Aplu085128.1
Basic Information
- Insect
- Anthophora plumipes
- Gene Symbol
- lola
- Assembly
- GCA_951804975.1
- Location
- OX638112.1:28374785-28376899[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.4e-07 0.0071 18.7 0.0 2 38 199 235 198 241 0.83 2 4 6.4e-11 4.9e-07 32.0 0.0 5 39 252 285 249 292 0.85 3 4 0.15 1.1e+03 2.0 0.0 21 34 319 332 305 337 0.80 4 4 1.6e-11 1.2e-07 34.0 0.1 4 39 363 398 360 403 0.93
Sequence Information
- Coding Sequence
- ATGTCTGAGATTGTTAACCAACATGAGATTAATCAGAGCTACTGGTTTAAATGGAATGACTATCAGAATCATTTGTCCGATGTAGTTAGACAACTTTTGGAGGAGGATTGTATGGTGGACGTTACTCTGGCTGCTGCTGGAGAACGTATTCATGCTCATCGCATAGTTCTCTGTGCTTGCAGCACTTTATTTCGAGAGATATTGAGTCAAGTGAACGAAGACCACCCAACAATAATATTAAGCGATATATCTGCACAGGATATAAAATCTATCATAGAATTCACTTATCATGGAGAAGTGAGGGTTCCTGTTGAGAATATTAGCAGTTTATTAGATGCAGCACGTTCATTAAAAATTTGTGGTCTTATCGAGATTGATGGGCTTGATGAAAGTGACTCTATTGCAAGTGCTAAAGATTTCAATGATAATAATGAAGAGCCGATGACTGTAATTAGTGAGAGtgaagaaaatgtaataaatacatTGCAACATGATTATGAGGATTTAGAGGATCAACAGAAACAAGAGATTGAAAATTCCACTtcgcataaaaaaaagaaacgcagaCGCGACACGACGAAAAGGGATTACAGCGATGATATGCTAGCGTCGGCAATTAATGACTTGAAGACCGGTCAAACATTGATAGAAGCTTCTACTAAGCATAACATACCGCGTTCAACTTTGTACATGCGTGCTAAAGCATTAGGTATACATTTAAACGCGTCGAGAAATGAATATCCCGCGGAATGTATGAAAGCTGCTATAAATGCGGTAATTGGTGGATCAAGTTTGCAACATGCATCGGAAATGTTTAGTATACCAAAAACAGTTTTATGGAGAAGGATTCAGAAAGAAGGCTATCAAATATTACGTTCTGAAATGAAACGGTCTTACGGTTCCGATAAACGAGAAGCTGCGGTTAAAGCTCTGGAAAGGGGAGAAAATTTAACTAAAGTTGCTCTCGAATTCAAAATTCCGAAGACCACTTTATTCAGGGATAAAGCTCGATTGGTGGACGAGGGAAAACTGCCGTTATCATTTTGGAAGAAGCGTAAAACGGAAAATGAAGAGTTAAAAAAATCTCGATTAGAAGAAGCTGTTGCTGCTTGCAAAGGAGGAAAAATGTCACAGGCAGCAGCGTCGATGACTTATCATATTCCAAAGACTACTATATGGAGACGTCTTCAACAGGATGGTAAAAAGTCAGAGCGTTCGTTGAACTTGAAAAAGCAAAGAATAACGGACTCTAAACATAATCCGGAAGCGAAAGTACAGGAAGGATCTGATTTTACGTACTGTGAGgTTTCATCGGAAATTCCTATAACTTACATAGATGAAAATAGCATACCTGAagattctgtgataatattaacAGCAGAAGATATGGACGGTCTTAATTTAGAAGAAGGACGACAAATTATTGTTAATTCAgaATCAGGACAAGAGTATGTTCCTTGCGCTATAAGTATCGAGGAAAATTCAAATTACTCTCAGACAGAAAGTTAG
- Protein Sequence
- MSEIVNQHEINQSYWFKWNDYQNHLSDVVRQLLEEDCMVDVTLAAAGERIHAHRIVLCACSTLFREILSQVNEDHPTIILSDISAQDIKSIIEFTYHGEVRVPVENISSLLDAARSLKICGLIEIDGLDESDSIASAKDFNDNNEEPMTVISESEENVINTLQHDYEDLEDQQKQEIENSTSHKKKKRRRDTTKRDYSDDMLASAINDLKTGQTLIEASTKHNIPRSTLYMRAKALGIHLNASRNEYPAECMKAAINAVIGGSSLQHASEMFSIPKTVLWRRIQKEGYQILRSEMKRSYGSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDGKKSERSLNLKKQRITDSKHNPEAKVQEGSDFTYCEVSSEIPITYIDENSIPEDSVIILTAEDMDGLNLEEGRQIIVNSESGQEYVPCAISIEENSNYSQTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118108;
- 90% Identity
- iTF_00963105;
- 80% Identity
- iTF_00118108;