Asor018101.1
Basic Information
- Insect
- Apamea sordens
- Gene Symbol
- ZFY_1
- Assembly
- GCA_945859755.1
- Location
- CAMAOQ010000047.1:3291951-3315715[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.14 11 7.5 0.7 1 23 121 143 121 143 0.97 2 12 0.25 21 6.6 4.1 1 23 150 172 150 172 0.97 3 12 0.72 60 5.2 1.5 1 15 176 190 176 199 0.82 4 12 5.4e-06 0.00045 21.3 3.6 1 23 204 226 204 227 0.95 5 12 0.0018 0.15 13.4 0.9 2 23 234 255 233 255 0.97 6 12 1.2e-05 0.001 20.2 0.7 2 23 269 290 268 290 0.97 7 12 1.4 1.1e+02 4.3 4.7 3 23 296 317 294 317 0.95 8 12 4e-05 0.0033 18.6 3.6 2 23 328 350 327 350 0.97 9 12 0.11 9.3 7.7 0.8 1 23 357 380 357 380 0.93 10 12 0.0038 0.32 12.3 0.4 5 23 392 411 390 411 0.93 11 12 0.00015 0.012 16.8 4.6 1 23 420 442 420 442 0.98 12 12 0.00075 0.062 14.6 0.4 1 23 447 470 447 470 0.97
Sequence Information
- Coding Sequence
- ATGACAAAGCCTGTAGTACCAGGCTTACATGCCCGGCACTACGGCAGTCTCGCTTTGGAACCACTAGGATATAACGTCATTGAAAAAGAAACCAATGATCTGAATTCAACATTGCCGCTAAAGAAGAGATTAGAGAAGCGAGCCAAGCTAGAAGATGATGACTTcccaaagaaagaaaaatcggAGGAAAAGAATGTCACTGAAGAAAATGAACAGCAAATGGATAATTCTCAACCTAAGACGGAAACCCCCTTGATGTACTCCTACGAAACATTAAGGAATGTAGAAATTGTGACCATCAATGAAGAAGAACGTCAGAAGGAGTACCAGGAGACGTTGAGGTCGCGTCAGCACATGCGGCATGTGTGCGTGCACTGCGCGCTCGGCTTCGTACTCAAGCAGGCGTTTGATGTGCATATGAAGGTTCATTCTCCCCAATCAGGTGACCACGAGTGCTTACTCTGCCACTCCCGGCTCAAAACCGCTGACATGTTATACCGGCACCGCTTACGGCATTACCGCCGCTACCGGTGCCTGCTTTGCCGGACGCGGTTTAAAGATAAAGACACTGCCGCCTGCCATGTCATGAACGATCATGCCGGACAGACCTTCGAGTGCGATCATTGTGGGAGAGGATTCAAACGACCGCAGTACCTGAAGAGGCacgtggaacagcaccacaccAAGCCCCACCATCTCGAATGTGGCGTATGCTTCCGAGTCTTCCACGAGAGGGGCTGGTATAGGTCTCATATCAGgACTCATAACGAGGAGGTACGAGCCAAGACGGTGCGCCTGCCAGTCACCTGCGAGATCTGCTCCCGTGACTACAAGAACAAGGCCAGCCTGAAGCGTCACCTTCTCACCCACGACGAGAATGTCCACTGTGAGATCTGTTACGAGAAGTGCAAGAATCGGATCACGTTGGGACATCACTACTTGAAGGTGCACAATGAGAAATATGTTGGTGCACCAGAGCAGACTTGCCCGCACTGCGACCGGATCTGCGCTACGCGCGCGATGCTCAAGCGGCACATGCAAAGGATGCACAGCGATAGAACGAAGAAATACCAATGCGATCACTGCCAGCGTCTTTACCTCACGAAAGGCGAGGTTCGGGCCCACATCACGTGGTCGCACATGCCGGCTGAGGCCCGAGGGGGGCACGCCTGCACGTGTGGTCGCATCTTCAGGAGCCCCTCGCTGCTTCGCGACCATAAGGCCAGGTTCCATGCGTCACAGCCACCACCAAGGGTCCACCAGTGTGAACACTGTGAAAAGGCTTTTGCGAATAAACAAGTGCTGAATCGTCACAAGAAAAGCCACTCCAACGAGATGTATCCCTGCAAGGAATGTGGATTGCTCTTCAAAACTCAACCTTATGTCAAGGTCCACTACCAAATCAAACATCTAAACATGACGAGAGCACAAATCAAAGCTCAGAGGAAACTCAACAAGGAACAGTTAATACAGAATAATATACATAGAACTACGAATTGGGAACCACCCATCTCTAACAAGAAGAAGAGTTCTGTTGCTATCGAAAAGGAGGAAGACCCTCTTTTGGTTCAGGAGGGGGATGTACAAATTAAATTGGAGAAGGAAGAGGAACTACAAATTCCAACGTTCCAAACCTTCGTAGATATTACTAGAGAATGA
- Protein Sequence
- MTKPVVPGLHARHYGSLALEPLGYNVIEKETNDLNSTLPLKKRLEKRAKLEDDDFPKKEKSEEKNVTEENEQQMDNSQPKTETPLMYSYETLRNVEIVTINEEERQKEYQETLRSRQHMRHVCVHCALGFVLKQAFDVHMKVHSPQSGDHECLLCHSRLKTADMLYRHRLRHYRRYRCLLCRTRFKDKDTAACHVMNDHAGQTFECDHCGRGFKRPQYLKRHVEQHHTKPHHLECGVCFRVFHERGWYRSHIRTHNEEVRAKTVRLPVTCEICSRDYKNKASLKRHLLTHDENVHCEICYEKCKNRITLGHHYLKVHNEKYVGAPEQTCPHCDRICATRAMLKRHMQRMHSDRTKKYQCDHCQRLYLTKGEVRAHITWSHMPAEARGGHACTCGRIFRSPSLLRDHKARFHASQPPPRVHQCEHCEKAFANKQVLNRHKKSHSNEMYPCKECGLLFKTQPYVKVHYQIKHLNMTRAQIKAQRKLNKEQLIQNNIHRTTNWEPPISNKKKSSVAIEKEEDPLLVQEGDVQIKLEKEEELQIPTFQTFVDITRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01441398;
- 90% Identity
- iTF_00449573;
- 80% Identity
- -