Basic Information

Insect: Apamea anceps
Gene Symbol: -
Assembly: GCA_951799955.1
Location: OX637505.1:8100772-8108708[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 3.7 3.1e+02 3.0 0.9 1 23 54 77 54 77 0.94

2 20 0.1 8.5 7.9 4.1 1 23 84 107 84 107 0.97

3 20 5.9 5e+02 2.3 4.0 1 23 193 215 193 215 0.96

4 20 0.002 0.17 13.2 1.0 2 23 221 242 220 242 0.97

5 20 2.4 2.1e+02 3.5 1.4 1 23 248 270 248 271 0.94

6 20 0.24 20 6.7 3.4 2 22 504 524 503 524 0.95

7 20 0.1 8.5 7.9 2.6 1 23 620 642 620 642 0.95

8 20 3.2 2.7e+02 3.1 0.3 2 23 779 800 778 800 0.95

9 20 0.0013 0.11 13.8 0.5 2 23 880 901 879 901 0.96

10 20 0.19 16 7.0 0.3 1 23 909 931 909 931 0.97

11 20 5.9 4.9e+02 2.3 2.6 1 23 968 990 968 990 0.93

12 20 0.00028 0.024 15.9 4.0 1 23 998 1020 998 1020 0.99

13 20 0.12 10 7.6 1.9 1 23 1099 1121 1099 1121 0.99

14 20 0.98 83 4.8 0.1 2 19 1206 1223 1205 1227 0.92

15 20 0.0026 0.22 12.9 1.0 1 23 1292 1314 1292 1314 0.96

16 20 0.0054 0.46 11.9 0.3 1 23 1320 1342 1320 1342 0.97

17 20 0.0079 0.66 11.4 2.6 1 23 1432 1454 1432 1454 0.97

18 20 0.0002 0.017 16.4 1.4 1 23 1460 1482 1460 1482 0.99

19 20 0.98 82 4.8 2.7 1 23 1575 1597 1575 1597 0.96

20 20 0.011 0.97 10.9 5.6 1 23 1608 1630 1608 1630 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	3.7	3.1e+02	3.0	0.9	1	23	54	77	54	77	0.94
2	20	0.1	8.5	7.9	4.1	1	23	84	107	84	107	0.97
3	20	5.9	5e+02	2.3	4.0	1	23	193	215	193	215	0.96
4	20	0.002	0.17	13.2	1.0	2	23	221	242	220	242	0.97
5	20	2.4	2.1e+02	3.5	1.4	1	23	248	270	248	271	0.94
6	20	0.24	20	6.7	3.4	2	22	504	524	503	524	0.95
7	20	0.1	8.5	7.9	2.6	1	23	620	642	620	642	0.95
8	20	3.2	2.7e+02	3.1	0.3	2	23	779	800	778	800	0.95
9	20	0.0013	0.11	13.8	0.5	2	23	880	901	879	901	0.96
10	20	0.19	16	7.0	0.3	1	23	909	931	909	931	0.97
11	20	5.9	4.9e+02	2.3	2.6	1	23	968	990	968	990	0.93
12	20	0.00028	0.024	15.9	4.0	1	23	998	1020	998	1020	0.99
13	20	0.12	10	7.6	1.9	1	23	1099	1121	1099	1121	0.99
14	20	0.98	83	4.8	0.1	2	19	1206	1223	1205	1227	0.92
15	20	0.0026	0.22	12.9	1.0	1	23	1292	1314	1292	1314	0.96
16	20	0.0054	0.46	11.9	0.3	1	23	1320	1342	1320	1342	0.97
17	20	0.0079	0.66	11.4	2.6	1	23	1432	1454	1432	1454	0.97
18	20	0.0002	0.017	16.4	1.4	1	23	1460	1482	1460	1482	0.99
19	20	0.98	82	4.8	2.7	1	23	1575	1597	1575	1597	0.96
