Aepo011284.1
Basic Information
- Insect
- Apamea epomidion
- Gene Symbol
- -
- Assembly
- GCA_947507525.1
- Location
- OX382239.1:15219133-15230905[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-12 6.6e-10 38.9 0.0 1 38 15 53 15 57 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGTAATTATAAAAGAACTACTTCTAGACAAGAATGGGATCCAGATAACATGAAAAAAGCCGTTCAAGCGGTATTTGATGGCACCATGGGTTACTTGAAAGCTGCCAAAACTTTTGAGGTACCAAAATCAACATTACAAGATCGAGTAAACCGATTTAGACAGAACAATGACCTGGAGTGTTCCACACGAAAAGGTTTGGGACGATTTAAACCGATTTTTTCAGTTTCCCAAGAACAAAGTCTAGTTGAGCATGTCTTGATCATGGAAAAACGATTATTTGGTCTCACGTATAAAGATCTTCGACGCTTAGCGTATCAGCTCGCAGAAGCAAACAATATTGACCATTGTTTCAATAACGTTTATAAACTAGCGGGAGAAGATTGGCTGGCTGGGTTCATGAAGCGACACCCACAATTATCACTGCGTGCTGCCGAGCCGACGTCGGTGGCAAGAGCAATGGGATTTAATATGGTCAGTGTCAACAGATTTTTTGATTTGTTAGAGGAAGTTATAGATCAATATAAATTTTTGCCTACGAAAATTTACAATGTGGATGAAACGGGCCTGACAACGGTACCAAAAAGACAAAGCAGAATAGTTGCTTTAAAGGGAAGAAAACAGGTTGGTCTAGCTAGTTCAGCGGAAAGAGGCCAGCTGACTACCGCTGTCCTGTGTGTGTCTGCTTCTGGAAATTATATTCCTCCACTGCTAATATTTCCACGAGTTCGGATGAAGGCTGAACTTCTAGATGGTGCTCCACCAGGGACAGTTTCGGTTTGTCATCCAAGTGGGTGGATACAAAGTGATATTTTTGTTGAGTGGTTGAATCACTTCATATCGTCAGTAAAGCCCAAAAAAGATGATCCTGTCCTTCTTTTACTCGATGGACACTCGACCCATACAAAAAATCTCCCACTGATCGAAAAAGCTAGGGACAATGGAGTTGTAATTTTAAGTTTCCCCCCTCATTGCACCCACAGACTTCAACCGCTTGACGTGAGTATCATGGGTCCATTAAGCACTTATTACACCCAAGAAGTGAACGCGTGGCTACGGAATAATCCGGGTAGAGTAGTGACACAGTTCCAGCTGGCAAGACTTTTTGGAGCAGCGTACTGTAAAGCGGCAACTGTACAGAACGCCGTATCTGGCTTTACTAAAACAGGCATATTCCCAACGAACAGGACAGTATTCGGAGAAGCAGATTTTGCCGCGGCTGAGACAACGGAAATACCTTCTACAACTCCATCAATTTCCACCGATGCAGATGTCAACCCGACACCATCAACTTCTTCAGCGCCATTCGTTCACTCAACACCATTAATTTCTGCTCTACCTATTGAGCCGACGCCATTAACTAGCACAGCATCGCCAGTTCTTACAACGTTGAACCAGAACCGTGTAACGGTGTCTCCAGCGGATATAATGCCAGTTCCTACGATAAGCGTGGACCGTAAAAGAGCAACCGATAACCGAAGAGGAAAAACTGCAGTTATCACTTCCTCCCCCTATAAAAACGAcagcctCGTTGCGGCCTCTCGCCGCCTGGCAACACAGCCGGGCGGCCGTGCGAGAGGCGCGGGCGACGGCCAACGAGGCTACCCAACACGCTACCTTCGCTCATCCAATGGCCGAGCAGCAGCGGGTGGCGTGAGCATCACACCACCCTGCGCGGACCAATGGCGGCGCCCTTCCACGCACCGGTGGGAGCGGGGCGCTGGCGGCGGCAGTTGTGCGCTCCGGCAGACGAGCGCGGCTCTCGTCAACTTGCCTTCGCGCGCCATCAGCGACCGGTCGACACAACAACCGAAAACTCAAACTATTTATTTCAACCAAACCAATTACAGGCACTTTTGA
- Protein Sequence
- MPRNYKRTTSRQEWDPDNMKKAVQAVFDGTMGYLKAAKTFEVPKSTLQDRVNRFRQNNDLECSTRKGLGRFKPIFSVSQEQSLVEHVLIMEKRLFGLTYKDLRRLAYQLAEANNIDHCFNNVYKLAGEDWLAGFMKRHPQLSLRAAEPTSVARAMGFNMVSVNRFFDLLEEVIDQYKFLPTKIYNVDETGLTTVPKRQSRIVALKGRKQVGLASSAERGQLTTAVLCVSASGNYIPPLLIFPRVRMKAELLDGAPPGTVSVCHPSGWIQSDIFVEWLNHFISSVKPKKDDPVLLLLDGHSTHTKNLPLIEKARDNGVVILSFPPHCTHRLQPLDVSIMGPLSTYYTQEVNAWLRNNPGRVVTQFQLARLFGAAYCKAATVQNAVSGFTKTGIFPTNRTVFGEADFAAAETTEIPSTTPSISTDADVNPTPSTSSAPFVHSTPLISALPIEPTPLTSTASPVLTTLNQNRVTVSPADIMPVPTISVDRKRATDNRRGKTAVITSSPYKNDSLVAASRRLATQPGGRARGAGDGQRGYPTRYLRSSNGRAAAGGVSITPPCADQWRRPSTHRWERGAGGGSCALRQTSAALVNLPSRAISDRSTQQPKTQTIYFNQTNYRHF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00111553; iTF_00007010; iTF_00111554; iTF_00007011; iTF_00111555; iTF_00007012; iTF_00111556; iTF_00007013; iTF_00007014; iTF_00007015; iTF_01119243; iTF_01062732; iTF_01119244; iTF_01119245; iTF_01119249; iTF_00000244; iTF_01118197; iTF_01118198; iTF_01118200; iTF_00973689; iTF_00667290; iTF_00667291; iTF_01230459; iTF_00667292; iTF_01230460; iTF_01230461; iTF_00111550; iTF_00667294; iTF_01230462; iTF_00111551; iTF_00667295; iTF_01230463; iTF_00111552; iTF_00784328; iTF_00784327; iTF_00302026; iTF_00122289; iTF_00042551; iTF_00042550; iTF_01085080; iTF_01085068; iTF_01085079; iTF_01230456; iTF_00123284; iTF_00924529; iTF_00906040;
- 90% Identity
- iTF_01230456;
- 80% Identity
- -