Agos001499.1
Basic Information
- Insect
- Aphis gossypii
- Gene Symbol
- JARID2_1
- Assembly
- GCA_004010815.1
- Location
- NW:218098-232448[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.8 1.2e+04 -3.8 0.0 12 41 128 159 126 163 0.82 2 4 2.8 5.1e+03 -2.5 0.0 21 67 970 1016 961 1027 0.73 3 4 1.5e-20 2.7e-17 62.4 0.0 8 89 1529 1608 1523 1608 0.92 4 4 5.4 9.6e+03 -3.4 0.0 49 62 1622 1633 1619 1642 0.75
Sequence Information
- Coding Sequence
- ATGTCTTCGAATGGGTCGGATGCAAAGAAACGCAAACTGCTGAACAATGAAGAAGCTATTCTTGAGTCGAGTACTAAAaaAATCAAGGTACAAGCACAGCGTAAATTTGCCCAAAATGCTGTTTTACCCACCAGCACTGCACAAAAACCTATTCAAACTCCAGTGGTGCCTAATAATGTGACAAAACCGCCAATTAAACGGCCAAATACTGAAGACTTTCTTACCTTTCTTTGTTTTAgagGTACTAGTTTATTACCTCCACGACTAGATTTCTTCAATAAACCTCAACGCTCTCTATCGGCACAAGAGATTGCTGCtggaaaaaaaAGAAGAAAAAGCACTCCTATACTGCCAGTAACTAATGCAAATAATCCCTATCATGTACATAGTGTAAATAATGAACCAATTGAACGTAAAAACATTAGTCAGTTATCACAAACCAAGTTTCCATTATCTAAACTAGGACAGAAAGttaTGGGTCGAAAGTTGGTAAGATCCAGTTCAAGGTATACTGTTAGACAAGAATCTCTTACATTACGTCAATTAGCCCTTCGTCAtgttccaaaaataaaaaaacccaCCTCAAAAGTTATTAAacCTTTacctaaagaaaatattaaaaaaaaaccagagAAAAATGGAAAGCAAGTATCACTAGACGGTAAGCAAATACAAAAGTTGAAAGGCCGTATAACCCGATCAAATTCTTTACCAAGTATATTTTGTCCTGCGGTAAATCAACTTCGagatgataAAGGAAAATGGTGTAAAGGGAATAGTAGTAAATCTTCTTCAAAAGCATCTGATGATTCAAAAGATGTTGAAGAAGAAAGACCATCGAGAAAAAAGACTGCATCAAACAATTTAGATCATAGAAGTAATAGTCTGGGTAATATGAAACGAAAGACTAGTATTGTTAAATGTAAAGtggcaaataaaaataacagaaaaacTAGAAGTTTAGCAAGTAAATCTAAGAGCAGCGACCAAGATAATTATGTTGTTCTTGATAAGAAGGGTGATAAAAATTTGAAGACTGTATTGAAgagtaataaaacaaacagtTTAATTGAAACAAAACCAACAGTAGACGTGAAAAGAAGAACATCTTCGGtagataatatgaaaacaacTCGCGAGAGCAAAGATATAATTAAttCAACCCGTTCAAGGCCCCCTAGAAGAACTAAAGAAGCTGCTACTCTATTTATGGAAATGTTACGAAAAGACATGCGGTGCCCTGATGAGCAAGAAGAAGATGATACATCATCTGTTGAGAGTTTTCCGGAGCTTCCTAATACACGAATAAATGAACAACGTGAACGTGAGTTGAAAGTGTTTTCCAAGCAAAACAAAATGGAAAAACATCTAGAAGAACAAAAGTTATCTGAAAAAAAAGATGATAAACCATTGTCTGATAGcaaaaagacaaaaataattgacaaaaaGAAGGTagaaaagttgaaaaaaaaaattgaggtgAATAATACTCATGATAAGAAAAAGACAAAAGAAGTTAGTGAGTCGATTAGCTTAATTGAAAACAGTGGAACAGCATCGTTTAAAAGGAATCTGAGGCCTCGACGCTCTTCTACCATGTTAGATGATTATATCATGACTGATTCGGATGAGGACGACATGAAATGTAAACCTGTTATAGAGTTGACAAAATGTGAAGCTCCTATACCGTCgaacaaatttacaattgaGGCCGGAAACTCAAAATCTCAAAAGTGTAAGTTAAGTACTGACGaatctgttaaaaaaaatcttaaaactaataagactgacttaaaactgaaaaaagaTTTGAATAAAGATTCCGAAGTTAAAAAAAGTCTTTCTGAAACTAAgtcaaaaagtattttaataaaacgtgaCAAAGAGCTAGAAatcaagaataataaaaatgctgctgtcgataaaaaaaatgaaaaatcgtCAAAAAATAAGACTGAAATTGTAGTAATTACTAAAGAACCAAAAACTACCGGCAATGGTTCAAAAAATGCCGGAAAAAAAGTGCCACCGCCTAAGCAGCagttaacaaaaaatgaaaacgctTTGAACAAGAAAAAGTCTAATttagatttgtataataataacaataaaaaaaaacggtcaTCGTCAGTGACGTCTTCGTCGTCTTCCATGTTTAGTGGTATTACTAGTCAGACAAAAGAAGAGCTTTTGGAACGTATGGCCAAAAATTTTGATGCCACGCCTACCGCTTATGGGGGTGCCGATAAAGTAATATTGACAACAATAGCGGAAAACATCAAAAGCACAACTACGAAAAAATATacgcaaaataatacaaaggaAAAATGTGTTGAAAGCAATGtggtagaaaaaaatgtagagaGTGGTAGTATCgtggtagaaaaaaaaacagctaaCGAAGGGCattcagtaaataataaattggtaaaaaacaaacaagaaCTAGAAAAAGTTTCGAAAACAGAAAGCATAGTTGCAGTGCCAAAAGAAGAAAACGTCATCGTGACTGCTGAAAAAGTAGAAAACGTGGATAAAGCCATCGATACGGCAGAGAAAACTGAGTCCACGGTAGTGCCATTAAATAAAGTAGAAAAAGTGGAAAATATGGTGTTCCAAACCATAGCTAAAGACCTATTCTTGGGACAGCAGAAAGAGATCAAGATCACCATACCTGAATACTTCTCCGGTAAAAATTTCCAGTTGGACAATAGGTTTAAAGAAGATGATGGGCTTTCTGTGTTATCCGAGATTTGTAGTGCCTTGCCCAGATTTAATGAACCTTTCGTATCTAGTAGTCAGTTATTGAATAAGCTGCCAGCACCCGAGGACAGCAGTTTCGTGAAGTACGTTCCTCCAACTGTCGGTGAAGATGAAAAGAAAGACGAAAAGCCACCGGTGTCGACATCAACGCCGCCGTCATTTGAAAGCCGCACCGTCAAAATCGTTAATTTGGCGCGCGGCAACAGCTCGTCTGAGACAAACGACAAAAATGATTTAGCTGCATCTTGGAAACGGGCGttcaaaaatgtcaaattgCCCAAAAATGGAATCACCTCTGCCGCTGTTTCGGTCGGTAGCAACTTGATTGCTTGgacaaaaaagaaacaaaacgACAATCAAGCACCACCATCAAAGACATACGCTGATGCTGTAGATGGTGGcacaaaagaaataatttccaATAGTAATTCGATGAAAAATACTCTCCAGTCATCACTGGTAAATGGTACCGCGGAAAAGAAATCTGAATCTTCATATAACTGCCAAAAGACTTGTTGCGGCGAAACTAAATCCATGGAAATGTTGGACGGCAAAAAGACGGTGTCAATATCGGCCGCTAACAATGCGGCCTATCTGGCCAAAACGACTATACTTAACAGTACGAAGTAcgatttgaaatttgaaaaacgtTCTTCCTCGGTTACAACAGCGACCACTGCAGCGCCTATCAGTGTAGAAAAACAACATCAAATTCGCAAAGACGTCATGGGTGACGTGTCGTCTTCTGATGATCAGAGTCCAGAAAAGAAGATATTCCATCAGCGGCGGTTATCTACCACCCAGTCTTGTAGCGGAAATAGTTCTGATGCTTTTTCACCCGATAACGAGACGAGTGTTTACGCTTTTCAGCCTGATTTGCCAGTAGCCAGCACTCCTTTTCGTCGGAATAAACCACAATCGCCTGCCAAGTCCAGGACGGTTTCGCCCAACACATCAATCGCTGTGAGTATTGAAAATGATTCTATGGAAGAAAAATCTCATCAGTCCACCGTGTCATCAACTACAACAGATGTTGATAGCGAGGAAGGACGGCTTTTTTACATTCCGTTACCAGCCGGAGTTCGGGCACAGCCGATGATTCAAGGCGTGACAGTCAAGCTGGGTACAGAAGGACCACagaaaaaattagtaatgaGCGCTAAGCTGGTAACCAAACCCCCTGCATCTACGATACCAGTCAGtTCCATATCACCAAAACCTGAGCGGAAAATCAAACCGCTGTGCACGACCAAAATTACCAACAGCACCACCCCTGTCGGCACTGTGCAACCAACTACTAGAACTGTTCAGCCCCCAAAATGTACCCCCTCAACTTCAAAACAAGCGTTACCATTACCTCCGCAGCCGCAAATCTCGGAAACGAAAGACGATAAGAAACGGTTACAACAAATCACTACAACTACTAATTCTACTACTACTGCCATTACTTCTGCTAAGGAATCGAAAAAATCGTCCTCCGTTTCCGCTGCTAACAAcaagaaacaaaaaaaGACTGAAAAACAAGTTAACAATAAGAGGAAGTCCAGCGAGAAAGTTGCTTTGAAAAAGAAATCAGCAAAAGAATGTTCTGACATGTTGGATGCTCCGACGTTTTATCCATCCGAAGAAGACTTTAAGGATCctttagaatattttgaaatcataAAACCCGTTGCTCAAAAATACGGTATATGCAGAGTCGTGCCACCACCTAGTTTTAAgCCGGAATGCAAAGTCAGCGACGACATGCGTTTCACGGCATACAACCAGTATGTGCATAAGATGATGAATCGATGGGGTCCAAATGTTCGCGAAATGATAGCAATGAAAAAGTATCTAGAAACACAGTCAATAGTCTTGTCCAACCCACCACTGATTGGTGGCATGGAATTGGATTTACCCAAACTATACCATACGGTACAGGAGCTCGGCGGACTTAAAGAAGTAATCGAGCTAGACAAGTGGTGTCGTGTTGCTGACTTGATGAAGATCCCTAAGAGTGCTCAAGACCGCGTCACTAAACTCGACGACATTTACTGCAAATATCTATTGCCGTACGACACACTCTCACATGATGAACGACAAAAATTGATAGCAGAAGTGGATAAAGAGTGGAAACAGATATGCAAAAAAGGCGACACTGATGACGAGCTGTATGAAGATGTCAATGATTGTATAACAAAGGGTCGAAGTATTCCATTGAGCGCTTATTATCGGGTTGCACGCAACACTATTGCCATGTGGTTCAAAGAACAGCAGCAACAGCATCCGTCGGGTGGCCATTCATCTTCAACGTCAGCTGCGGCCCCGGCAGTTGTCCGGGCTGAAGATGTTGAGTCGCTTTATTGGAAAAATGTGCAGGAAAGGAAGAATCACATTTGTGTGCTGTCTGGGTCAATTGACTCGGGTGCAGAGGGTTATGGATTTCCAACGACCAAGACAGCCACTTTCACTAAACATCCGTGGAATCTTAAGGTGCTGACTAACAATCCGGTATCTGTGCTCAAGTCTCTGGGCCCGGTGATGGGCATGACTGTACCCACTATACACATGGGCATGGTATTCTCAGCGTGCTGTTGGTACAAGGACCCTCACGGACTGCCATGGATCGAGTATCTACATACCGGTGCCGACAAGGTGTGGTATGGCGTGCCGTCTGACCAAAGTGATCGGTTTCGAGCAGCCATGAAGCGCTTGCTGCCGCGGGCTGTAGCTGAAGGTCAAAATCATCACTCATGGTTGGCTGCAGACAGTGGTATGGTGCCACCTAGCCGTTTGCTCGAGCATGGTGTCACGCTTACCAGAACCGTGCAGAACCCAGGCCAATTTCTTATTGTCATGCCGCGAGCTTATACGTGCAATGTGTCCACTGGTTATGTTATATCCGAGAGTGTATACTTCACACAGCCTGGTTGGCTTGATGGTGCCGAGAAGATTTTccagGACCTACAGAAAAATTGTGAACCAGCCGCCTTTTCGTTTGAAAAGTTATTGATTAACATGTCCACGGATTCACGTACACctcaaaatatactaaaacagTTACTAAATATGTTAAGCAATATGAGAGACTGTGAAGTGGCGCTCCGTAGTCAACTGGTAGAGGATTTAGGCCTAAAGGCTTCTGAACGCATTAAGCCTACAACGTCCAAATCAAACGAGCATAATGATGATTATGAGTGTGATGTGTGTCATTCAATTCTTTACATATCAATGGTAAACAATTCGCATGAAGACTGTGACTATTGTCTTAGACATGGCATTGAGATTTTATCGAAAAAACATAACCAACTTAAGTATTGCAAGTTTTTATACACTTTTGACGAGactGATTTGGATATGATATTAGTGAAACTTCGTGAAAGGattgattcaaaaaaaaagaaaacatcgACCAAAAGTTGA
