Aplu079470.1
Basic Information
- Insect
- Anthophora plumipes
- Gene Symbol
- -
- Assembly
- GCA_951804975.1
- Location
- OX638111.1:38359857-38364724[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 5.2 3.9e+04 -2.9 0.0 28 38 14 25 14 29 0.81 2 5 1.2e-12 9e-09 37.6 0.0 1 39 399 438 399 442 0.90 3 5 3.6e-12 2.7e-08 36.0 0.1 2 39 454 491 453 494 0.94 4 5 1.3e-18 1e-14 56.6 0.0 2 45 509 553 508 553 0.97 5 5 1.5e-18 1.1e-14 56.4 0.1 1 42 560 602 560 603 0.97
Sequence Information
- Coding Sequence
- ATGCGCGACCAACGTGGAAGTTCGATCACCCTGCAACCAATACCACGAAACTCACTGGCTGTCGAGTACAAAGATTCGCGGACATTTCGACCAGCTTATACGTATTCTCGCAGTGAAACTAGGGGATGGAATAAAGTGCGAAAGAAGGAAGGTGGAAAGAGTGGGGAGGATAGTGACGAGCAACAGAACGAGAGGGAGACCCATAGAGCAAAAGACAGGATGTGTATGTGGAAACGGTTGGAAGTCATATCGGTGCCGGTGCCGTCGCGAGTACCGAGGAGAGGATCGGAGTCCCTGCTGAAAACAGCCGATCAGCTGAAGATCAAAGGACTTTGCGAGGTGCCGGAAAGCAGAGACGGTCCACCCTCGGTGAGTCTTAGTTCCCCGCCGAGAGAACCTGGTACTCCTAGGATAAATTTCACAAAGCTGAAGAGGCATCATCCGAGATACAAGAGAGCAAGGACAACGTTCGAGCCTCGCGCGACCGATTCCAGGCATTACGACCGTTACAAAGAGGAGGAATCGAACGAGAACTATAACCTGGAGAACAAAGAGAACCACAGAGACTGGCAACCCGAAGATGAAGAGTGTACGGAGGCAACCACGGGACCAGTAGTCTTGGAAACTTGCCAACGTAACGCTAACAGCACCGGCATCACCACCACTACCGCcacaaccaccaccaccaccatcgctaccagtaacaataataataacaacagtaACGGCAACAGCAACGGTAACAGCACgaacaacaataataacaacGGTGACATGTTCTGTCATACAGGCCTCGGTCATTACGGTCATCATCCGGATCCCGGGGAGATTGATCTACCTCCAGAGACTCAACCCACACCACCAAGTGCAACATTGGTTGGCACTACGATCACCCATCTAAGAGACCCggatcatcactctacagAGATTCAGAATTGCGACAGTGTAAAGATCAAATTCGAAACGTTACACACGATGGATTCCTCGGACACGATCGACATCGACAGCCACATGTCGGACCGGGCAAGTGTCAGTTCGAAGAATGCGGTCGACAGCGACAACATGATGATGATCACGCCAGAGTTGTTGGGATTAATGCCGTCTGGGAGTTCCATACATTCGGATTCCGGTGAGAATAACTCGAGGGGCCACTCTGGACAGTCGAGCTCTCATCATCACGGCTCGAAATCGTGGACGCAAGAGGATATGGACGCCGCATTGGAGGCTTTACGAAATCACGATATGAGCCTTACGAAAGCTTCCGCTACCTTCGGTATACCCTCGACGACACTATGGCAAAGGGCACATCGACTGGGCATCGACACCCCAAAAAAGGATGGACCCACCAAATCGTGGAGTGACGAGAGTTTAAATAACGCGCTCGAAGCGCTACGGACCGGAACGATATCGGCGAATAAAGCCTCAAAAGCGTTCGGTATACCATCCAGCACACTCTACAAAATTGCAAGGAGAGAAGGAATCAGATTAGCAGCGCCTTTCAACGCCAGTCCTACCACATGGTCACCAGCCGATCTCGATCGGGCCCTCGAAGCGATACGCTCCGGTCAAACGTCCGTGCAAAGAGCGTCCACGGAATTCGGTATACCGACAGGAACGTTGTACGGTCGGTGTAAAAGGGAGGGAATCGAGCTTAGCCGAAGTAATCCTACGCCTTGGAGCGAAGATGCTATGACCGAAGCTCTTGAAGCTGTCAGATTAGGCCATATGAGCATCAATCAAGCGGCCATCCACTATAATTTACCGTACTCTTCTTTGTACGGCCGTTTCAAGAGGGGAAAGTACGAGGAACCGACGGTCGGAGATATATCGCAAGATGGTAGCAGTCCTCACTTCCATCAAAGTCCAAGTCAGAATCATTCGTCCGCCGTTCCAGATCAAATGCCCTACCAAGGCAGCTGA
- Protein Sequence
- MRDQRGSSITLQPIPRNSLAVEYKDSRTFRPAYTYSRSETRGWNKVRKKEGGKSGEDSDEQQNERETHRAKDRMCMWKRLEVISVPVPSRVPRRGSESLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRARTTFEPRATDSRHYDRYKEEESNENYNLENKENHRDWQPEDEECTEATTGPVVLETCQRNANSTGITTTTATTTTTTIATSNNNNNNSNGNSNGNSTNNNNNNGDMFCHTGLGHYGHHPDPGEIDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAVDSDNMMMITPELLGLMPSGSSIHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPTVGDISQDGSSPHFHQSPSQNHSSAVPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00733881;
- 80% Identity
- -