGAAGCAGATTTTTCGGAAAGTGACCTACAAAAGATTCAATTTGCCGCTGGGTTGCGATTAAAATCCAGAACCCTTACATCCAACCAGGCTGTAGATGTGCCCATAACAAAAGTAGAAGAAGCGTACCTGGAACGTAGTAGGGCTCTATTGACTATGCTGTATTCGTTCAGGTGTGCCTGCCACAATGTGTTCTACCCAACAGTCAAACGTCTCTATGGTCACCTTCGAGCTACTTACAACTGGTTCCCGATATTCACTTGTTACAATTGCGTTGTGACATTTCCAACGCGGTCCCCAACGATGAAACATAGTGGTAGATGTTCGAAACCTTACTTGGAGAATAGCATCAGACTTGTAGAAGAAACCAAGCGaactgaaaacaaaataaggtTATACCAATATTGCAAATGCACACAATGCGAGGCTTTATTTGCTTTCTTCGAAGACTACTGTGAGCACATTGATAGAGACCACATCGATGATGGCCCATTTGTTTGCAAATGCTCGAAagaatttggaaaaattgaGGAATACAAGCAACACATGTACTTATCCTGCTATCTAAACTACTATTGTGACATCTGTTACAAAGTTTTTGAGACTTTGACCGACTTCAAAGTGCACTGCGAGACTGAGCACGACAAAGTCGAAGATTACGTCTTCGTCTCCTACCACGCAGAATTTAAGATTGCCGATACGTCTGAAATTAGAATTTCAAGAAAGCGAAAGATCGACCAGGTGTCTCAAGATTCGCAGGAAGAAAGTGTGCATGTAGAGAAGAAATTCAACCCGAGTCGAATAAACCCCGTTGCTAAACCAGTCTCAATCAATTGTGAAGTTTGTAACCGTGTCTTCAACAATGCTTACAACCTTAAGAAGCACATGAAGACACACAAGCGTGCCAGCGACATACAAAATGGCTGGAAGAATGGTCCATCCTCTTGTGACAAGTGCGGAAAGACCTTCTCGACTTACTACAACATGGTCAGGCACAATAAGACGCATAGTGAGAACGAACGACATCTCCAGTGCGCACTTTGTACGGACAAATTTAGATTGGTTTCAGAGCTGAAAGATCACCTTATTTCGGTCCACGGCCAAGCGAATGTATGTCAAGAATGTGGTAAACAATTTGAATCGACTGAGGAACTTGATCAGCACAGGAGCGTGCATCTAAACATTAAAGTTTATCGCGATTCAAAAACGCATTCTTACCGTACTGGATCGAAGACAAGGTACACCTGCGAGCAATGCGAAGCAGCTTTTGAAACCGAGGAAGAATTGGGCCGACATATGGCTTTACATTTGGTTAGTATCGAGACAAACGGTAATGGGGATATTGATGACCAGAAGGACGCACGGTATTCATGCGAGGACTGCGGAAGGCATTACGTCAGTTACAAAGGTTTATGGTTGCACAATAAACGTCACCACCCTGAGAGGAAACCCGCCCAACCGTCGTTCAAATGCGAATATTGTCAACGGGTTTTGCAAACAAACGCTGCTTATCAAATGCATAAGCAGATGCATGAGCGCTTGATGAGACAAGGCAATGTGAAACAAGGCAATGCTTTGCAAGTAAAACAGCCTCCCCAGAGTTCCCGTAGGAAGGACGATGAGGATGATGACTATTTCACGTGCAAACACTGTTTCAAAGTATTCTCAACAAAATATAATCTGAAAACGCATTTGAAGACGCATGGGATTAACGTTGCACCGGGGAGATCGTTCgctaaaaacagtaaaaatgtGAAGACATTTTGGTGTGATATATGCCATCAAGCTTGCCAAGGTTACCAAGAACTTCAGAGACATAAGCAAGAGCACATCAATGAGAATCTCGGGGAAACGGATAGCGTGGAAGATGATATGGATGTAAAGCCCCAACTCTTCAATTGTGAGATTTGTTCGAAAGTGTTCTTGACGCAGCTGGCATTTACCAGACATAAGCTGAAGCACCAAAATCAACAGAAAGGTTTGAAGAAGACTAACTTTGTGTACTGCAAGTATTGCAAGGTCCCATTCTTGAATATGGAATCTTTGAATATGCATATGCTTCGCGAGCATGAAGAAGCTAATAATCAAAGGCCGACAAAGCAAGCTAATCCAAGGGCTGCTAAGAAATATGCTTGCAACTTGTGCAAGAAGTCGTTTGATACTTCTGGGGCTTTATGTTCACATCAAGGGTGGCATAAGAGAGGACCAATACAAAAGCCGTATAAAAATGAAAAGAACTTGAGGGAGATAAAGATGGAGGAAGCAGAGCCATCTACCAGTTACCAAGAAATGCATGCATGCCGCACTTGCGGGTTGTGCTTCTTGACGGACACTTCATTGCAGCTTCATATTTTGGAAGCGCATAGGAATATAAATGCAACAATTATCTCCCCAAGATGCAATATTTGTAATATGGAATTTGCTACATCCGAAGCCTATGAAATTCACCAACAGCTTCATAGAGAAAACACTGCTgcatttaaatgtaaatattgtccGAAAACATTTGCAAAATGTGAATCGGTTAATATGCATATCAATCAAGTTCACCCGCAATACAACGAAGGCAGATTTAAATGCCACCAATGCAACAGGCTGTTTGAAAAGCAGAACGCCTTGACCATACATTTGAAAGTCCACGATCGGCAGAAGATGACAGGTGTAGTACCCAAAGAGCCAAAGCAAAGGGTGTACTCATGCTCGATCTGCCACACCAGCTTCGAAATAGCCAAAGATTTGAGAAATCACATAATTGCAAAGCACCCGTTTTAA
Protein Sequence: MDSTAGSAPSLDSEADFSESDLQKIQFAAGLRLKSRTLTSNQAVDVPITKVEEAYLERSRALLTMLYSFRCACHNVFYPTVKRLYGHLRATYNWFPIFTCYNCVVTFPTRSPTMKHSGRCSKPYLENSIRLVEETKRTENKIRLYQYCKCTQCEALFAFFEDYCEHIDRDHIDDGPFVCKCSKEFGKIEEYKQHMYLSCYLNYYCDICYKVFETLTDFKVHCETEHDKVEDYVFVSYHAEFKIADTSEIRISRKRKIDQVSQDSQEESVHVEKKFNPSRINPVAKPVSINCEVCNRVFNNAYNLKKHMKTHKRASDIQNGWKNGPSSCDKCGKTFSTYYNMVRHNKTHSENERHLQCALCTDKFRLVSELKDHLISVHGQANVCQECGKQFESTEELDQHRSVHLNIKVYRDSKTHSYRTGSKTRYTCEQCEAAFETEEELGRHMALHLVSIETNGNGDIDDQKDARYSCEDCGRHYVSYKGLWLHNKRHHPERKPAQPSFKCEYCQRVLQTNAAYQMHKQMHERLMRQGNVKQGNALQVKQPPQSSRRKDDEDDDYFTCKHCFKVFSTKYNLKTHLKTHGINVAPGRSFAKNSKNVKTFWCDICHQACQGYQELQRHKQEHINENLGETDSVEDDMDVKPQLFNCEICSKVFLTQLAFTRHKLKHQNQQKGLKKTNFVYCKYCKVPFLNMESLNMHMLREHEEANNQRPTKQANPRAAKKYACNLCKKSFDTSGALCSHQGWHKRGPIQKPYKNEKNLREIKMEEAEPSTSYQEMHACRTCGLCFLTDTSLQLHILEAHRNINATIISPRCNICNMEFATSEAYEIHQQLHRENTAAFKCKYCPKTFAKCESVNMHINQVHPQYNEGRFKCHQCNRLFEKQNALTIHLKVHDRQKMTGVVPKEPKQRVYSCSICHTSFEIAKDLRNHIIAKHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00138362;
90% Identity: iTF_00138362;
80% Identity: -