Asor018809.1
Basic Information
- Insect
- Apamea sordens
- Gene Symbol
- retn
- Assembly
- GCA_945859755.1
- Location
- CAMAOQ010000050.1:1950924-1958793[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-19 3.7e-16 60.1 0.0 17 89 31 101 25 101 0.94 2 2 6.2 1.5e+04 -2.8 0.0 25 38 229 242 191 244 0.58
Sequence Information
- Coding Sequence
- ATGTGTAAAGCAGTGCAGCTTGGAATTACTGATAACATCACTGGTGATAGATTGACAGGCTCAACGTATCCAATAACAAAATACCTACCAGGCACTCCAATCAACCGGCTACCGATAATGGCGAAGTCGGTGCTAGACCTGTATGAATTGTACAACCTAGTGATTGCTCGCGGCGGCCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATTATCAAGGGACTGCGGCTGCCGTCATCCATTACATCTGCTGCCTTCACGTTACGCACACAATACATGAAATACCTGTATGATTACGAGTGCGAGAAGAAGAACCTTTCAACTAGAAGCGAGCTAGACGCAGCCATTGAAGGGAACAAGCGCGAGGGTCGCCGCGCATCAGGACAGTACGACGCACAAGCTGCTTTAGCTatgCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGTTGTCGCTGTCGCTAGGAGGTGTCGCACCACGCttgccgccgctgccgccgcacgcgccgcaccTCGCTCAGCACGACCTCGAGTACAGGGTGCGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGTTAATGAGAAATGGCTCCGAATCACCCCCTAGCAATGGTCCTGCTCCAATAATGTCTCCTCGCGACGCAGCAGCCCTCAGTGCCATCGATGTCTCCCGTCTCACTCTCTGGTCGCTCtacaataataacaacaacaacagcccACAACCCGACCTCGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCCCTGACGAGCGGCGGCAAGCGCGAGGCGTGCCgctcgcccgcgccgcccgccaagcgccgcacgccgcgcccgcTGTCGCGGCCCCCCTCGCCGCACTCCGACCTCTCGCCGCCGCAGCACCGCCACAGCCGCAGGGACACCACTTCACCGCCACAGATCAACGGCATGCCCAATTCCAATGGTGTCAATGGAGCTGCCTTCAAGATTACTACCAGGGGAGACGCGAGCACAGGTGACCAGCAACTGGTAGTATCAATAGAACTGAACGGAGTAACATATGAAGGAGTACTTTTTCCTTCAGGAAGCGGTCAGAACGGACACAGACAAATGGTGtcttaa
- Protein Sequence
- MCKAVQLGITDNITGDRLTGSTYPITKYLPGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDLEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPLSRPPSPHSDLSPPQHRHSRRDTTSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -