Aanc019241.2
Basic Information
- Insect
- Apamea anceps
- Gene Symbol
- retn
- Assembly
- GCA_951799955.1
- Location
- OX637517.1:13027961-13032940[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-20 1.3e-16 61.6 0.0 15 89 13 85 6 85 0.94 2 2 6.4 1.4e+04 -2.6 0.0 25 38 213 226 175 228 0.58
Sequence Information
- Coding Sequence
- ATGTCGTATAAAATTGTGATTAATGTCTCCCAAAGGGATACAGGCACTCCAATCAACCGGCTACCGATAATGGCGAAGTCGGTGCTAGACCTGTACGAATTGTACAACCTAGTGATTGCTCGCGGCGGCCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCGTCATCCATCACATCTGCTGCCTTCACGTTACGCACACAATATATGAAATACCTGTATGATTACGAGTGCGAGAAGAAGAACCTTTCAACTAGGAGCGAGCTAGATGCAGCCATTGAAGGGAACAAGCGCGAGGGTCGCCGCGCATCGGGACAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGTTGTCGCTGTCGCTGGGAGGTGTCGCCCCACGCTTGCCGCCGCTgccgccgcacgcgccgcaccTCGCTCAGCACGACCTCGAGTACAGGGTGCGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTAATGAGAAATGGCTCCGAATCACCCCCTAGCAATGGTCCTGCTCCAATAATGTCTTCTCGCGACGCAGCAGCCCTCAGTGCCATCGATGTCTCCCGTCTCACTCTCTGGTCACTctacaataataacaacaacaacagcccACAACCCGACCTCGAACCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCCCTGACGAGCGGCGGCAAACGCGAGGCGTGCcgctcgcccgcgccgcccgccaagcgccgcacgccgcgcccgcTGTCGCGGCCCCCCTCGCCGCGCTCCGACCACTCGCCGCCGCAGCACCGCCACAGCCGCAGGGACACCACTTCACCGCCACAGATCAACGGCATGCCCAATTCCAATGGTGTCAATGGAGCTGCCTTCAAGATTACTACCAGGGGAGACGCGAGCACAGGTGACCAGCAACTGGTAGTATCAATAGAACTGAACGGAGTAACATATGAAGGAGTACTCTTTCCTTCAGGAAGCGGTCAGAACGGACACAGACAAATGGTGtcttaa
- Protein Sequence
- MSYKIVINVSQRDTGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDLEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSSRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSGGKREACRSPAPPAKRRTPRPLSRPPSPRSDHSPPQHRHSRRDTTSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -