Aanc011716.1
Basic Information
- Insect
- Apamea anceps
- Gene Symbol
- clz9
- Assembly
- GCA_951799955.1
- Location
- OX637509.1:19929252-19933424[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-08 2.1e-05 25.0 0.0 2 42 152 193 151 196 0.87
Sequence Information
- Coding Sequence
- ATGAGGCGATTGGAGCTATGCTTGCACCCGCTGCTGGTGTACAGGCCGGAAGAGGAGGAGCAGTACGTGGACATGCTgaaTGGACTCTGGCCTGAACAAGCACCACCACCGACTCACAGCATTTGGCTGGCTTGGCTCCTGGAGCGTATTAAATCTGGGGAGCCCTGGCAAGACGAGGATACTAATCCAAGCGATTGGGTCCCGTCGGAGGCACTACCTCCGACTGCCGCTGACGACGGCGGGCCCGGGGGGAGCGGCGTCGGCGAGGCTCAGGAGTCGACGATGACAGCTTTGCTGCAGGCGGCAAAGCGAGCCGTCATCAACGCCGACCGGCCCGCCAAACGGCCGTGCCTCCGGCCAGAAATACCCACGGTCACGTCGGTCACGCCCAAAGGAAAAGGCGTggatatAATGGAggaaaacattaataataaaaaaaataggaaatatAATGAAGCGACACTGAGAACCGCTGTCGAAAATGTATTGGAAAATAATATGACTGTTTACCGCGCGTCTAAAGAATTCGGTATTCCATGGAGTACTCTTAAAGATAATGTTGGACGTGCGAAAGAAGATAGAGAAAATGGAATCAGCACTCAATTTATTAtgtcaaaaattggaagaccATTTTCACTACCGGTGGAATTAGAGCAAAAATTAGTTACATATATAATTGAAATGCAGGAGCTTGGTTTTGGCCTCACAGTAAATCAAATCCGAAAAATTGCCTTTTCGTTGGCAGAGGCCAAAAATCCTAAACATTGCTTTAGCTCAGAGAAAGGTTATGCTGGTTGGAACTGGTGGGTCAGTTTTAAACAGCGTTATGGCTTATCTTTGCGAACACCGGAGAATTTATCTGCTGGCCGAGCAAGTTGTTCGAATCCTGCTATCCTTGCTGACTTTTATGAAAAGTTAGAGAATACCCTAATTGAACATGATTTGGTACAATCCCCGGATAAAATATGGAATTGCGACGAGACAGGCTTAATGTTTGTTAACAAACCTTCCAAAATTGTTTCAAAGATTGGAAAACAGTATGTTTATAATCGTACATACGCTGAAAAAGGTACCACCACTACAGTTCTAGCTGCCATAAATGCTTCTGGATGTTTTCTTCCACCCATGACCATTTTCAAAGGGGTACGAAATATACCACAATTAAGTTCAGGATCTCTTCCAAATAGCTTAACACGACTTTCTCCAAAAGGTTGGATCAATGCAGACTTGTTTTTGGAATGGCTGGAGTTTTTCTCCAAAAACATTCCTCCAGCAAGGCCAGTTTTACTTATTATGGATTCACATGCCAGCCACGTTTCCCCGAATGTTTTAGCTTATgctaaatctaataaaataatattgttcacGATGCCTGCACATACAAGTCACATCCTACAACCACTTGACGTTGGGGTATTTCGGCCGCTTAAAGTAGCTTGGCGTGCTGAATTACAAAAGTACAAAACGCTACATCCAACCTCTGTGCCGACACGTTTTGACTTTCATAAATTTTTGAGTCCCGCATATGAAAGAAGTTTTACCCCATCAAATATTAGAGCAGGGTTTGAGAAGACAGGTATATACCCATTAAATAAAACTGCAGTGTGTCCAGAAGCAATCGCGCCCAGCCGACTTACAGACGTTATTTCCACGGAGCCAATACAAAACATTTTGATCGAAGAAGACCTTGAAGAGTCGATCCCTAACACCATAATAGAAACAGCTATCAGCGACCCCCTCAATGATTCGACATCACAAGGATTTACCACCGTAAGCAATACTGACTCAAATGTAACAAATCCTGCCAGTCCAATCCAGCCTTCTAAACCAAAGAAAATTGAGATTCACGACATTCTAATTCTACCTAAATGGACACCGAAAGCGAAAAAGCAGAATTCTAAAAGGACTGTTCCAAAAGCTATATGCTTAACACCTGTTCAGccgtcaacttccaaacttGAACCTAACAACACGCCACAACAGCCAAAGCAAAAGCCTGCACGAAAAATATCGGCATCTGCAACAGAGAAGGGAAAAGCTAAATCAGTCACTCAAAATAAGCGAGAAATGTCATTAGCAGAAGACGATTGGACATGTCACACATGTGATGGACTGTACTCCGATGATGTGTTGTCAAAAAACGGAGCCGAGTGGataacttgttctttttgcaCGTTACCATATCATGTGCATTGTCAAAGCCAAGATATCCCAAAAGGAAGCCAGCAACAAATTTTTATGTGCGACGCTTGCAGTGTCTCTGATAGCGATGAGGAATAG
- Protein Sequence
- MRRLELCLHPLLVYRPEEEEQYVDMLNGLWPEQAPPPTHSIWLAWLLERIKSGEPWQDEDTNPSDWVPSEALPPTAADDGGPGGSGVGEAQESTMTALLQAAKRAVINADRPAKRPCLRPEIPTVTSVTPKGKGVDIMEENINNKKNRKYNEATLRTAVENVLENNMTVYRASKEFGIPWSTLKDNVGRAKEDRENGISTQFIMSKIGRPFSLPVELEQKLVTYIIEMQELGFGLTVNQIRKIAFSLAEAKNPKHCFSSEKGYAGWNWWVSFKQRYGLSLRTPENLSAGRASCSNPAILADFYEKLENTLIEHDLVQSPDKIWNCDETGLMFVNKPSKIVSKIGKQYVYNRTYAEKGTTTTVLAAINASGCFLPPMTIFKGVRNIPQLSSGSLPNSLTRLSPKGWINADLFLEWLEFFSKNIPPARPVLLIMDSHASHVSPNVLAYAKSNKIILFTMPAHTSHILQPLDVGVFRPLKVAWRAELQKYKTLHPTSVPTRFDFHKFLSPAYERSFTPSNIRAGFEKTGIYPLNKTAVCPEAIAPSRLTDVISTEPIQNILIEEDLEESIPNTIIETAISDPLNDSTSQGFTTVSNTDSNVTNPASPIQPSKPKKIEIHDILILPKWTPKAKKQNSKRTVPKAICLTPVQPSTSKLEPNNTPQQPKQKPARKISASATEKGKAKSVTQNKREMSLAEDDWTCHTCDGLYSDDVLSKNGAEWITCSFCTLPYHVHCQSQDIPKGSQQQIFMCDACSVSDSDEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00121379;
- 90% Identity
- iTF_00121377;
- 80% Identity
- iTF_00121377; iTF_00121379; iTF_00121370; iTF_00121371; iTF_00121372; iTF_00121373; iTF_00121374; iTF_00121375; iTF_00121376;