Asti035359.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphodius sticticus
Gene Symbol
TFIP11
Assembly
GCA_963966075.1
Location
OZ014512.1:26938191-26942528[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4e-95 6.7e-91 306.1 8.8 1 275 398 669 398 669 0.97
2 2 0.087 1.4e+03 0.0 0.1 242 270 681 709 674 720 0.61

Sequence Information

Coding Sequence
ATGTCGGAAGACGAAGTGGAAAAGTTCGAGATAACAGATTACGATTTAGAGAATGAATTCAACATCAATAGACCGCGTAGAAGGCAGACCAAACATCAACAAACTTATGGCATATGGGCGGATGATAGTGATGATGAACCTGATACCAGACCTTCTTTTAAATCTCACAAAGCTGCAAAAAATTATTCAGCCCCCATAGGTTTTGTCGCTGGTGGCGTTCAACAATCGGGGAAGAAAAAAGAGGTTGAGGACAAGAAAAAGGATGAAATATCTGACGAAGATGAGGCTGGGACTTCGTATCAAGTTAAAAACAGTTCTAGCGAGTCTGAAGATGAAGCCCTACCACGTAGAGGTTTTGGTGCACCACGAGGTCCTGTACAATCCACCGTAACTGAAATCACAGGGGACATTGCTGGTTTGCGCAATAAGCAATCAGCAAAAGTCAGCACAAGTTTGATGAATAGAGGCGTAGGAAATTGGGAGAAACATACGAAAGGCATCGGGGCAAAACTCTTGCTTCAGATGGGTTTTAAACCGGGTAAAGGTCTCGGAAAGGATTTGCAAGGTATTTCCGCACCTGTGGAGGCCCATTTGAGGAAAGGTCGCGGAGCTATAGGGGCTTACGGACCAGAAAAAAAGACTAGCATTCCTGTACTAAAAggtGTTGATAAGGAAGAAGATGATCGGGCAGAATCGGAAACAAAATGGAAGAAGAATGATATCGGGACCAGCAAGAAAACGAGATACTACTATAAGAGCGTAGACGATGTAATTGAAAAAGGTAAACGTCCTGGAGCTAATAGAAATTTGGGACCAGCAAGTGAGCTGTCTAAAGTTAAAGTTATTGATATGACCGGACCCCAGCAGAGAGTGTTAAGCGGATATCATGCACTGAGTGGACTAAAAGCGCCCCCTGGTGTCGAGAGATACGAAGATGTCGTACACAAGAAATGCACAAATTTTGCCTTACCTGAGATGCAGCATAATCTCGATTTATTAGTAGATATGTGTGAACAGgaTATTATTAGGATTGACAGAAGTTCACGTTATAACCAAGATACCTTACAGCATTTAAAACAAGATGAAGTCAATTTGAAATCGACTATTCTAAAAGAAGAAAAAGTTGTAGATACGTTGAGTTCCCTTCTCAAAATTGTCAATAAATTGATGGATTCAACATTAGGCCTATCGTTAGGACAAGTGGCCGGTATTTTTAAGCAGTTACAGGAGGATTACTTGGAGGAATACTGCCAATACGGCCTAGGAGAATTAGCTCCCGGTTTAGTAGGACCCTTACTAACTTCCGGTTTGGCGAGTTGGCAACCGTTAGCCTACCCGAAACAGTACATGGACCTCTTCAGCCAATGGAAGGACATCCTGGAGAAGCCGTTGCAGCGTGGGACCGTTGAAGGTAATTGTATGGGGATTCAGCCATTTGATAGTCTCTTATGGCACACTTGGGTCCCCGTTGTCAGATCGTGCATTAGTTCTTGGAAGCCGAGGGATTGTGATCCGATGATCTTCCTTCTCGAGGCTTGGAAGCCGCTTCTAGCACCCTGGCTCCTCGATAATATTCTCGAGCAGGACGTCATCCCGAAATTGTTGAAGGAGGTTCAAGGATGGGACCCATTGACGGATACCATTCCTATTCACACCTGGGTACACCCCTGGATACCGTTGttagATACAAAACTTCAAGTGAGCATTTATCCGATTATTCAAGAGAAATTGGGAATCTGCCTTACAAATTGGCATCCTTCGGATAGGTCGGCCAAACCCATGTTGAAACCGTGGCAACGTGTCTTACCAGAGGGTGCTTTTGTCGCGTTCTTATTGAAACATATCGTGCCTAAATTGCAACACTGCATGCAGAATCTTGTCATTAATCCACACCAACAACCGCTGGaaCCATGGCACTGGGTGATGGATTGGAGCGATATGTTATCAATCGGAAATATGACATtaattcttgacaaatatttctTCCCTCGCTGGCTGCAAACGCTCGGTATGTGGCTCAACCATAATCCGGATTTCACCCAAGTAACCGAGTGGTTTATCGGATGGAAACGAATGATGTCAGAACAACTGCTAGCGCAGCCAACCATAAACGATAACTTCCAGAAAGCTTTAGAAATAATGAACAGGGCGGCATCTGCAGGTCATCAACCGGGGGCGAAGGAATCCGTATCATACCTCACAAACATCGAAAATAACTTCCCAACTCCGCCCCCTCCACCAAGGATAGACTCTTTTGCCGAAGCTGTTCGAACGGCAAGTCAGATTCCGGAAGGCGTCAGAGACCTAGTGGCAAAACGTTGCGAAGAAAGGGGTATATTATTCGTCCCAATCCCCAACAAATATTACGAAGCAAAGCAGGTTTATAGGTTAGGTTCTCGCGGGGCCCAATGTTACATAGATCGGAACGTCTTATTCTACTCGCAAAATAATACCTCATGGTTACCAACTTCTTTGAGCAGACTGCTTGATATGGCGTAA
Protein Sequence
MSEDEVEKFEITDYDLENEFNINRPRRRQTKHQQTYGIWADDSDDEPDTRPSFKSHKAAKNYSAPIGFVAGGVQQSGKKKEVEDKKKDEISDEDEAGTSYQVKNSSSESEDEALPRRGFGAPRGPVQSTVTEITGDIAGLRNKQSAKVSTSLMNRGVGNWEKHTKGIGAKLLLQMGFKPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKKTSIPVLKGVDKEEDDRAESETKWKKNDIGTSKKTRYYYKSVDDVIEKGKRPGANRNLGPASELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVERYEDVVHKKCTNFALPEMQHNLDLLVDMCEQDIIRIDRSSRYNQDTLQHLKQDEVNLKSTILKEEKVVDTLSSLLKIVNKLMDSTLGLSLGQVAGIFKQLQEDYLEEYCQYGLGELAPGLVGPLLTSGLASWQPLAYPKQYMDLFSQWKDILEKPLQRGTVEGNCMGIQPFDSLLWHTWVPVVRSCISSWKPRDCDPMIFLLEAWKPLLAPWLLDNILEQDVIPKLLKEVQGWDPLTDTIPIHTWVHPWIPLLDTKLQVSIYPIIQEKLGICLTNWHPSDRSAKPMLKPWQRVLPEGAFVAFLLKHIVPKLQHCMQNLVINPHQQPLEPWHWVMDWSDMLSIGNMTLILDKYFFPRWLQTLGMWLNHNPDFTQVTEWFIGWKRMMSEQLLAQPTINDNFQKALEIMNRAASAGHQPGAKESVSYLTNIENNFPTPPPPPRIDSFAEAVRTASQIPEGVRDLVAKRCEERGILFVPIPNKYYEAKQVYRLGSRGAQCYIDRNVLFYSQNNTSWLPTSLSRLLDMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01097457;
90% Identity
iTF_00981005; iTF_00136871;
80% Identity
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