Acrc023950.1
Basic Information
- Insect
- Aphis craccivora
- Gene Symbol
- Sub1
- Assembly
- GCA_009835225.1
- Location
- VUJU01000084.1:55448-57161[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.14 4.1e+03 -1.9 0.6 31 38 69 76 67 78 0.86 2 2 1.7e-28 5.2e-24 84.2 0.5 1 51 90 140 90 141 0.97
Sequence Information
- Coding Sequence
- ATGTTGAAATTGTCATCACACTTGTGCAATTACAGTGTTCGTATTCTTTTCAATTACGTTGACGATTTCTCAGCTGTCCCATTTAACGGTTtagtttttcaacattttagaaAACTGACAATGGCGCCTAAGAAGTCTAAACGTAGCGCTTCCGATGATTCTTCCTCCGACTCCGGACCAGACGACagAAATCCCCCTCCAAAAAAGTCTAAGCCTACTGATAAAGGAAGTTCCAAACCAACCAACTCAAATGAAGAAGAATATTCTTTTGCATTGGATAGGAATCGTTTTGTTAAAGTTAGAAATTTCCGTGGTAAACTTTTCATCGACATCCGTGAATTCTATGAAAAGAATGGAGAAATGCTTCCtggaaaaaaaggcaTATCTTTGAATATAAACCAATGGAACAAACTCAAAGAGCAAATTGACGATATTCAGGAATCTGTTGAAAAAATGGGATAA
- Protein Sequence
- MLKLSSHLCNYSVRILFNYVDDFSAVPFNGLVFQHFRKLTMAPKKSKRSASDDSSSDSGPDDRNPPPKKSKPTDKGSSKPTNSNEEEYSFALDRNRFVKVRNFRGKLFIDIREFYEKNGEMLPGKKGISLNINQWNKLKEQIDDIQESVEKMG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00135334;
- 90% Identity
- iTF_00136137; iTF_00135334;
- 80% Identity
- -