Agly013462.1
Basic Information
- Insect
- Aphis glycines
- Gene Symbol
- TFIP11
- Assembly
- GCA_009928515.1
- Location
- scaffold:1158902-1163239[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-78 2.2e-74 250.6 18.8 3 275 386 652 384 652 0.97 2 2 0.15 1.5e+03 -1.4 0.1 234 261 656 683 653 694 0.73
Sequence Information
- Coding Sequence
- ATGTCTGACGATGAAATGGAAAAATTCGAAATTACCGATTTTGATTTGGACAATGAATTTAATATGAACAGACCCCAAAGAAGACTGACAAAAAATCAAGCAATTTATGGAATTTGGGCAGATGAAGAAGGTAATGATAGTGACGATGAACCTTCAGGTTTTGGAGGCCGTAGAAAGAATAAAGATAAAAAATATAAACAAAACTATACAGCTCCTGTTTCATTTGTGGCTGGGGGAGTTCAGCAGGCTGGCAAAGAAAAAAAAGAAATTAAAACTGAAGAAAATAAAGACAATGAACCTCACAATTTGGAAGATAATATATCTGCATCCAGTGATGAAGAAAAACCAGCATTTAGTTTTGATATTGATCAAGAATTGGCAGGATTACGAAAGAAACGATCACAAGTAAATTCAAGTCTAATGAACAAAGGATTAGGAGATTGGGAAAAACATACTAAAGGAATTGGTGCAAAATTGTTGCTTGGAATGGGTTACCAACCAGGTCATGGTTTAGGAAAAAAACTTCAAGGTATTCTGGCTCCAATTGAAGCAAACTTAAGAAAAGGAAGAGGAGCAATTGGTGCATATGGTCCTGAGTCTAAGACCAAACCAATGAAAGTAGATGGAGAAAAAGCAGCAGATAAGTCAAAAGATAACAAAGTTCTAGTTAGTGGTTGGAGAAAAGCACTTAAAGCTGAAAAAACTCAATATATTTATAAAACAGCTGAAGAAGTGATTGAAGAAAGTAAACAACCAGGGCAAAGAAAACGAGAATTCAATGAACTAAGTAGAGTAAAAGTAATTGATATGACTGGTCCTGAACAGAGAATTTTATCTGGATATCATGCTATATCTGGTGTAAAAAAACCAACAGATCAGTGGGAAATACGAAAAGATAAAAAATACTCAAATTTTGATCTACCCGAGTTATTACACAATCTCAACCTATTAGTTGAAATAGCTGAACAAAATATAATTACTAATAATCAAGAACTTTGTACTTCGGAAGATCGACTTATTGTCATTGAACAAGAAACTACAAAATTAGGAGAAAGTATTAATGAAAAAAATAAATCAATTGAATCTCTTGAAAAAATGATAATTGTCATGGAATCTTTAAATGATGCATTAAAAAAAAATATGTTAGATAGTAACCAAGCTATAAAACGTTTAACAGAAATGAAAGAAAATTACTACCCAGATTATCGGCTTAATGGTGGATCAGTCTTTGCTTTATCAATTTCTCAAATATTGATAAAAGAAATGCTATCTACATGGAATCCATTACAAGATCCAACAATGCCTTTCGTAGAACTCAAAAAATGGAAAGAACTATTAACATTAGATGAGCCATGTGCTGTTGGTTTTCAATCAAGTGATGAATTTCAAACATTAATTTGGCAAGAATGGGTACCTCAAGTTCAAAAAGCATGCGGGCAATGGAAATGTCGAGATTATAACAGTATGTTGAAACTTATTGAACAATCAGCTGAATTGATACCAATTGACATAATTAATAAAGTTCTTGAAAATATGATTTTACCTAAAATACAGTCGGAAGTAGAACAATGGGATCCGTTAACTGATATTGTTCCAATCCATTTATGGATTCACCCATGGTTGCCTTATTTAAGTAAACATTTCGAAACAATAGTTTATCCAACACTAAGACAAAAATTAAGTGTAGCATTAAATGCCTGGCATCCATCTGACAGTTCTGCTAAGCTGATGCTCCAACCATGGATAAATGTTTTTCAACAAGGCTACATGGAAGCTTTTCTAATAAAAAATATTGTTCCTAAATTACAAGCGGCTCTACATGCTTTTGTTATCAACCCACATCACCAACAATTGGACAATTGGAATTGGGTTAATGCATGGTCAGATGTATTACCATTGCCTACATTAGTGGAATTGTTGGACCAACATTTCTTTCCTAAGTGGCTTAAAACACTTACTATGTGGATAAATATGAATCCTAATCACGAACAAATAAGTAATTGGTATACAGGATGGAAGTCTTTAATACCTCCTGTTATTGTTGAACATCCAACCATTAAAGGGAGATTTCATTCAGCTTTGGATATAATGAGCCGAGCAGTTGGAGGACCTTCTATGCCACAACCACCTCCACCGCCAACAATTCACGGTGGTCTAGCTGAAGCTGTACGTACTGCATCACAAATGCCACATGGCTTTAAAGAATTAGTACAGAAACGTTGTGAGGAACGAGGTATTTTATGGATGCCTATGTCTGGTCGTTTTAGAGAAGCCAAACAAGTATATAGATGTGGAGCAAGACTTCAAGCATTTATTGACCGTGGAGTTTTATTTGTTAGCCAAGATGGAACAAATTTTGCTCCAATGTCTGTACAGTCCATGTTAGAATTATGTGAATAA
- Protein Sequence
- MSDDEMEKFEITDFDLDNEFNMNRPQRRLTKNQAIYGIWADEEGNDSDDEPSGFGGRRKNKDKKYKQNYTAPVSFVAGGVQQAGKEKKEIKTEENKDNEPHNLEDNISASSDEEKPAFSFDIDQELAGLRKKRSQVNSSLMNKGLGDWEKHTKGIGAKLLLGMGYQPGHGLGKKLQGILAPIEANLRKGRGAIGAYGPESKTKPMKVDGEKAADKSKDNKVLVSGWRKALKAEKTQYIYKTAEEVIEESKQPGQRKREFNELSRVKVIDMTGPEQRILSGYHAISGVKKPTDQWEIRKDKKYSNFDLPELLHNLNLLVEIAEQNIITNNQELCTSEDRLIVIEQETTKLGESINEKNKSIESLEKMIIVMESLNDALKKNMLDSNQAIKRLTEMKENYYPDYRLNGGSVFALSISQILIKEMLSTWNPLQDPTMPFVELKKWKELLTLDEPCAVGFQSSDEFQTLIWQEWVPQVQKACGQWKCRDYNSMLKLIEQSAELIPIDIINKVLENMILPKIQSEVEQWDPLTDIVPIHLWIHPWLPYLSKHFETIVYPTLRQKLSVALNAWHPSDSSAKLMLQPWINVFQQGYMEAFLIKNIVPKLQAALHAFVINPHHQQLDNWNWVNAWSDVLPLPTLVELLDQHFFPKWLKTLTMWINMNPNHEQISNWYTGWKSLIPPVIVEHPTIKGRFHSALDIMSRAVGGPSMPQPPPPPTIHGGLAEAVRTASQMPHGFKELVQKRCEERGILWMPMSGRFREAKQVYRCGARLQAFIDRGVLFVSQDGTNFAPMSVQSMLELCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01037788;
- 90% Identity
- iTF_00184574;
- 80% Identity
- -