Basic Information

Insect: Aphidius ervi
Gene Symbol: PRDM10
Assembly: GCA_015776835.1
Location: MKYW01000023.1:1531490-1535790[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.011 1.1 9.8 0.6 2 23 506 527 505 527 0.96

2 13 1.8e-07 1.7e-05 24.9 2.2 1 23 562 584 562 584 0.98

3 13 6e-06 0.00059 20.1 0.6 1 23 593 616 593 616 0.98

4 13 0.027 2.7 8.6 0.2 2 23 634 655 634 655 0.96

5 13 0.00016 0.015 15.6 0.7 2 23 668 690 667 690 0.95

6 13 0.00077 0.075 13.4 3.9 1 23 719 741 719 741 0.97

7 13 0.0088 0.86 10.1 2.0 2 23 750 771 749 771 0.96

8 13 0.00049 0.048 14.0 0.3 1 23 778 800 778 800 0.98

9 13 0.00012 0.011 16.0 3.3 1 23 836 858 836 858 0.98

10 13 0.00032 0.031 14.6 3.6 1 23 864 887 864 887 0.97

11 13 0.0018 0.17 12.3 1.7 1 23 969 992 969 992 0.97

12 13 3.2e-05 0.0031 17.8 2.4 1 23 1014 1037 1014 1037 0.97

13 13 0.0033 0.33 11.4 5.5 1 23 1074 1097 1074 1097 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.011	1.1	9.8	0.6	2	23	506	527	505	527	0.96
2	13	1.8e-07	1.7e-05	24.9	2.2	1	23	562	584	562	584	0.98
3	13	6e-06	0.00059	20.1	0.6	1	23	593	616	593	616	0.98
4	13	0.027	2.7	8.6	0.2	2	23	634	655	634	655	0.96
5	13	0.00016	0.015	15.6	0.7	2	23	668	690	667	690	0.95
6	13	0.00077	0.075	13.4	3.9	1	23	719	741	719	741	0.97
7	13	0.0088	0.86	10.1	2.0	2	23	750	771	749	771	0.96
8	13	0.00049	0.048	14.0	0.3	1	23	778	800	778	800	0.98
9	13	0.00012	0.011	16.0	3.3	1	23	836	858	836	858	0.98
10	13	0.00032	0.031	14.6	3.6	1	23	864	887	864	887	0.97
11	13	0.0018	0.17	12.3	1.7	1	23	969	992	969	992	0.97
12	13	3.2e-05	0.0031	17.8	2.4	1	23	1014	1037	1014	1037	0.97
13	13	0.0033	0.33	11.4	5.5	1	23	1074	1097	1074	1097	0.96

Sequence Information

Coding Sequence: ATGGATGATAGGGGCCCTCATAATGAGGGGGCCCCAATTGATCCACTTGATATTTCAATGATGGATAAAACATCTGAATTATCTGAATGTTGGAATTCAACAAATTCACTTGGTACATTATCAGAACATCATCATCATCATCAAATTAAAATTAACAATAACAATAATAATAATCGATTATTATATTTAACTGTTGAATATGTTGAGGAACAATCAAGAGATTATTCAAGAATGTTTCCAACATATGAACAAGTTATATATTCACCACGTCCAAATTCACCTTTATCAGATTTTGAACATCGTGTTAGTCCACTTGATCCAAATATGAGTTCAACAGCACGTTATTCACCAACACCAGTTCAATTACCACAAATACAATATCAAAATTCAGTTGTTGTATTACAAGATCAAACATCACCAATTATTGTACATCAAACTGATGATAATCAACGTGCTAATATTAATTTTATAAATCAACAAAATTCAACACAAACAACACAATCAAATGTTAATGATGTTGAAGATTTTAATGTTGACAATACTAATGATACAGAAGAACTTGTATCAAGTGTTGCCAATGAATTAATACTCATGCAAAGTAATAATAATGAATTAGAAACAACAACAGCACCATTAATGTTAGCTGAAATACCAGGTACTGATTTTACTCTTGCACGTGATTTTTTAGTAATGCATGATGAACAATTAAATGTAATGTCATCATTGAGAAATCAAAATAATGAAATAACAAATGATGATACACTTGTTGTACATGAAGAATTAATGACAAATGAAAAAACAAATTTACTTGAACAAAATATTATTAATATTGATGATATTCAATTGAAAATTGATGATGATGATTTAATTGTATCTAAAACACAAACTGATGAAGATAATAAAAATACAAGAGTAAAATTAAAACGTCAAATTAATGATAAAAAAACATTTCGATGTGATGATTGTAATGCAGTTTGTCTTAAAATTGGTGAATGTAGCTGTCAACATAATGTTTGTACAATTGCTGATCAACCAGTACCATCACGTGCAATAGCAACACTACCTGGTTCATATTTATCAATAACAAAAATTCAAACAGGTAATGTATGTGATAATATAATTTATGGTGTATTTGCTAAACGTAATATACGTCGTCGTACACAATTTGGTCCAATTGAGGGTATTGTATGTACATATGATGGTAAACCATTTTTAAATTGTTTACCATTACTTTATGAAACAAATGTATATGGTGAATTTTTAAAAATTGATGTATCAAATGAAAATTCATCAAATTGGATGCGTTTTGTACGTCCAGCATGTGTTTATAAAGAACAAAATTTAATAATATGCCAACAAAATGATGGTATTTTTTTTTTAACAACTAAAAATATATTACCAAATGAAGAATTAAAAGCTGGACCAAGTTTTGAATATGCATTACGTAGAAATCTTAAAATACTTGAACCTGATATTAATGAAAATACAATTATTTATGATAAAAATATTAATTTACAATGTTTTGATTGTAATGAATATTTTAATAATTCAGAAATATTAAAAAATCATTTATTAAATCATGATAATAATAATAATAATAATAATGGTGAAACAAGTAAAATTAAAAAAACAAATGAAAATAAATTATTTAAAATTATTGATGGACAAACAACACAAAATATTTATACATGTCCACATTGTCGAAAAATATTTCCACGTAGTTATAGTTTAAAACGTCACATGATAATACATAAAAATTTAAAAAATCATAATAATTATCAATGTAATGAGTGTAATGAAATATTTATAAATTCACAAAAATTATTAAGACACATAAAAGTATTTCACGATGATAATAGAAATAATAAAGAAAAAGAAAATTCACGTAAATTAAATAATGAATGTAAAATATGTAATTTATTATTTGATAAATTACCATTATTAAATTTACACATGATACAACATAATAAAAATATAATTGATAATAAAAATAAACAATTACATTGTCCAGAATGTAATATTGAATTTAATTATCAAAATGATTTAATAAAACATATTACAAAATTACATGGTAAAAAAATAAAACAATCAAAAATAACACAAAAAAATAAAACAAAAAATGATAATAATAATAATAATCATATATTATCATCACATAAATGTACAATGTGTTATAAACGTTTTGCAACAAAAGTACGTTTACAACAACATTATCTTGTACATGGTTCAGATGATAAAAAACCATTACCATGTAATATTTGTTTAAAAAGATTTATGAATAATTCAGCATTATCATGTCATTTAAAAACTCATTGTGAAGATAAACAAATATTTGAATGTCCAATGTGTCGTAAATTATTTAATCAAATATTACAGTTAAAAGATCATATTGAAACACATCGTAATGATGATAATACATTTAATTGTCCATATTGTTTACGTCAAAAATTTTTAAAATATTCAGTTATACGTAAACATATACTTGCTTATCATTGTGAAAGAAAACATAAATGTCAATATTGTAGTAAAACATTTCCAACAATTGATAAATTACGTATGCATTTATTACGTCATTCTGATTATCGTGAATTTAAATGTAATGAATGTTATTCACAATTTAAACGTAAAGATAAATTAAAAGAACACATGACAAGAATGCATAATTCACAAAGAATTATAAAAAGGGAACAACAACAACAACAACAAAAATCACAACAACAGCAACAACAACAACAACAACCACAGCAACAACAATGTACACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATTTATTCCAAAAGTAAATCCAACAGATTATAATCGTTTTATTTATAAATGTCATACATGTTTAGTTGGTTTTAAAAGACGTGGTATGTTGGTTAATCATTTGGCTAAAAGACATCCAGATGTATTACTTGAATCAATACCAGAATTAAATTTACCAATATTACGTCAAACACGTGATTATTATTGTCAATATTGTGATAAAGTATATAAAAGTTCAAGTAAAAGAAAAGCTCATATTATGAAAAATCATCCTGGTCAAACATTACCACCAAGTAATAGACAAAAAGATAATAATAATTTAAATGGTTTAGAAAATTCAACATATTGTCAAACAGTTGGATCAATAACAACAATACCACATAATTGTCAATGGTGTCATAAACAATATGCAAGTAAAGCTAAATTATTACAACATCAACGTAAAAAACATTCAAATTTAATGGAACCAGCTGATAAAATACCACGTCAACGTAATCGTCCATCTGACAGTCAAAATCAACCACCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTGGTGGACAATTTGTTAGAATGAGAGATATACGTTGA
Protein Sequence: MDDRGPHNEGAPIDPLDISMMDKTSELSECWNSTNSLGTLSEHHHHHQIKINNNNNNNRLLYLTVEYVEEQSRDYSRMFPTYEQVIYSPRPNSPLSDFEHRVSPLDPNMSSTARYSPTPVQLPQIQYQNSVVVLQDQTSPIIVHQTDDNQRANINFINQQNSTQTTQSNVNDVEDFNVDNTNDTEELVSSVANELILMQSNNNELETTTAPLMLAEIPGTDFTLARDFLVMHDEQLNVMSSLRNQNNEITNDDTLVVHEELMTNEKTNLLEQNIINIDDIQLKIDDDDLIVSKTQTDEDNKNTRVKLKRQINDKKTFRCDDCNAVCLKIGECSCQHNVCTIADQPVPSRAIATLPGSYLSITKIQTGNVCDNIIYGVFAKRNIRRRTQFGPIEGIVCTYDGKPFLNCLPLLYETNVYGEFLKIDVSNENSSNWMRFVRPACVYKEQNLIICQQNDGIFFLTTKNILPNEELKAGPSFEYALRRNLKILEPDINENTIIYDKNINLQCFDCNEYFNNSEILKNHLLNHDNNNNNNNGETSKIKKTNENKLFKIIDGQTTQNIYTCPHCRKIFPRSYSLKRHMIIHKNLKNHNNYQCNECNEIFINSQKLLRHIKVFHDDNRNNKEKENSRKLNNECKICNLLFDKLPLLNLHMIQHNKNIIDNKNKQLHCPECNIEFNYQNDLIKHITKLHGKKIKQSKITQKNKTKNDNNNNNHILSSHKCTMCYKRFATKVRLQQHYLVHGSDDKKPLPCNICLKRFMNNSALSCHLKTHCEDKQIFECPMCRKLFNQILQLKDHIETHRNDDNTFNCPYCLRQKFLKYSVIRKHILAYHCERKHKCQYCSKTFPTIDKLRMHLLRHSDYREFKCNECYSQFKRKDKLKEHMTRMHNSQRIIKREQQQQQQKSQQQQQQQQQPQQQQCTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFIPKVNPTDYNRFIYKCHTCLVGFKRRGMLVNHLAKRHPDVLLESIPELNLPILRQTRDYYCQYCDKVYKSSSKRKAHIMKNHPGQTLPPSNRQKDNNNLNGLENSTYCQTVGSITTIPHNCQWCHKQYASKAKLLQHQRKKHSNLMEPADKIPRQRNRPSDSQNQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGGQFVRMRDIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00132779; iTF_00131480;
90% Identity: iTF_00132779;
80% Identity: -