Aaph013067.1
Basic Information
- Insect
- Aphidoletes aphidimyza
- Gene Symbol
- PAXBP1
- Assembly
- GCA_030463065.1
- Location
- CM059999.1:5387869-5392060[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.57 5.6e+03 -3.2 0.0 55 122 431 497 424 507 0.59 2 2 1e-32 9.8e-29 100.9 3.4 1 272 624 835 624 837 0.91
Sequence Information
- Coding Sequence
- atgtcattgttTCGTCGGCCAAAAAAAGCGGTTGTTCATCGTCGGGTGTTTAGTGCggctgatgatgatgaaaatgtggaaaattccgacaatgaaaattccaatCGAAATAATGGCGAAGAAATGGCGAAGGGAAATGATCGCGTAAAAACACCGCCTCCGCCAAATATTAGCGATTCTCGtagaaatgacaaaaaatcaaaagatgataaaaaatCCAGCAAAAAAACGTCGCTACTTAGCTTTGGAGATGATGAAGAGGATGGTGAAGTGTTTCAGGTGAAGAAATCATCGCACAGTAAAAAGGTTATGAAGATGCTAGACAAAGAACGACGCCGAAAGAAAAATCGTGAAAAAGATTCGACACATGCAACGGCTCATGAGTCCACTAGTGATGCGTAtggaaaaaccaacaacggtttcaacaacaaaacaaatgcatgtGACGTTGTTCGGGCAACGTCATATGATGATGCTACGTCCGATATGGGCGATGGCAACGATGATTTGACCAATCAAAAACGGTCCAAATCATCGCAAATTTCCAATTCTAGCATACATACTGAAATACGCACTGACGACTTTGTGCTTGTGGTTAAAAAAACTGAAGTTGAACCGAATCTTATATTAAATGGACGAGCGGCACTGTGTGCTGGACGCGATGACATGTCTTCAGAAGAAGAGGCTGAAACCGATGACCATCACCATCGTTTCAAAAAACCGGATAATTTCAAAGCTTTGTTGGAGAGCGGTGCTATTCCCGATGCAGCTATGATCCATGAAGCACGTAAAAAACGACAAAAGGCTCGTGAGTTGGGTGATTATGTTGCTATTGAAGAGAAGCCACCAGttgacaataaaaaacaagGTCGATTGATACGCGAAGAGGCTGATGATGATGCGTCAGAAGATGAAAGAGTTGATATGTCAGCCATAACGGGATCCAAAGAACTTGATGAACGACGTGAAAAATTCTACTCAGTTCAAGGCCATGGCTCAGATGAGGATTCAGATTTGGAAATGAACGAATGGGAGAGTCAACAAATTCGCAAAGCAATAAGTGGTTCTCAGCTTATGAATGCTCAGCAAGAAGCATATTCGCATTTTCTTATCAAAGATGGATCAAATGATTCATCGAATGTCCAAGTACAGGTGTCAACAAAAAATCTTCTAGATCAAGCGTATGCAAGTTCAAACATCTCGAAATCTCATTTATTGAAGTCGAACCAAAAAACGGAAAAGAAAACTGGCCCACGAATGccacatgaaattttcgataTGGTAAAAGATCGTCTAAAGCAAGTaaaagaattgaatgaatcacACATGAGCCAAATTCAAAAGATAACAAACGATATGAATGTTATCACATTGGAAGAATTAGAATGCGAACAAAATGCACCAATCGTAGCGGCCAAATATCGTTTTTATCAAGAGCTCAAAGGCTACGTACTCGATTTTATCGAATGCTATGATGAAAAACtgccaaaaataaacgaattagAACGAAAATATGTTGTTGCAGTTGTTAAGTATTCGAATTTACTGATCGAACGAAGACGTCAAGATGTTCGCGATCAAGCGAGAGAGATTACACAATCACAAAAACCAGGAAATTTGGCATCCATGAACAATGCTGCCCGGAAAGAAGAAGAGCAACGTGTACAACGGGCTGCAGAACGAGAAGGAAGACGTACGAGACGACGaagagatCGTGAACGCAAAGAAACGTTAAACAATCATCTCGATGGCATGTCTAGCGATGATGAAGTGCCAGACCATGAAGCTACCGCATACAAGAATCAATTGAAGCAAATCAATGCCGAAGCGATGTTAGTTTTTGAGGATGTAACAGAAGACTTCAGTGATCTGTCCACAATTTTGCAGCATTTTGAGGATTGGCGTAAACGTGATATGGCTTCCTATAAGGACACTTACTTTAGCATTTGCCTGCCGAAGattATTGGGCCAAtgattcgattaaatttattaacaTGGAATCCACTAGAGAAGGATCCGAAAATTCTGGAGAAAATGGAATGGTATGAAACTGTAATGAAATATGGATTTAAGCCAAATGAAACAGAGGCTCAACTTATTGATGATCCTGACATTCGGCTGGTGCCAACGCTTATGGAAAAGATTGTTTTACCCAAAATCACTGaattcattgaaaagtcATGGGATCCATTATCCTCATCTCAGACACTGAATTTAGTGACACTAATTCGTCGAATGATCGAACACTATCCATCACTCAAACCGACATCtaaatacatgaaaaatcTATTTACAACCACATTAGACAAGATGAAAGTATCACTTGAAAATGACGTATTTATACCGATTTTCCCAAAGCAACTACAAGAagcaaaatcatcatttttccagCGCCAGTTCAGCAGTGCATTGAAACTGTTTCGGAATTTCTTAAGTTGGGAAGGCATTTTGTCTGATAGCGCTTTGAAGGATTTAGCTATATCATCTTTACTCAATCGATATCTTCTATCGGCAATACGGATATGCGTTCCAGTGGATGCAGCAAATAAATCACACATCATCGTAAACACACTACCACGAGTTTGGCTTCAACAGCCTTCGATAGTTGACAATCTTGATCTATTTATACAGTTTCTGAGGTCATTAGTAAGTCAGCTTGACAGTCGAAATCCATTGCATAGTGGAGCGGTTAAAAAAACAGAGcaaatttttgaaacatttcgatTGCCAATGACACCGTCTatataa
- Protein Sequence
- MSLFRRPKKAVVHRRVFSAADDDENVENSDNENSNRNNGEEMAKGNDRVKTPPPPNISDSRRNDKKSKDDKKSSKKTSLLSFGDDEEDGEVFQVKKSSHSKKVMKMLDKERRRKKNREKDSTHATAHESTSDAYGKTNNGFNNKTNACDVVRATSYDDATSDMGDGNDDLTNQKRSKSSQISNSSIHTEIRTDDFVLVVKKTEVEPNLILNGRAALCAGRDDMSSEEEAETDDHHHRFKKPDNFKALLESGAIPDAAMIHEARKKRQKARELGDYVAIEEKPPVDNKKQGRLIREEADDDASEDERVDMSAITGSKELDERREKFYSVQGHGSDEDSDLEMNEWESQQIRKAISGSQLMNAQQEAYSHFLIKDGSNDSSNVQVQVSTKNLLDQAYASSNISKSHLLKSNQKTEKKTGPRMPHEIFDMVKDRLKQVKELNESHMSQIQKITNDMNVITLEELECEQNAPIVAAKYRFYQELKGYVLDFIECYDEKLPKINELERKYVVAVVKYSNLLIERRRQDVRDQAREITQSQKPGNLASMNNAARKEEEQRVQRAAEREGRRTRRRRDRERKETLNNHLDGMSSDDEVPDHEATAYKNQLKQINAEAMLVFEDVTEDFSDLSTILQHFEDWRKRDMASYKDTYFSICLPKIIGPMIRLNLLTWNPLEKDPKILEKMEWYETVMKYGFKPNETEAQLIDDPDIRLVPTLMEKIVLPKITEFIEKSWDPLSSSQTLNLVTLIRRMIEHYPSLKPTSKYMKNLFTTTLDKMKVSLENDVFIPIFPKQLQEAKSSFFQRQFSSALKLFRNFLSWEGILSDSALKDLAISSLLNRYLLSAIRICVPVDAANKSHIIVNTLPRVWLQQPSIVDNLDLFIQFLRSLVSQLDSRNPLHSGAVKKTEQIFETFRLPMTPSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00367214; iTF_01288130;
- 90% Identity
- -
- 80% Identity
- -