Basic Information

Insect: Apamea sordens
Gene Symbol: -
Assembly: GCA_945859755.1
Location: CAMAOQ010000107.1:589009-606569[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 7.5 6.2e+02 2.0 1.5 1 23 206 229 206 229 0.86

2 14 0.0065 0.54 11.6 0.5 1 23 321 344 321 344 0.92

3 14 0.0012 0.1 13.9 0.0 2 21 382 401 381 402 0.93

4 14 7.2 6e+02 2.0 2.4 1 23 407 429 407 430 0.86

5 14 2.3 2e+02 3.6 1.5 1 13 703 715 703 722 0.76

6 14 0.32 27 6.3 3.6 1 23 735 757 735 757 0.96

7 14 0.0034 0.29 12.5 1.0 2 23 763 784 762 784 0.96

8 14 0.32 27 6.3 0.7 1 14 807 820 807 828 0.72

9 14 0.0017 0.14 13.5 0.2 2 23 905 926 904 926 0.97

10 14 5.8e-07 4.8e-05 24.4 2.7 1 23 932 954 932 954 0.99

11 14 1.4e-05 0.0012 20.0 0.5 2 23 960 981 959 981 0.96

12 14 0.0035 0.29 12.5 1.8 2 23 988 1010 987 1010 0.96

13 14 0.035 2.9 9.3 0.1 1 20 1017 1036 1017 1037 0.95

14 14 0.00084 0.07 14.4 2.5 3 23 1049 1069 1048 1070 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	7.5	6.2e+02	2.0	1.5	1	23	206	229	206	229	0.86
2	14	0.0065	0.54	11.6	0.5	1	23	321	344	321	344	0.92
3	14	0.0012	0.1	13.9	0.0	2	21	382	401	381	402	0.93
4	14	7.2	6e+02	2.0	2.4	1	23	407	429	407	430	0.86
5	14	2.3	2e+02	3.6	1.5	1	13	703	715	703	722	0.76
6	14	0.32	27	6.3	3.6	1	23	735	757	735	757	0.96
7	14	0.0034	0.29	12.5	1.0	2	23	763	784	762	784	0.96
8	14	0.32	27	6.3	0.7	1	14	807	820	807	828	0.72
9	14	0.0017	0.14	13.5	0.2	2	23	905	926	904	926	0.97
10	14	5.8e-07	4.8e-05	24.4	2.7	1	23	932	954	932	954	0.99
11	14	1.4e-05	0.0012	20.0	0.5	2	23	960	981	959	981	0.96
12	14	0.0035	0.29	12.5	1.8	2	23	988	1010	987	1010	0.96
13	14	0.035	2.9	9.3	0.1	1	20	1017	1036	1017	1037	0.95
14	14	0.00084	0.07	14.4	2.5	3	23	1049	1069	1048	1070	0.95

