Basic Information

Insect: Apamea anceps
Gene Symbol: clz9
Assembly: GCA_951799955.1
Location: OX637518.1:10669250-10671118[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.6e-08 1.7e-05 25.3 0.0 2 42 15 56 14 59 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.6e-08	1.7e-05	25.3	0.0	2	42	15	56	14	59	0.87

Sequence Information

Coding Sequence: ATGGAggaaaacattaataataaaaaaaataggaaatatAATGAAGCGACACTGAGAACCGCTGTCGAAAATGTATTGGAAAATAATATGACTGTTTACCGCGCGTCTAAAGAATTCGGTATTCCATGGAGTACTCTTAAAGATAATGTTGGACGTGCGAAAGAAGATAGAGAAAATGGAATCAGCACTCAATTTATTAtgtcaaaaattggaagaccATTTTCACTACCGGTGGAATTAGAGCAAAAATTAGTTACATATATAATTGAAATGCAGGAGCTTGGTTTTGGCCTCACAGTAAATCAAATCCGAAAAATTGCCTTTTCGTTGGCAGAGGCCAAAAATCCTAAACATTGCTTTAGCTCAGAGAAAGGTTATGCTGGTTGGAACTGGTGGGTCAGTTTTAAACAGCGTTATGGCTTATCTTTGCGAACACCGGAGAATTTATCTGCTGGCCGAGCAAGTTGTTCGAATCCTGCTATCCTTGCTGACTTTTATGAAAAGTTAGAGAATACCCTAATTGAACATGATTTGGTACAATCCCCGGATAAAATATGGAATTGCGACGAGACAGGCTTAATGTTTGTTAACAAACCTTCCAAAATTGTTTCAAAGATTGGAAAACAGTATGTTTATAATCGTACATACGCTGAAAAAGGTACCACCACTACAGTTCTAGCTGCCATAAATGCTTCTGGATGTTTTCTTCCACCCATGACCATTTTCAAAGGGGTACGAAATATACCACAATTAAGTTCAGGATCTCTTCCAAATAGCTTAACACGACTTTCTCCAAAAGGTTGGATCAATGCAGACTTGTTTTTGGAATGGCTGGAGTTTTTCTCCAAAAACATTCCTCCAGCAAGGCCAGTTTTACTTATTATGGATTCACATGCCAGCCACGTTTCCCCGAATGTTTTAGCTTATgctaaatctaataaaataatattgttcacGATGCCTGCACATACAAGTCACATCCTACAACCACTTGACGTTGGGGTATTTCGGCCGCTTAAAGTAGCTTGGCGTGCTGAATTACAAAAGTACAAAACGCTACATCCAACCTCTGTGCCGACACGTTTTGACTTTCATAAATTTTTGAGTCCCGCATATGAAAGAAGTTTTACCCCATCAAATATTAGAGCAGGGTTTGAGAAGACAGGTATATACCCATTAAATAAAACTGCAGTGTGTCCAGAAGCAATCGCGCCCAGCCGACTTACAGACGTTATTTCCACGGAGCCAATACAAAACATTTTGATCGAAGAAGACCTTGAAGAGTCGATCCCTAACACCATAATAGAAACAGCTATCAGCGACCCCCTCAATGATTCGACATCACAAGGATTTACCACCGTAAGCAATACTGACTCAAATGTAACAAATCCTGCCAGTCCAATCCAGCCTTCTAAACCAAAGAAAATTGAGATTCACGACATTCTAATTCTACCTAAATGGACACCGAAAGCGAAAAAGCAGAATTCTAAAAGGACTGTTCCAAAAGCTATATGCTTAACACCTGTTCAGccgtcaacttccaaacttGAACCTAACAACACGCCACAACAGCCAAAGCAAAAGCCTGCACGAAAAATATCGGCATCTGCAACAGAGAAGGGAAAAGCTAAATCAGTCACTCAAAATAAGCGAGAAATGTCATTAGCAGAAGACGATTGGACATGTCACACATGTGATGGACTGTACTCCGATGATGTGTTGTCAAAAAACGGAGCCGAGTGGataacttgttctttttgcaCGTTACCATATCATGTGCATTGTCAAAGCCAAGATATCCCAAAAGGAAGCCAGCAACAAATTTTTATGTGCGACGCTTGCAGTGTCTCTGATAGCGATGAGGAATAG
Protein Sequence: MEENINNKKNRKYNEATLRTAVENVLENNMTVYRASKEFGIPWSTLKDNVGRAKEDRENGISTQFIMSKIGRPFSLPVELEQKLVTYIIEMQELGFGLTVNQIRKIAFSLAEAKNPKHCFSSEKGYAGWNWWVSFKQRYGLSLRTPENLSAGRASCSNPAILADFYEKLENTLIEHDLVQSPDKIWNCDETGLMFVNKPSKIVSKIGKQYVYNRTYAEKGTTTTVLAAINASGCFLPPMTIFKGVRNIPQLSSGSLPNSLTRLSPKGWINADLFLEWLEFFSKNIPPARPVLLIMDSHASHVSPNVLAYAKSNKIILFTMPAHTSHILQPLDVGVFRPLKVAWRAELQKYKTLHPTSVPTRFDFHKFLSPAYERSFTPSNIRAGFEKTGIYPLNKTAVCPEAIAPSRLTDVISTEPIQNILIEEDLEESIPNTIIETAISDPLNDSTSQGFTTVSNTDSNVTNPASPIQPSKPKKIEIHDILILPKWTPKAKKQNSKRTVPKAICLTPVQPSTSKLEPNNTPQQPKQKPARKISASATEKGKAKSVTQNKREMSLAEDDWTCHTCDGLYSDDVLSKNGAEWITCSFCTLPYHVHCQSQDIPKGSQQQIFMCDACSVSDSDEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121379;
90% Identity: iTF_00121377;
80% Identity: iTF_00121378;