- Protein Sequence
- MSSNGSDAKKRKLLNNEEAILESSTKKIKVQAQRKFAQNAVLPTSTAQKPIQTPVVPNNVTKPPIKRPNTEDFLTFLCFRGTSLLPPRLDFFNKPQRSLSAQEIAAGKKRRKSTPILPVTNANNPYHVHSVNNEPIERKNISQLSQTKFPLSKLGQKVMGRKLVRSSSRYTVRQESLTLRQLALRHVPKIKKPTSKVIKPLPKENIKKKPEKNGKQVSLDGKQIQKLKGRITRSNSLPSIFCPAVNQLRDDKGKWCKGNSSKSSSKASDDSKDVEEERPSRKKTASNNLDHRSNSLGNMKRKTSIVKCKVANKNNRKTRSLASKSKSSDQDNYVVLDKKGDKNLKTVLKSNKTNSLIETKPTVDVKRRTSSVDNMKTTRESKDIINSTRSRPPRRTKEAATLFMEMLRKDMRCPDEQEEDDTSSVESFPELPNTRINEQRERELKVFSKQNKMEKHLEEQKLSEKKDDKPLSDSKKTKIIDKKKVEKLKKKIEVNNTHDKKKTKEVSESISLIENSGTASFKRNLRPRRSSTMLDDYIMTDSDEDDMKCKPVIELTKCEAPIPSNKFTIEAGNSKSQKCKLSTDESVKKNLKTNKTDLKLKKDLNKDSEVKKSLSETKSKSILIKRDKELEIKNNKNAAVDKKNEKSSKNKTEIVVITKEPKTTGNGSKNAGKKVPPPKQQLTKNENALNKKKSNLDLYNNNNKKKRSSSVTSSSSSMFSGITSQTKEELLERMAKNFDATPTAYGGADKVILTTIAENIKSTTTKKYTQNNTKEKCVESNVVEKNVESGSIVVEKKTANEGHSVNNKLVKNKQELEKVSKTESIVAVPKEENVIVTAEKVENVDKAIDTAEKTESTVVPLNKVEKVENMVFQTIAKDLFLGQQKEIKITIPEYFSGKNFQLDNRFKEDDGLSVLSEICSALPRFNEPFVSSSQLLNKLPAPEDSSFVKYVPPTVGEDEKKDEKPPVSTSTPPSFESRTVKIVNLARGNSSSETNDKNDLAASWKRAFKNVKLPKNGITSAAVSVGSNLIAWTKKKQNDNQAPPSKTYADAVDGGTKEIISNSNSMKNTLQSSLVNGTAEKKSESSYNCQKTCCGETKSMEMLDGKKTVSISAANNAAYLAKTTILNSTKYDLKFEKRSSSVTTATTAAPISVEKQHQIRKDVMGDVSSSDDQSPEKKIFHQRRLSTTQSCSGNSSDAFSPDNETSVYAFQPDLPVASTPFRRNKPQSPAKSRTVSPNTSIAVSIENDSMEEKSHQSTVSSTTTDVDSEEGRLFYIPLPAGVRAQPMIQGVTVKLGTEGPQKKLVMSAKLVTKPPASTIPVSSISPKPERKIKPLCTTKITNSTTPVGTVQPTTRTVQPPKCTPSTSKQALPLPPQPQISETKDDKKRLQQITTTTNSTTTAITSAKESKKSSSVSAANNKKQKKTEKQVNNKRKSSEKVALKKKSAKECSDMLDAPTFYPSEEDFKDPLEYFEIIKPVAQKYGICRVVPPPSFKPECKVSDDMRFTAYNQYVHKMMNRWGPNVREMIAMKKYLETQSIVLSNPPLIGGMELDLPKLYHTVQELGGLKEVIELDKWCRVADLMKIPKSAQDRVTKLDDIYCKYLLPYDTLSHDERQKLIAEVDKEWKQICKKGDTDDELYEDVNDCITKGRSIPLSAYYRVARNTIAMWFKEQQQQHPSGGHSSSTSAAAPAVVRAEDVESLYWKNVQERKNHICVLSGSIDSGAEGYGFPTTKTATFTKHPWNLKVLTNNPVSVLKSLGPVMGMTVPTIHMGMVFSACCWYKDPHGLPWIEYLHTGADKVWYGVPSDQSDRFRAAMKRLLPRAVAEGQNHHSWLAADSGMVPPSRLLEHGVTLTRTVQNPGQFLIVMPRAYTCNVSTGYVISESVYFTQPGWLDGAEKIFQDLQKNCEPAAFSFEKLLINMSTDSRTPQNILKQLLNMLSNMRDCEVALRSQLVEDLGLKASERIKPTTSKSNEHNDDYECDVCHSILYISMVNNSHEDCDYCLRHGIEILSKKHNQLKYCKFLYTFDETDLDMILVKLRERIDSKKKKTSTKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00134026;
- 90% Identity
- iTF_00972837;
- 80% Identity
- -