Agly011123.1
Basic Information
- Insect
- Aphis glycines
- Gene Symbol
- SUB1
- Assembly
- GCA_009928515.1
- Location
- scaffold:164057-166664[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.17 3.2e+03 -2.2 0.6 31 38 98 105 96 107 0.86 2 2 3.9e-29 7.6e-25 86.3 0.3 1 51 119 169 119 170 0.97
Sequence Information
- Coding Sequence
- ATGCAAAACAACGTGGAAATGCGTCTGAACATGACTAAACTCATACGCGGGAAATGCACGCGCGGTATGAAAATTGTACGACCCGCAGGGTTGTCCCGTCGAACGAACAAAAACGCAAAACGAACTCGTATTCTTTTCAGTCGCGTTGACGATTTCTCAGCTGTCCCATTTAACGGTTTAGTTTTTCAACATTATAGAAAACTGACAATGGCGCCTAAGAAGTCTAAACGTAGCGCTTCTGATGACTCTTCCTCCGACTCCGGACCAGATGACAGAAATCCCCCTCCAAAAAAGTCTAAACCTACTGACAAAGGAAGTTCCAATAAAACCAACTCAAATGAAGAAGAGCATTCTTTTGCATTGGATAAGAATCGTTTTGTTAAAGTTAGAGATTTCCGTGGTAAACTTTTCATCGACATCCGTGAATTCTATGAAAAGGATGGACAAATGCTTCCTGGAAAAAAAGGCATATCTTTGAATGTTAGCCAATGGAACAAACTCAGAGAGCAAATTGACGATATTCAGGAATCTGTTGAAAAAATGGGATAA
- Protein Sequence
- MQNNVEMRLNMTKLIRGKCTRGMKIVRPAGLSRRTNKNAKRTRILFSRVDDFSAVPFNGLVFQHYRKLTMAPKKSKRSASDDSSSDSGPDDRNPPPKKSKPTDKGSSNKTNSNEEEHSFALDKNRFVKVRDFRGKLFIDIREFYEKDGQMLPGKKGISLNVSQWNKLREQIDDIQESVEKMG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00134279; iTF_00136137;
- 90% Identity
- iTF_00134279;
- 80% Identity
- -