Basic Information

Insect: Apamea crenata
Gene Symbol: ZFY_1
Assembly: GCA_949629185.1
Location: OX451377.1:1605888-1621935[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.15 14 7.4 0.7 1 23 145 167 145 167 0.97

2 12 0.28 25 6.5 4.1 1 23 174 196 174 196 0.97

3 12 0.79 72 5.1 1.5 1 15 200 214 200 223 0.82

4 12 6e-06 0.00055 21.2 3.6 1 23 228 250 228 251 0.95

5 12 0.002 0.18 13.3 0.9 2 23 258 279 257 279 0.97

6 12 1.3e-05 0.0012 20.1 0.7 2 23 293 314 292 314 0.97

7 12 1.6 1.5e+02 4.2 4.8 3 23 320 341 318 341 0.95

8 12 4.4e-05 0.004 18.5 3.6 2 23 352 374 351 374 0.97

9 12 0.12 11 7.7 0.8 1 23 381 404 381 404 0.93

10 12 0.0042 0.38 12.3 0.4 5 23 416 435 414 435 0.93

11 12 0.00016 0.015 16.7 4.6 1 23 444 466 444 466 0.98

12 12 0.00083 0.075 14.5 0.4 1 23 471 494 471 494 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.15	14	7.4	0.7	1	23	145	167	145	167	0.97
2	12	0.28	25	6.5	4.1	1	23	174	196	174	196	0.97
3	12	0.79	72	5.1	1.5	1	15	200	214	200	223	0.82
4	12	6e-06	0.00055	21.2	3.6	1	23	228	250	228	251	0.95
5	12	0.002	0.18	13.3	0.9	2	23	258	279	257	279	0.97
6	12	1.3e-05	0.0012	20.1	0.7	2	23	293	314	292	314	0.97
7	12	1.6	1.5e+02	4.2	4.8	3	23	320	341	318	341	0.95
8	12	4.4e-05	0.004	18.5	3.6	2	23	352	374	351	374	0.97
9	12	0.12	11	7.7	0.8	1	23	381	404	381	404	0.93
10	12	0.0042	0.38	12.3	0.4	5	23	416	435	414	435	0.93
11	12	0.00016	0.015	16.7	4.6	1	23	444	466	444	466	0.98
12	12	0.00083	0.075	14.5	0.4	1	23	471	494	471	494	0.97

Sequence Information

Coding Sequence: ATGACAAAGCCTGTAGTACCAGGGTTACATGCCCTGCACTCCGGCAGTCTCGCTTTGGAACCACTAGGATATAACGTCATTGGTGTTAAGAATAAATggaagaatattatttatttgcaagaatacgAGTACAATAAGTTGACCAATATTCATAAAAAAGAAACCAATGATCTGAATTCAACATTGCCGCTAAAGAAGAGATTAGAGAAGCGAGTCAAGCTAGAAGATGACGACTTCCCAAAGAAAGAAAAGTCGGAGGAAAAGAATGTCACTGAAGAAAATGAACAGCAAGTGGATAATTCTCAGTCTAAGACGGAAACCCCCTTGATGTACTCCTACGAAACATTAAGGAATGTAGAAATCGTGACCATCAATGAAGAAGAACGTCAGAAGGAGTACCAGGAGACGTTGAGGTCTCGTCAACATATGCGTCATGTGTGCGTGCATTGCGCGCTCGGCTTCGTACTCAAGCAGGCCTTTGATGTGCATATGAAGGTTCATTCTCCTCAATCAGGCGACCACGAGTGCTTACTCTGCCACTCCCGGCTCAAAACCGCTGACATGTTGTACCGGCACCGCTTACGGCATTATCGCCGCTACCGGTGCCTGCTCTGCCGGACGCGGTTTAAAGATAAAGACACTGCCGCCTGCCATGTCATGAACGATCATGCCGGACAGACCTTCGAGTGCGATCATTGTGGGAGAGGATTCAAACGACCGCAGTACCTGAAGAGGCACGTGGAACAGCACCATACCAAGCCCCACCATCTCGAATGTGGCGTCTGCTTCCGAGTCTTCCACGAGAGGGGCTGGTATAGGTCTCATATCAGGACTCATAACGAGGAGGTACGAGCCAAGACGGTGCGCCTGCCGGTCACCTGCGAGATATGCTCCCGCGACTACAAGAACAAGGCCAGCCTGAAGCGGCACCTTCTCACTCACGACGAGAATGTCCACTGCGATATCTGTTACGAGAAGTGCAAGAATCGGATCACGTTGGGACATCACTACTTGAAGGTGCACAATGAGAAATATGTCGGTGCACCAGAGCAGACTTGCCCGCACTGCGACCGGATCTGCGCTACGCGCGCAATGCTCAAGCGGCACATGCAAAGGATGCACAGCGATAGAACGAagaaATACCAATGTGATCACTGCCAGCGTCTCTACCTCACGAAAGGCGAGGTTCGGGCCCACATCACGTGGTCGCACATGCCGGCTGAGGCCCGAGGGGGGCACGCCTGCACGTGTGGGCGCATCTTCAGGAGCCCCTCGCTACTTCGCGACCATAAGGCCAGGTTCCATGCGTCACAGCCACCACCAAGGGTCCACCAGTGTGAACACTGCGAAAAGGCTTTTGCGAACAAACAAGTGCTGAATCGTCACAAGAAAAGCCACTCCAACGAGATGTATCCCTGCAAGGAATGTGGATTGCTCTTCAAAACTCAACCTTATGTCAAGGTACACTACCAAATCAAACATCTAAACATGACGAGAGCACAAATCAAAGCTCAGAGGAAACTCAACAAGGAACAGGTAATACAGAATAATATACATAGAACTGCGAATTGGGAACCACCCATCTCTAACAAGAAGAAAAGTTCTGTTGCAATCGAAAATGAGGAAGACCCTCTTTTGGTACAGGAGGGGGATATACAAATCAAATTGGAGAAGGAAGAGGAACTACAAATTCCAACGTTCCAAACCTTTGTAGATATTACTAGAGAATGA
Protein Sequence: MTKPVVPGLHALHSGSLALEPLGYNVIGVKNKWKNIIYLQEYEYNKLTNIHKKETNDLNSTLPLKKRLEKRVKLEDDDFPKKEKSEEKNVTEENEQQVDNSQSKTETPLMYSYETLRNVEIVTINEEERQKEYQETLRSRQHMRHVCVHCALGFVLKQAFDVHMKVHSPQSGDHECLLCHSRLKTADMLYRHRLRHYRRYRCLLCRTRFKDKDTAACHVMNDHAGQTFECDHCGRGFKRPQYLKRHVEQHHTKPHHLECGVCFRVFHERGWYRSHIRTHNEEVRAKTVRLPVTCEICSRDYKNKASLKRHLLTHDENVHCDICYEKCKNRITLGHHYLKVHNEKYVGAPEQTCPHCDRICATRAMLKRHMQRMHSDRTKKYQCDHCQRLYLTKGEVRAHITWSHMPAEARGGHACTCGRIFRSPSLLRDHKARFHASQPPPRVHQCEHCEKAFANKQVLNRHKKSHSNEMYPCKECGLLFKTQPYVKVHYQIKHLNMTRAQIKAQRKLNKEQVIQNNIHRTANWEPPISNKKKSSVAIENEEDPLLVQEGDIQIKLEKEEELQIPTFQTFVDITRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01441398;
90% Identity: iTF_00449573;
80% Identity: -