20	20	0.011	0.97	10.9	5.6	1	23	1608	1630	1608	1630	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCACAAGTCGGCGAGGTCGCGACTATCGTGCGCCACCTTGAAGGCCGCGTCTGCGGCGACGTGTCTTCGGAGGCTTCCTCGGACGCCGCCGAAGATTTTGAATTACCACAGTGCAAGATAAGGAGGAATTATAATTGCACCAAGTGCACGTTCTACACGCAGAACCCGCGCGCTTATCTCGTCCACACGCGTGACGCTCACTTCGTTAGACTCAAGATTTACGATTGTCCCCACTGTGTTTACGCATCGAGACATCATCAAAAACTTATAAGACACGTCAAAATGGTTCACGGAGGATCAAAGTCGACTCCAGTGGCTAGTAAAGTGGAAGCAGAGCTATCACCTCCGTCCAACGATAACATGGAGCAAGTAGAGCGCATTGAAGACATGTTCGAGGAAGTCGAGGACTGCGAGGATATGATGATGGAAGTAGATGATGACTCCATGGACCAACCTGATGATATCGACGGCGACTGCGATAGGAGTGTTGACTACGGTTCGCCTTCTTATCGGAGGGCACATCTGTCAAAAGCTAAGGGCAAATTCTTCTCATGCGATAAGTGCAACTATGTCACGCACATAAGAGCTAGATTCACAAAGCACGTCAAGTATCATTCGATGCCTATGATCAAGTGTACAATGTGTGATTTTCGAACTCCATACAAGTGGAATTTGGACCGTCATATGAAGAACCACGGTGGAAGTGGGAGTTTCAATTGTTCGATGTGCAACTTCACGGCGGACATCAAGCAGAGTCTGACGGTGCACGAAATGAATCATCACACACCGCCAGCGGGCCAATCGCTGTCGAGTCGCCGCCGCAACCGGGTGGGCGCCAGCGACACGGTTATCGCGGAGTTCGACGCAGCGAGCACGTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGGTCTCGgACATGGGTCTTCAGTACGCAGAGAGAGAACTAGTCAGTTGCAAAAGCGATTCCAATGATGGTACAGCATCTGACGCGCTTACCAGAAAAGAGACTTCGCAAGATGGATACAACCAGCTTTCACCAACCTACAGCGCAGAcgagaaacaacaaaaacaaagcaGAAAGATTCCCCGACCAATACCACAACTCATACCGTTAAACTCATCAACACCCAACCAAAAACAAACATGCTCCGGGGAACCGCCACAGAAAAAGTTCAAGGAATCTTTACCCATCGACATTGATGATATGTCAGCTGAAAATACTCTTCTACCAGCAAATTCATTAATAAAAGAGACTGCAGGTCGAAAGAAAAATGAATCGTTCTTCGACAGATTAAAAGAAAGACTGTTAACAGAAACAGGCGAAGAAGGCTCACTAATATGCAAGATCTGTGGATTTGAAAGTAAATGCTTATCAGAACACTCTGTCCACGAGAAAAATTGCTCGCCACAAACTAACCGGATCAATGCAAACACGTCGCTCAAAAGTTTAAGTTCCACTCGATGCCAGAATTGTAGACATAGATGTAAATCTAGCGCCGACTTATATATCCACATGCAAACTTGCGGAAAGAGCGAAAAAATCGACGATGTAAATACTAAAAATGAAAATAGTAATGATGAAGTCATTCCAATCCATGAAAAAGAGACTGAACCGCATCCAATGGAAAACGTCGTTTTCGTATGGAACAACATTAACCATGACCCTAACAAGTTTGATGTACCTCTAGACATAAACATTAATGATGATTCAACTCTACCAGAAATACATCGAAGTTTTGACGCTGAGATTGTTGATGAAAATGAAAGCATGAATTTGTCGCCGAGTCAAGCTATAGGAAGGAAGGTATTTAAATGTCCACATTGTCCATTTTTCTCTACAACAGCGTCCAGATTTCACGTTCATATCGTGGGCCACTTGAACAAGAAACCGTTTGAGTGTTCCCTCTGCAAATATAAATCTAATTGGAGATGGGATATAACCAAACACATTAAATTGAAATCTGCGAGGGATCCTGAGCATAACGAAGCAAAAGTACTCATGACTGATGAAACAGGAAGAAGAAACTATAGCAAATACAACAAATTCTTAGCAATGCctgttttaaatgaaaatggCGAAAATGAGTTTCATTACCTGGACCCTAACACTGCAGTCGATAGTTCGATGGAAATGGATGAATCATTTAATGATATATCAGACGTTATGAATGTTCAATTTGAAATGCAACCGCTTAACTTACAGACTCAACACAGTGAAGATAATTACAACTTTATTGATAACAGAGGTCTCAATGATATGAAGAAACCCAAGAAAACATTATGGAAATGTAAAAGATGTAACTACAAAGATGCCTCAAGAGAAGCTCTTTTAGATCATGTTCGTGAACACTCCAGATCGGATGGCGTCCATGACGAACTAAACAAACCGCCTATTAAGAAACCTGAAAATAATACTCCCGACCCAGCAGACCTGGCATATCGTTGTGGCCATTGTAACCAATTGTCTAATTGGAAACATGTCATACAGCGCCATTGCCGATTAAAACACGACGGAGTGATCAAAGTGATAACTACAGTTAAACCAAAACCGGACCCACCAATGAACATCAATGAGATCAACATTGACACTTGCAACAAATGCCCGTACAGGACGAGTGATAAGAAACTACTCATTGCTCATTTACAACAGCATCAGCCGTCCCCGAACTCTATTTTCAAGTGCTACTTCTGCCCATTCTTCGTAAAAGATGAGCCAGAATTAATCTCACATCTACTCCTGCACGGTATCACTGACCCAGAAGATTACATCGCAAAAGCAATGGGAACCAAATCCCCAGGACCACCAGAACCGCAAGCACCTGTTACTACGACATTAAACTCCACCAAGCGACACAAATGCATAGAATGTCCATACGAAACAAATAGTAAGTCACAATTCATGTACCACGAACAATTTCACCGACTTCCTGCTGATACGCCTTATAAATGTCCCGAATGCAACTACAGCGTATCTAAGAGACACCTGCTGCACCAGCATCTGCGAGTACACGGAATCAAAAGAATTGAAACTGAGGCCGAATTAGAAGCTGCACAAAGCAAGGTAGCGAAAATAGACTTCCATATTAATCTTGATGAAATACCCTATGTCTGGGTTTCGGCCAAGAATGAGTTTCATAAAATGTACAAGTGCCGATATTGTTCATACGTTAATgctgtaaaaagtaaaataccAAATCATGAAAAAATTCATTGCATCGTATTCGAAAACAATGATACAACTATTTACAAGTGTTTGGAATGTAAATTCACATGTGATAACGCCGGCAGGCTAGCCGAGCATTCCAAAACTCACGGGGAAATATATGGTCGCATTTATTGTCCCGTTGAATATGATGTTCCCGATGATgaacaaatcactaaattgagAAAGGTTATAGAAATTGAAAAGTCAGCAAATCCAGAAAGTTTCACTAGAGATGAAGGCACTACGCACGAATTaagagaaataaaattattatatttttgtcaaaAGTGCCCAGCAAGATTCTTTGAAGACTGCGAACTTGACGTTCATGAAAAATGTCATGATGTAAcattgccaaataaatgtaaaatttgTGACTTTTCAGTCACCGAAGAAAATGAATTAGCGGCACATGATACCGTGCACACAGATGAATATCACACAAAAACGAAGATGCTTAAATTTGTTCACCACTCGCATCCTTTGCACAAACAACCCATGCTAGATTTTGTTCTCTGTCAAAATACTTCGGAGATTACGTGGCGAGCCACTGGGCCAAGTAAACCTGAACATGTCGAAACTCCTATGAAAAAAGATACAAAACACGTgccaaaacaatattattgcaAACAATGTCCAGCTAAGTTCTTCAAAAGTTCCGCGCTTACCTATCACATGGGGCTCCACGGAGGTGATGGCGAGTTTAAGTGCAAGAAGTGTAATTACGCCGTGAAGAACGTTGGAAATCTAGGCAAACATGAATTAGTTCACGAAAATGAGAACAAGGCTACAACTTGTGACTATGAATCTGGCGAAGATATGGATTATAAAAATATCCCTTTGTCGGGCACAGATTTATTCCAGAGAAAGACTGAGGCTCAGAAAAGAGTATTAACTGATAAAGATAAGTTAGTTAAGCCGAACGATCATTTTCCGCCTGTCCTACAAGCTGATCCCCAATTCGGTTATTTAATGCATGGCAATCCTGAATTTATATATCCCACATACCTGAAAAATGGACGTCAAAAAGAAAAGCGATACAAATGCCACAAGTGCCCCTCAGCTTTTGAGAAAAGAGaacaatataaaattcattTGTCCTTGCACGGCTCCAAGCAAAGATATAAGTGTGAGTTATGCGATTATTCAGTAAAATATTACGCTAATTACGTTCAACATATGCGAAAACATCAAATGAACGATGAAGCTCaagctgaaagaaagaaagataataaTGATTTTACAGAATCTGAACAACAAGAAGACGTTAAGCAAGATGACAGCAGTGATAACATTAAACTTGCAATAAAAACTATACCAAAAGGAGGTGCTAAGAGCGACTTTCAACAATTCTCAATTAGCGACCAGCAAACGCTCAGACTGCTGCAGAGGAGGCGATCAATGAATATTAATTCTGGAAAGGACCACAGCACTTCTGAAACTTCGCTGATCAAAGAGCGCAAAATGCACATGTGTCTGTTATGTCCCTACACTAACCAACGTCAAGATTCTTTAAGCAATCATTACAGAAGGCACGGAGACACCGATATTCTGAACGGAGGAAGTCATAAATGTTCCCATTGCGACCTAGTGGTTGTTCAGTCGCATTTCCTTCGGGAACATCTGAAGACACACTTCAATTACCACAAAACTCTTATTCCCGAATGTTTTGTGGCTAACGAAGCTGTTAGTTTTACCATAAGCAAGTTGGATGACGATAGTGAATCAGTTGATCTCAAATTAGACATGCAGAACAAGAGTTTTGCATGTAATGACGAaaagatatttgtaaaaattaaaactggaGAATTATTGGTGGAATAA
Protein Sequence: MLQQMSSPPSAQVGEVATIVRHLEGRVCGDVSSEASSDAAEDFELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDAHFVRLKIYDCPHCVYASRHHQKLIRHVKMVHGGSKSTPVASKVEAELSPPSNDNMEQVERIEDMFEEVEDCEDMMMEVDDDSMDQPDDIDGDCDRSVDYGSPSYRRAHLSKAKGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFNCSMCNFTADIKQSLTVHEMNHHTPPAGQSLSSRRRNRVGASDTVIAEFDAASTLLPKEEEGSGDSRSSHSVSDMGLQYAERELVSCKSDSNDGTASDALTRKETSQDGYNQLSPTYSADEKQQKQSRKIPRPIPQLIPLNSSTPNQKQTCSGEPPQKKFKESLPIDIDDMSAENTLLPANSLIKETAGRKKNESFFDRLKERLLTETGEEGSLICKICGFESKCLSEHSVHEKNCSPQTNRINANTSLKSLSSTRCQNCRHRCKSSADLYIHMQTCGKSEKIDDVNTKNENSNDEVIPIHEKETEPHPMENVVFVWNNINHDPNKFDVPLDININDDSTLPEIHRSFDAEIVDENESMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMPVLNENGENEFHYLDPNTAVDSSMEMDESFNDISDVMNVQFEMQPLNLQTQHSEDNYNFIDNRGLNDMKKPKKTLWKCKRCNYKDASREALLDHVREHSRSDGVHDELNKPPIKKPENNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPPMNINEINIDTCNKCPYRTSDKKLLIAHLQQHQPSPNSIFKCYFCPFFVKDEPELISHLLLHGITDPEDYIAKAMGTKSPGPPEPQAPVTTTLNSTKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIKRIETEAELEAAQSKVAKIDFHINLDEIPYVWVSAKNEFHKMYKCRYCSYVNAVKSKIPNHEKIHCIVFENNDTTIYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEYDVPDDEQITKLRKVIEIEKSANPESFTRDEGTTHELREIKLLYFCQKCPARFFEDCELDVHEKCHDVTLPNKCKICDFSVTEENELAAHDTVHTDEYHTKTKMLKFVHHSHPLHKQPMLDFVLCQNTSEITWRATGPSKPEHVETPMKKDTKHVPKQYYCKQCPAKFFKSSALTYHMGLHGGDGEFKCKKCNYAVKNVGNLGKHELVHENENKATTCDYESGEDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKDNNDFTESEQQEDVKQDDSSDNIKLAIKTIPKGGAKSDFQQFSISDQQTLRLLQRRRSMNINSGKDHSTSETSLIKERKMHMCLLCPYTNQRQDSLSNHYRRHGDTDILNGGSHKCSHCDLVVVQSHFLREHLKTHFNYHKTLIPECFVANEAVSFTISKLDDDSESVDLKLDMQNKSFACNDEKIFVKIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01231174;
90% Identity: iTF_00726922;
80% Identity: -