Sequence Information

Coding Sequence: ATGGCGGACACATCAAGAAAAAGGTCGAGAAAGTCGAAATTAGTGCCTCGAGAGTGTGCTGTTGACGAAGATGATCTTGAATTTCAGGTTTCAGAGCCGAAGGTACCTAAAACCATAAAACAGCCCACAAACAGAGAATCAACAAAAAATGTGATAGTAACACCACCAGAGCCAACCTGCTCAAAAACAGAAGAGGTCGACACGAGCGTCCTGAAAAAAATTAACGCGGCAGCTAGGGAAGGTAATGAGACACAAACCAGGATATCGCCAAGAAAATTCGAGATTAACATTGAAGTAGAATCatgtgatgatgacgatgaattTGAAGGACTTGTTGACGCAAATCATTTATCACCGCATGTTAAAGAAACGACAAAAGTAAGGACCGAACCTATTGAACTTTCTCGAGAAATCATTCTCGATGCAGCCGACAATATACTCCAAAATTCAACAAATATTGCTGATAAAATTCTAAATATGTATGTTAGGAACACGATAGGGTATAATGAGAAGACGAATCTGGTGTTAGACTGCCATGAGAAGCGAATACAAAAGACCTTAGATGAATGGCGTACGTGGCAGTTCCGTAGTTTCCACAGAGAAGACCCTCTATTCTACAAATGCTATATCTGCACGAGGTCCTGGTGGTATTTAACAGACTTCCGCAACCATTTGTCTACAAAACACCctggtgatttatttattagaatagCTTTGGAAAAATATGAAATGCATGAAGCCAATTTGATAGCGTACCACCAAAGGCTTGTTGTGATAAAAGATATATATACAGAAGGACTTTGCTACCGATGCGGTAAGGATTATGGTGCTCATGAGTTAGAATCGAGGTTCCAGGAGAAATATTACAAAACGGAAGGTTgcacaaaacagttttttagCTGTATGGGTCTAAGAGACCATTTTGCTAGCTGTCCTGTCTGTAAAAAAGAGGGTAAACTGTTCAAATGTGATATATGTAAGTCAAGATTTAATACAGATGAGGAGTTAAACAGTCATTTAGTGTTGTCTCATTCCGTTCGGTCTGATATACCGATAATGTCTCACTATAAAAACTGCAAACGCTGCTCGGAGAGGTTTTCTTgtcaatatttacataaatgtggACAAAAGGTACCCCATAGCGAGTGTCCTTACTGTCCACAGAGCTTCTCAAATGTCATGTCTTTGGAAATACATTTGTTACGGTCAAATATGCCTTACAAATGTGAAGTCTGCCAAGAGGTGATGGTGTATAGCTGTAAAAAGTATGAACATATGTTGAAACACACGGACAAGTATATGATAGTAAGGAAATGTGTGACGTGTGAGGGTTTGAACGTGTTTTTGAATTACGAAGATGCAGTGGCACATCGATCGTTGAAACATGAggtcaaagaaacaaaaaatcagAGCTATTTTCCTAAAATTTTAGTACCGTCATCCTGTGTTTATGAAAGTTTAGCAGAATCAGAATGGAATGAACAAGAATCCGCATTGGAAGAACAAGAATTGTTACTGGAAGACCAAGAATCAGAACAGGAAGAAAAAGAATCGGTCCTGGAAGAACAAGAATTAGTACTGGAAGGAACAGAATCAATACCTGAAGAAGAAGAATCCTTACTGGAAgaagaattaatattaaaaagtgAAAGAGAATCAGTTTCAGTATGTGAGCAGAAATTGTTACAAGCAGAGCTAGAATCAGCAACAGAATTTATGTTGGGAACTGTTGTCAAAcAAGAACCAGAAGACTTAGAAGACAGCCCAAGACTTGTTATCAAAGAAGAACCATTCGAAGAATTTGAAAACCAAATGCATGAAGAAGAGAATCCTACCGAGAATTATGAACACGAAATAAGTGTCAAAGAAGAATACGTAGAGGAAGAAGAATATGAAGAAGATATCATCAAACTGAACTTCAATATAGAAGACTTATTAGCAAAACAAGAATCAATTCAAGAAGATGACGATTATAGTGTAGAACAGACGGAGACCCAAGAATCAGAAGATGATGATTCAGAAGAATTTCCACAAAAATTGAAAGAAGATTCCATGCTGGAACCAGAAGTTATTATAGATCGGGATGATAGAAAGAACAAAAAACTATACAGATGTACTAAATGTGGATTTACAGCGAAGCATAAACAATATAGAAATCACGTGGACTATGACTGTGGCACCAACCCAATCAAACATAAAACGTATACGTgcacaaaatgtcaaaatacatttgcgtctatgaaaaaatatttgacacatTTCAAGGAGCATGGCTATAAACACCTCTCCTGTCCCGATTGCCTGAAAGAATTTGACACATACACACATCTAGGTCAGCATCTACAACAGCACATCAAACAAAATTTTGTCCGAGTAAAAATGATCACACACGCAGGCAAGGCTATGACAAAACCTGACTATCAATGCAAAAAATGCGGAAAAATCATAGTTTCTCGTTATTTTTTTGAGCATTGGGAACTGCATGTAAATGCCCAGCCTACGCATCCTATTAAAGTGACTTCGAGGCCGAAGCATAAGCATGGAGAATTGCATGAAACTATTATAAAGGAGTGTATTGccCGCTTGTACAAACAGCCAAAAGAGTGCAATCATTGTCACCGTTGGTTCAAACGGGTCAACGAATGCAAGCGCCACATTATAGAACATCTATTAAATGATGCATACAACCAAAAACACATCTACAAGGAGCTCAAATGCCAGGTCTGTGAGCAAGGGTTCGCTGTAccagaaaaatataaacaacatATGCGGGACCATGCGTCCCTACCTGTGTACAAGTGTGAACTGTGTGATCGTACCTTTAGTGACTCAAGCAActttacaaagcataaaaaagtGCATAATTTGAAAGTGATTGTTTGTGATTTGTGCGGTAAAAAGTTTCAATCGAAAGTGTCTTTGCAGAAACATATTGAGAAACACATGGACTCAGAGCCGATTACCTGCAAGATCTGCAACAAAATCTTCTACTTCGATACATCTTACCGTCGCCATGTAAGGTACTTCCACGAGAAAACCATCATTGGCTATAGGTGCGTTATCTGCGGTGAACGCTTCGATAGTCTTAAACTTAAATGGAACCATATGTGGGAGGTACATAACGAAAGGAAGCAGAAAGCGGACTGTCCCATCTGCCACCAGTCCTTCAGGAAGTACTCCGATGTCCGTCTCCACGCAAGAGTACACCATATGACGGAGGTTTCAGTGTTAAACGTCAAAAAACAAGCTTCGAAGTCAAATATAGATATTGATAAATACTTAGGGGATCCTGCTAAGATCAAAGCTGGGAGGATGGAGACTTTGGTTGTgtatgattctgattga
Protein Sequence: MADTSRKRSRKSKLVPRECAVDEDDLEFQVSEPKVPKTIKQPTNRESTKNVIVTPPEPTCSKTEEVDTSVLKKINAAAREGNETQTRISPRKFEINIEVESCDDDDEFEGLVDANHLSPHVKETTKVRTEPIELSREIILDAADNILQNSTNIADKILNMYVRNTIGYNEKTNLVLDCHEKRIQKTLDEWRTWQFRSFHREDPLFYKCYICTRSWWYLTDFRNHLSTKHPGDLFIRIALEKYEMHEANLIAYHQRLVVIKDIYTEGLCYRCGKDYGAHELESRFQEKYYKTEGCTKQFFSCMGLRDHFASCPVCKKEGKLFKCDICKSRFNTDEELNSHLVLSHSVRSDIPIMSHYKNCKRCSERFSCQYLHKCGQKVPHSECPYCPQSFSNVMSLEIHLLRSNMPYKCEVCQEVMVYSCKKYEHMLKHTDKYMIVRKCVTCEGLNVFLNYEDAVAHRSLKHEVKETKNQSYFPKILVPSSCVYESLAESEWNEQESALEEQELLLEDQESEQEEKESVLEEQELVLEGTESIPEEEESLLEEELILKSERESVSVCEQKLLQAELESATEFMLGTVVKQEPEDLEDSPRLVIKEEPFEEFENQMHEEENPTENYEHEISVKEEYVEEEEYEEDIIKLNFNIEDLLAKQESIQEDDDYSVEQTETQESEDDDSEEFPQKLKEDSMLEPEVIIDRDDRKNKKLYRCTKCGFTAKHKQYRNHVDYDCGTNPIKHKTYTCTKCQNTFASMKKYLTHFKEHGYKHLSCPDCLKEFDTYTHLGQHLQQHIKQNFVRVKMITHAGKAMTKPDYQCKKCGKIIVSRYFFEHWELHVNAQPTHPIKVTSRPKHKHGELHETIIKECIARLYKQPKECNHCHRWFKRVNECKRHIIEHLLNDAYNQKHIYKELKCQVCEQGFAVPEKYKQHMRDHASLPVYKCELCDRTFSDSSNFTKHKKVHNLKVIVCDLCGKKFQSKVSLQKHIEKHMDSEPITCKICNKIFYFDTSYRRHVRYFHEKTIIGYRCVICGERFDSLKLKWNHMWEVHNERKQKADCPICHQSFRKYSDVRLHARVHHMTEVSVLNVKKQASKSNIDIDKYLGDPAKIKAGRMETLVVYDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01093596;
90% Identity: iTF_00123782; iTF_00121950; iTF_00122899;
80% Identity: -