Agos009434.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphis gossypii
Gene Symbol
TFIP11
Assembly
GCA_004010815.1
Location
NW:120772-125064[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-78 1.7e-74 250.4 18.8 3 275 386 652 384 652 0.97
2 2 0.17 1e+03 -1.5 0.1 234 260 656 682 653 695 0.63

Sequence Information

Coding Sequence
ATGTCTGACGATGAAATGGAAAAATTCGAAATTACCGATTTTGATTTGgacaatgaatttaatatgaacAGACCCCAAAGAAGATTGACAAAAAATCAAGCAATTTACGGAATTTGGGCAGATGAAGAAGGTAATGATAGTGACGATGAACCTTCAGGTTTTGGAGGCCGTAGaaagaataaagataaaaaatataaacaaaactatacTGCTCCTGTTTCATTTGTGGCTGGGGGAGTTCAGCAGGCtggcaaagaaaaaaaagaaattaaaactgaAGAAAATAAAGACAATGAACCTCACAATTTGGAAGATAATATATCCGCATCcagtgatGAAGAAAAACCAGcatttagttttgatattgatCAAGAATTGGCAGGATTACGAAAGAAACGATCACAAGTAAATTCAAGTCTAATGAACAAAGGATTAGGAGATTGGGAAAAACATACTAAAGGAATTGGTGCAAAATTGTTGCTTGGaatGGGTTACCAACCAGGTCATGGTTTAGGAAAAAAACTTCAAGGTATTCTGGCTCCAATTGAAGCAAACTTAAGAAAAGGAAGAGGAGCAATTgGTGCATATGGTCCTGAGTCTAAGACCAAACCAATGAAAGTAGATGGAGAAAAAGCAGCAGATAAGACAAAAGATAACAAAGTTCTAGTTAGTGGTTGGAGAAAAGCACTTAAAGCTGAAAAaactcaatatatttataaaacagctGAAGAAGTGATTGAAGAAAGTAAACAACCAGGGCAAAGAAAACGAGAattcaatgAACTAAGTAGAGTAAAAGTAATTGATATGACTGGTCCTGAACAGAGAATTTTATCTGGATATCATGCTATATCTGGTGTAAAAAAACCAACAGATCAGTGGGAAATacgaaaagataaaaaatactcaaatttTGATCTACCCGAGTTATTACACAATCTCAACCTATTAGTTGAAATAGCTGAACAAaatataattactaataatcaaGAACTTTGTACTTCGGAAGATCGACTTATTGTCATTGAACAAGAAACTACAAAATTAGGAGAaagtattaatgaaaaaaataaatcaattgaatctcttgaaaaaatgataattgttaTGGAATCTTTAAAtgatgcattaaaaaaaaatatgttagataGTAACCAAGCTATAAAACGTTTAACAGAAATGAAAGAAAATTACTACCCAGATTATCGTCTTAATGGTGGATCAGTCTTTGCTTTATCAATTTctcaaatattgataaaagaaATGCTATCTACATGGAATCCATTACAAGATCCAACAATGCCTTTCGTAGAACTCAAAAAATGGAAAGAACTATTAACATTAGATGAGCCATGTGCTGTTGGTTTTCAATCAAGTGATgaatttcaaacattaatttGGCAAGAATGGGTACCTCAAGTTCAAAAAGCATGCGGgcaATGGAAATGTCGAGATTATAACAGTATGTTGAAACTTGTTGAACAATCAGCTGAATTGATACCAAttgacataattaataaagttcttgaaaatatgattttacctAAAATACAGTCGGAAGTAGAACAATGGGATCCGTTAACTGATATTGTACCAATCCATTTATGGATTCACCCATGGTTGCCTTATTTAAGTAAACATTTCGAAACAATAGTTTATCCAACACTAAGACAAAAATTAAGTGTAGCATTAAATGCCTGGCATCCATCTGACAGTTCTGCTAAGCTGATGCTCCAACCATGgataaatgtttttcaacAAGGCTACATGGAAgcttttctaataaaaaatattgttcctAAATTACAAGCGGCTCTACACGCTTTTGTAATCAACCCACATCACCAACAATTggacAATTGGAATTGGGTTAATGCATGGTCAGATGTATTACCATTGCCTACATTAGTGGAATTGTTGGACCAACATTTCTTTCCTAAGTGGCTTAAAACACTTACTATGTGGATAAATATGAATCCTAATCACGAACAAATAAGTAATTGGTATACAGGATGGAAGTCTTTAATGCCTCCTGTTATTGTTGAACATCCAACCATTAAAGGGAGATTTCATTCAGCTTTGGATATAATGAGCCGAGCAGTTGGAGGACCTTCTATGCCACAACCACCTCCACCACCAACAATTcacggTGGTCTAGCTGAAGCTGTACGTACTGCATCACAAATGCCACATGGCTTTAAAGAATTAGTACATAAACGTTGTGAGGAACGAGGTATTTTATGGATGCCTATGTCTGGTCGTTTTAGAGAAGCCAAACAAGTATATAGATGTGGAGCAAGACTTCAAGCATTTATTGACCGTGGAGTTTTATTTGTTAGCCAAGATGGAACAAATTTTGCTCCAATGTCTGTACAGTCCATGTTAGAATTAtgtgaataa
Protein Sequence
MSDDEMEKFEITDFDLDNEFNMNRPQRRLTKNQAIYGIWADEEGNDSDDEPSGFGGRRKNKDKKYKQNYTAPVSFVAGGVQQAGKEKKEIKTEENKDNEPHNLEDNISASSDEEKPAFSFDIDQELAGLRKKRSQVNSSLMNKGLGDWEKHTKGIGAKLLLGMGYQPGHGLGKKLQGILAPIEANLRKGRGAIGAYGPESKTKPMKVDGEKAADKTKDNKVLVSGWRKALKAEKTQYIYKTAEEVIEESKQPGQRKREFNELSRVKVIDMTGPEQRILSGYHAISGVKKPTDQWEIRKDKKYSNFDLPELLHNLNLLVEIAEQNIITNNQELCTSEDRLIVIEQETTKLGESINEKNKSIESLEKMIIVMESLNDALKKNMLDSNQAIKRLTEMKENYYPDYRLNGGSVFALSISQILIKEMLSTWNPLQDPTMPFVELKKWKELLTLDEPCAVGFQSSDEFQTLIWQEWVPQVQKACGQWKCRDYNSMLKLVEQSAELIPIDIINKVLENMILPKIQSEVEQWDPLTDIVPIHLWIHPWLPYLSKHFETIVYPTLRQKLSVALNAWHPSDSSAKLMLQPWINVFQQGYMEAFLIKNIVPKLQAALHAFVINPHHQQLDNWNWVNAWSDVLPLPTLVELLDQHFFPKWLKTLTMWINMNPNHEQISNWYTGWKSLMPPVIVEHPTIKGRFHSALDIMSRAVGGPSMPQPPPPPTIHGGLAEAVRTASQMPHGFKELVHKRCEERGILWMPMSGRFREAKQVYRCGARLQAFIDRGVLFVSQDGTNFAPMSVQSMLELCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01037788;
90% Identity
iTF_00184574;
80% Identity
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